iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024205

Ensembl Protein ID

ENSCSAP00000007407.1

UniProt Accession

A0A0D9RFL8; A0A0D9RFL8_CHLSB

Genbank Protein ID

ENSCSAP00000007407

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01152244

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000011191.1	ENSCSAT00000009281.1	ENSCSAP00000007407.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-57	186.4	519	558
UBD/Beta-Prp	3.10e-98	328.6	414	640

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W l ++ +lk+
   Q: 519  GHRRGLWCVQFsPMdQVLATASADGTIKLWALQDFSCLKT 558
           8999*******977789*******************9986 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...........tgkcvhtlk....ghedsvlslsfspsgdklvsGshdrt 117
           +++ sgh+  v +v++s+ ++ +lvtgs+D t+k+w+l            +g+++   +     h++++ s+++ p+++ l++Gs+drt
   Q: 414  VAQGSGHTHSVGTVCCSRLKEsFLVTGSQDCTVKLWPLPkallskntapdNGPILLQAQttqrCHDKDINSVAIAPNDKLLATGSQDRT 502
           677799**********998778**************5555566666666688888877766668************************* PP
   S: 118  irvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
           +++w l++ q l  ++sgh++  +cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s + dg vkl
   Q: 503  AKLWALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLVKL 589
           ************9.*********************************************9.**************************** PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdl 256
           w ++++ecvrtl +h+d v+ ++ s+ d+r ++g+sD  + +W d++  + 
   Q: 590  WTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVILWkDVTEAEQ 640
           *******************************************87766554 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MAETAAGVGR FKANYAVERK IEPFYKGGKA QLDQTGQHLF CICGTRVNIL EVASGVVLRS 60
LEQEDQEAIT AFDLSPDDEV LVTASRALLL AQWAWREGSV TRLWKAIHTA PVATMAFDPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGTGGGGA CGTCACAGTG GTCGCGCGCG GTGACGCCAT CGCAGCGCGC CGGGAGTGTA 60
GAGTTTTGTG AGGAGTTCGG TCCAACCTCT GTCACGCGGC GGCGGCTGCC GGGGCCCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

KEGG

csab:103226456

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.63	7.00e-144	504.00
IUUC-Aml-002376	Ailuropoda melanoleuca	89.06	0.00e+00	1397.00
IUUC-Atr-002486	Amborella trichopoda	38.27	1.00e-159	556.00
IUUC-Apl-003519	Anas platyrhynchos	60.96	0.00e+00	894.00
IUUC-Aca-004363	Anolis carolinensis	55.99	2.00e-148	518.00
IUUC-Aly-006152	Arabidopsis lyrata	35.21	6.00e-148	518.00
IUUC-Ath-006966	Arabidopsis thaliana	35.23	5.00e-147	514.00
IUUC-Ago-007746	Ashbya gossypii	30.19	1.00e-105	377.00
IUUC-Acl-008009	Aspergillus clavatus	29.27	2.00e-103	370.00
IUUC-Afl-008681	Aspergillus flavus	28.60	7.00e-92	332.00
IUUC-Afu-008798	Aspergillus fumigatus	29.14	4.00e-91	329.00
IUUC-Ani-009278	Aspergillus nidulans	27.46	1.00e-94	340.00
IUUC-Ang-009640	Aspergillus niger	28.93	9.00e-99	355.00
IUUC-Aor-010160	Aspergillus oryzae	28.60	1.00e-91	331.00
IUUC-Ate-010320	Aspergillus terreus	28.83	2.00e-102	367.00
IUUC-Ame-010930	Astyanax mexicanus	60.70	3.00e-74	270.00
IUUC-Bgr-012054	Blumeria graminis	28.54	7.00e-104	372.00
IUUC-Bta-012611	Bos taurus	89.73	0.00e+00	1399.00
IUUC-Bci-013797	Botrytis cinerea	30.40	4.00e-112	399.00
IUUC-Bdi-014384	Brachypodium distachyon	38.21	1.00e-161	563.00
IUUC-Bol-016483	Brassica oleracea	35.38	5.00e-148	518.00
IUUC-Bra-017798	Brassica rapa	36.12	3.00e-147	515.00
IUUC-Cel-018664	Caenorhabditis elegans	30.72	3.00e-117	416.00
IUUC-Cja-019092	Callithrix jacchus	94.42	0.00e+00	1526.00
IUUC-Cfa-021040	Canis familiaris	88.82	0.00e+00	1404.00
IUUC-Cpo-022529	Cavia porcellus	90.59	0.00e+00	1421.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	59.54	2.00e-46	177.00
IUUC-Cin-025560	Ciona intestinalis	45.01	0.00e+00	718.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.58	8.00e-113	401.00
IUUC-Cne-027082	Cryptococcus neoformans	30.73	5.00e-114	405.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.83	1.00e-30	129.00
IUUC-Dre-028138	Danio rerio	52.62	0.00e+00	875.00
IUUC-Dno-029914	Dasypus novemcinctus	66.48	0.00e+00	828.00
IUUC-Dor-030685	Dipodomys ordii	78.18	0.00e+00	941.00
IUUC-Dse-031429	Dothistroma septosporum	28.98	2.00e-97	350.00
IUUC-Dme-031995	Drosophila melanogaster	31.98	1.00e-118	420.00
IUUC-Ete-033086	Echinops telfairi	89.93	0.00e+00	792.00
IUUC-Eca-034354	Equus caballus	91.79	0.00e+00	1418.00
IUUC-Eeu-034832	Erinaceus europaeus	87.27	0.00e+00	826.00
IUUC-Fca-036136	Felis catus	83.08	0.00e+00	1317.00
IUUC-Fal-036859	Ficedula albicollis	64.69	0.00e+00	1034.00
IUUC-Fox-037863	Fusarium oxysporum	30.59	2.00e-100	360.00
IUUC-Fso-038389	Fusarium solani	30.25	4.00e-111	395.00
IUUC-Gmo-038711	Gadus morhua	57.30	0.00e+00	903.00
IUUC-Ggr-039820	Gaeumannomyces graminis	29.13	6.00e-103	369.00
IUUC-Gga-040263	Gallus gallus	64.92	0.00e+00	1078.00
IUUC-Gac-041291	Gasterosteus aculeatus	59.56	0.00e+00	1015.00
IUUC-Gma-044026	Glycine max	38.85	6.00e-166	578.00
IUUC-Ggo-044693	Gorilla gorilla	96.53	0.00e+00	1531.00
IUUC-Hsa-046048	Homo sapiens	96.66	0.00e+00	1534.00
IUUC-Hvu-047608	Hordeum vulgare	37.38	1.00e-159	557.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	90.71	0.00e+00	1489.00
IUUC-Kpa-049209	Komagataella pastoris	32.66	1.00e-119	423.00
IUUC-Lch-050085	Latimeria chalumnae	61.67	0.00e+00	989.00
IUUC-Lpe-050945	Leersia perrieri	38.48	5.00e-158	551.00
IUUC-Loc-052679	Lepisosteus oculatus	63.30	0.00e+00	1077.00
IUUC-Laf-053685	Loxodonta africana	87.96	0.00e+00	1348.00
IUUC-Mcc-055861	Macaca mulatta	98.51	0.00e+00	1556.00
IUUC-Meu-056820	Macropus eugenii	69.97	0.00e+00	954.00
IUUC-Mor-057234	Magnaporthe oryzae	28.30	8.00e-101	361.00
IUUC-Mpo-057456	Magnaporthe poae	29.77	1.00e-82	301.00
IUUC-Mtr-058122	Medicago truncatula	39.29	3.00e-166	578.00
IUUC-Mla-058980	Melampsora laricipopulina	28.79	9.00e-98	351.00
IUUC-Mga-060080	Meleagris gallopavo	62.75	0.00e+00	1066.00
IUUC-Mvi-060338	Microbotryum violaceum	35.10	2.00e-141	496.00
IUUC-Mmr-060762	Microcebus murinus	92.19	0.00e+00	1452.00
IUUC-Mdo-061975	Monodelphis domestica	73.41	0.00e+00	1155.00
IUUC-Mmu-064038	Mus musculus	89.24	0.00e+00	1408.00
IUUC-Mac-065189	Musa acuminata	36.45	3.00e-157	549.00
IUUC-Mpu-066526	Mustela putorius furo	89.23	0.00e+00	1392.00
IUUC-Mlu-067716	Myotis lucifugus	89.43	0.00e+00	1480.00
IUUC-Nfi-068474	Neosartorya fischeri	29.60	2.00e-94	340.00
IUUC-Ncr-068826	Neurospora crassa	27.76	8.00e-95	341.00
IUUC-Nle-069832	Nomascus leucogenys	96.78	0.00e+00	1570.00
IUUC-Opr-071183	Ochotona princeps	82.68	0.00e+00	1305.00
IUUC-Ont-072371	Oreochromis niloticus	61.48	0.00e+00	1014.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.17	0.00e+00	936.00
IUUC-Oba-075963	Oryza barthii	37.99	2.00e-160	559.00
IUUC-Obr-076173	Oryza brachyantha	39.02	1.00e-160	560.00
IUUC-Ogl-077692	Oryza glaberrima	37.99	3.00e-160	559.00
IUUC-Ogu-078965	Oryza glumaepatula	37.99	2.00e-160	559.00
IUUC-Oin-079708	Oryza indica	37.99	8.00e-161	561.00
IUUC-Olo-080679	Oryza longistaminata	37.67	6.00e-158	551.00
IUUC-Oni-082960	Oryza nivara	37.86	2.00e-160	560.00
IUUC-Opu-083282	Oryza punctata	37.93	2.00e-153	536.00
IUUC-Oru-085224	Oryza rufipogon	37.99	1.00e-160	560.00
IUUC-Osa-085320	Oryza sativa	37.99	1.00e-160	560.00
IUUC-Ola-086370	Oryzias latipes	57.22	8.00e-131	461.00
IUUC-Olu-087814	Ostreococcus lucimarinus	31.70	2.00e-100	360.00
IUUC-Oga-088458	Otolemur garnettii	88.53	0.00e+00	1491.00
IUUC-Oar-090032	Ovis aries	80.85	0.00e+00	985.00
IUUC-Ptr-090749	Pan troglodytes	95.67	0.00e+00	1513.00
IUUC-Pan-091691	Papio anubis	94.93	0.00e+00	1489.00
IUUC-Psi-093200	Pelodiscus sinensis	64.51	0.00e+00	1057.00
IUUC-Pma-094165	Petromyzon marinus	53.12	0.00e+00	652.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.55	1.00e-89	323.00
IUUC-Ppa-095336	Physcomitrella patens	39.48	4.00e-159	555.00
IUUC-Pfo-096132	Poecilia formosa	61.08	0.00e+00	984.00
IUUC-Pab-097855	Pongo abelii	96.29	0.00e+00	1562.00
IUUC-Pop-099434	Populus trichocarpa	36.52	1.00e-151	530.00
IUUC-Pca-100232	Procavia capensis	85.11	7.00e-165	574.00
IUUC-Ppe-101665	Prunus persica	36.33	5.00e-157	548.00
IUUC-Pva-102178	Pteropus vampyrus	89.96	0.00e+00	1430.00
IUUC-Pgr-103288	Puccinia graminis	31.28	9.00e-85	308.00
IUUC-Ptt-103808	Puccinia triticina	31.62	5.00e-86	312.00
IUUC-Pte-104205	Pyrenophora teres	30.15	4.00e-106	379.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	28.97	2.00e-96	347.00
IUUC-Rno-105617	Rattus norvegicus	89.48	0.00e+00	1407.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.18	9.00e-107	381.00
IUUC-Sha-107378	Sarcophilus harrisii	73.70	0.00e+00	1141.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.22	5.00e-121	428.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.29	3.00e-118	419.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	31.08	6.00e-115	408.00
IUUC-Smo-109257	Selaginella moellendorffii	39.33	7.00e-158	551.00
IUUC-Sit-110258	Setaria italica	37.08	5.00e-162	565.00
IUUC-Sly-111521	Solanum lycopersicum	36.40	2.00e-152	533.00
IUUC-Stu-112718	Solanum tuberosum	46.43	6.00e-34	135.00
IUUC-Sar-113586	Sorex araneus	79.10	2.00e-64	239.00
IUUC-Sbi-114768	Sorghum bicolor	38.31	3.00e-165	575.00
IUUC-Sre-115159	Sporisorium reilianum	33.66	5.00e-97	349.00
IUUC-Ssc-116342	Sus scrofa	68.73	0.00e+00	940.00
IUUC-Tgu-117320	Taeniopygia guttata	63.30	0.00e+00	1000.00
IUUC-Tru-118024	Takifugu rubripes	59.98	0.00e+00	971.00
IUUC-Tni-119971	Tetraodon nigroviridis	60.66	0.00e+00	978.00
IUUC-Tca-121248	Theobroma cacao	37.47	1.00e-157	550.00
IUUC-Tre-122079	Trichoderma reesei	30.22	1.00e-102	367.00
IUUC-Tvi-122554	Trichoderma virens	29.56	8.00e-102	365.00
IUUC-Tae-123552	Triticum aestivum	38.07	2.00e-162	566.00
IUUC-Tur-126436	Triticum urartu	36.69	4.00e-131	461.00
IUUC-Tme-126942	Tuber melanosporum	31.81	5.00e-112	398.00
IUUC-Tbe-128000	Tupaia belangeri	91.93	1.00e-86	314.00
IUUC-Ttr-128964	Tursiops truncatus	87.83	0.00e+00	1407.00
IUUC-Uma-129473	Ustilago maydis	32.32	4.00e-104	372.00
IUUC-Vda-129749	Verticillium dahliae	30.39	1.00e-96	347.00
IUUC-Vvi-131511	Vitis vinifera	39.15	1.00e-159	556.00
IUUC-Xtr-132816	Xenopus tropicalis	54.61	0.00e+00	881.00
IUUC-Xma-133672	Xiphophorus maculatus	61.40	0.00e+00	1018.00
IUUC-Yli-134602	Yarrowia lipolytica	34.64	2.00e-135	476.00
IUUC-Zma-135976	Zea mays	37.38	9.00e-157	547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence