iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126329

Ensembl Protein ID

TRIUR3_30915-P1

UniProt Accession

M7ZUW7; M7ZUW7_TRIUA

Genbank Protein ID

EMS63431.1

Protein Name

Cleavage stimulation factor subunit 1

Genbank Nucleotide ID

KD069190

Gene Name

TRIUR3_30915

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_30915	TRIUR3_30915-T1	TRIUR3_30915-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-28	95.8	394	424
UBD/Beta-Prp	2.00e-53	182.2	336	602

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H  ++++l+f   s ++l+sG+ D+tik +D+
   Q: 394  HVQPINDLDFhpiS-PILISGAKDNTIKFFDF 424
           999*******9775.9***************6 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdls...t 83
           ++hk+v +c kfspd++++atgs d +ik ++v++ k               +r++++h +++++++f+p ++il++g++D+tik +d+s   +
   Q: 336  SDHKNVARCAKFSPDGKYFATGSGDTSIKFFEVSKIKQtmlgdskegsgrpvVRTFYDHVQPINDLDFHPISPILISGAKDNTIKFFDFSktaA 429
           5799******************************999899***********************************************9996667 PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           +k +++++  +++v+s+ f+p gd++++G+++ +++++d++t +c+ +   +  ++++n v+++++g+++v++s+D+ +r+Wd  +++++r   
   Q: 430  RKAFRVIQ-DTHNVRSVCFHPCGDYILAGTDHPVAHLYDVNTFTCFLSaNPQDSSAAINQVRYSGTGSMYVTASKDGSLRIWDGVSAECIRPII 522
           77777777.*************************************98777788899************************************* PP
   S: 177  gghtdsvysls..fdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfs.pnderlvsgs.sDgsiriWdlr 252
           g  ++sv+ +s  f+++ ++++s ++d+ +klw++ tg+ v+++ g  ++++++ +++ + +e+++s+  + + + iWd  
   Q: 523  G-AHGSVEATSaiFTKDERYILSSGKDSCIKLWEVGTGRLVKQYPGgVNTQFRCQAAFnETEEFVLSTDeQNNEVVIWDAL 602
           9.67777666667*******************************996455565555552666777777666677888*965 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MDTSTRAAKI PSLPQQTEIN WDNLDMTKLY VVGAGMFSCV TVALYPVSVI KTRMQVASGE 60
AMRRNALATF KNILKVDGVP GLYRGFGTVI TGAIPARIIF LTALEKTKAT SLKLVEPLQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACACCT CTACTAGGGC GGCCAAGATC CCCTCCCTCC CCCAACAGAC GGAGATCAAC 60
TGGGACAAGT AAGCGCGCGC TCCCGAGTAT CTAGTTGTTA ATCTCCCCGC CTCCCCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR002067--Mit_carrier
IPR018108--Mitochondrial_sb/sol_carrier
IPR023395--Mt_carrier_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50920--SOLCAR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00153--Mito_carr
PF00400--WD40

PRINTS

PR00926--MITOCARRIER

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0055085--P:transmembrane transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	44.81	5.00e-84	303.00
IUUC-Atr-002687	Amborella trichopoda	60.21	6.00e-138	483.00
IUUC-Apl-003438	Anas platyrhynchos	44.81	9.00e-85	306.00
IUUC-Aca-005178	Anolis carolinensis	45.10	8.00e-85	306.00
IUUC-Aly-005791	Arabidopsis lyrata	58.31	1.00e-137	481.00
IUUC-Ath-006689	Arabidopsis thaliana	65.67	4.00e-139	486.00
IUUC-Ame-011217	Astyanax mexicanus	46.24	1.00e-72	265.00
IUUC-Bta-012619	Bos taurus	44.81	6.00e-84	303.00
IUUC-Bdi-014515	Brachypodium distachyon	85.80	4.00e-177	612.00
IUUC-Bra-017450	Brassica rapa	59.07	8.00e-131	459.00
IUUC-Cel-018151	Caenorhabditis elegans	42.41	1.00e-73	269.00
IUUC-Cja-019304	Callithrix jacchus	44.81	2.00e-84	305.00
IUUC-Cfa-020208	Canis familiaris	44.81	5.00e-84	303.00
IUUC-Cpo-022245	Cavia porcellus	44.81	5.00e-84	303.00
IUUC-Csa-023066	Chlorocebus sabaeus	44.81	2.00e-84	305.00
IUUC-Cho-024770	Choloepus hoffmanni	44.81	9.00e-84	302.00
IUUC-Cin-025621	Ciona intestinalis	40.96	2.00e-71	261.00
IUUC-Csv-026071	Ciona savignyi	43.16	7.00e-78	283.00
IUUC-Dre-028254	Danio rerio	42.90	4.00e-80	290.00
IUUC-Dno-029903	Dasypus novemcinctus	44.81	5.00e-84	303.00
IUUC-Dor-030423	Dipodomys ordii	44.81	5.00e-84	303.00
IUUC-Dme-031993	Drosophila melanogaster	41.23	2.00e-71	261.00
IUUC-Eca-033316	Equus caballus	44.81	5.00e-84	303.00
IUUC-Eeu-035001	Erinaceus europaeus	43.92	5.00e-82	297.00
IUUC-Fca-036447	Felis catus	44.81	5.00e-84	303.00
IUUC-Fal-037601	Ficedula albicollis	44.81	9.00e-85	306.00
IUUC-Gmo-038531	Gadus morhua	41.12	4.00e-77	280.00
IUUC-Gga-040869	Gallus gallus	44.81	1.00e-84	305.00
IUUC-Gac-042380	Gasterosteus aculeatus	42.77	2.00e-80	291.00
IUUC-Gma-043478	Glycine max	71.21	3.00e-151	527.00
IUUC-Ggo-045302	Gorilla gorilla	44.81	2.00e-84	305.00
IUUC-Hsa-045678	Homo sapiens	44.81	2.00e-84	305.00
IUUC-Hvu-047301	Hordeum vulgare	95.50	0.00e+00	678.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	44.81	5.00e-84	303.00
IUUC-Lch-050319	Latimeria chalumnae	44.81	4.00e-84	303.00
IUUC-Lpe-051440	Leersia perrieri	69.35	5.00e-158	550.00
IUUC-Loc-052035	Lepisosteus oculatus	43.62	3.00e-82	298.00
IUUC-Laf-054275	Loxodonta africana	44.81	5.00e-84	303.00
IUUC-Mcc-055857	Macaca mulatta	39.05	5.00e-62	230.00
IUUC-Mtr-058667	Medicago truncatula	69.81	1.00e-143	501.00
IUUC-Mga-059710	Meleagris gallopavo	44.81	1.00e-84	305.00
IUUC-Mmr-060604	Microcebus murinus	44.81	5.00e-84	303.00
IUUC-Mdo-062953	Monodelphis domestica	44.81	5.00e-84	303.00
IUUC-Mmu-064292	Mus musculus	44.51	7.00e-84	303.00
IUUC-Mac-064568	Musa acuminata	75.84	5.00e-155	539.00
IUUC-Mpu-066294	Mustela putorius furo	48.15	2.00e-56	212.00
IUUC-Mlu-067279	Myotis lucifugus	45.10	4.00e-85	307.00
IUUC-Nle-069322	Nomascus leucogenys	44.81	2.00e-84	305.00
IUUC-Opr-070580	Ochotona princeps	44.81	5.00e-84	303.00
IUUC-Ont-072554	Oreochromis niloticus	43.92	2.00e-82	298.00
IUUC-Oan-072856	Ornithorhynchus anatinus	45.10	2.00e-84	305.00
IUUC-Ocu-074150	Oryctolagus cuniculus	45.95	1.00e-66	246.00
IUUC-Oba-075585	Oryza barthii	73.46	1.00e-159	555.00
IUUC-Obr-076069	Oryza brachyantha	84.29	1.00e-172	598.00
IUUC-Ogl-077045	Oryza glaberrima	83.99	2.00e-177	613.00
IUUC-Ogu-078697	Oryza glumaepatula	83.54	1.00e-169	590.00
IUUC-Oin-080119	Oryza indica	83.99	2.00e-177	613.00
IUUC-Olo-081093	Oryza longistaminata	70.81	0.00e+00	901.00
IUUC-Ome-081718	Oryza meridionalis	86.73	2.00e-148	518.00
IUUC-Oni-082072	Oryza nivara	73.46	1.00e-159	555.00
IUUC-Opu-084080	Oryza punctata	70.69	2.00e-140	490.00
IUUC-Oru-085070	Oryza rufipogon	76.32	3.00e-159	555.00
IUUC-Osa-086149	Oryza sativa	83.99	2.00e-177	613.00
IUUC-Ola-086697	Oryzias latipes	43.03	2.00e-81	295.00
IUUC-Oga-088697	Otolemur garnettii	44.81	5.00e-84	303.00
IUUC-Oar-089774	Ovis aries	44.81	6.00e-84	303.00
IUUC-Ptr-090924	Pan troglodytes	44.81	2.00e-84	305.00
IUUC-Pan-092373	Papio anubis	44.81	3.00e-84	305.00
IUUC-Psi-094001	Pelodiscus sinensis	44.81	3.00e-84	304.00
IUUC-Pma-094274	Petromyzon marinus	39.41	1.00e-74	272.00
IUUC-Ppa-095562	Physcomitrella patens	66.86	3.00e-144	503.00
IUUC-Pfo-097235	Poecilia formosa	43.92	1.00e-81	295.00
IUUC-Pab-098608	Pongo abelii	44.81	2.00e-84	305.00
IUUC-Pca-100268	Procavia capensis	44.81	6.00e-84	303.00
IUUC-Ppe-101425	Prunus persica	70.87	3.00e-149	520.00
IUUC-Pva-103183	Pteropus vampyrus	44.81	5.00e-84	303.00
IUUC-Rno-105097	Rattus norvegicus	44.51	7.00e-84	303.00
IUUC-Sha-107642	Sarcophilus harrisii	44.81	5.00e-84	303.00
IUUC-Smo-108680	Selaginella moellendorffii	60.23	3.00e-128	451.00
IUUC-Sit-110471	Setaria italica	84.89	2.00e-180	625.00
IUUC-Sly-111143	Solanum lycopersicum	70.63	1.00e-61	228.00
IUUC-Stu-111926	Solanum tuberosum	72.50	2.00e-69	253.00
IUUC-Sar-112947	Sorex araneus	45.91	2.00e-66	244.00
IUUC-Sbi-113769	Sorghum bicolor	83.78	2.00e-179	620.00
IUUC-Ssc-115736	Sus scrofa	44.81	5.00e-84	303.00
IUUC-Tgu-117457	Taeniopygia guttata	44.81	9.00e-85	306.00
IUUC-Tru-117760	Takifugu rubripes	43.62	2.00e-82	298.00
IUUC-Tsy-118943	Tarsius syrichta	44.51	2.00e-80	292.00
IUUC-Tni-120081	Tetraodon nigroviridis	43.62	2.00e-82	298.00
IUUC-Tca-121190	Theobroma cacao	73.03	1.00e-155	541.00
IUUC-Tae-125535	Triticum aestivum	97.89	0.00e+00	690.00
IUUC-Tbe-127878	Tupaia belangeri	44.51	1.00e-82	299.00
IUUC-Ttr-128985	Tursiops truncatus	44.81	5.00e-84	303.00
IUUC-Vpa-130147	Vicugna pacos	44.81	7.00e-84	303.00
IUUC-Vvi-130935	Vitis vinifera	72.46	8.00e-155	539.00
IUUC-Xtr-132482	Xenopus tropicalis	44.51	6.00e-84	303.00
IUUC-Xma-133929	Xiphophorus maculatus	43.92	1.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence