iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087179

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04072392

Gene Name

trim3b; LOC101169131

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000004188.1	ENSORLT00000005244.1	ENSORLP00000005243.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	34.4	25	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++++ p+vlpC H+f+++Clq++  ++  +s + +CP+Cr
   Q: 25   CSICLDHYCN-PKVLPCLHTFCESCLQNY-IPP--ESLTLSCPVCR 66
           **********.******************.666..9*********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

SVMAKREAGS TSPVVRQIDK QFLVCSICLD HYCNPKVLPC LHTFCESCLQ NYIPPESLTL 60
SCPVCRQTSI LPEKGVCALQ NNFFITNLME VLQREPECSR PEACSVLESV SAAAAGKPLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGTCATGG CAAAGCGTGA GGCGGGGAGT ACCAGCCCTG TGGTGCGTCA GATAGATAAG 60
CAGTTTCTGG TCTGTAGCAT CTGTCTGGAT CACTACTGCA ACCCGAAGGT CCTCCCCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR003649--Bbox_C
IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR001258--NHL_repeat
IPR013017--NHL_repeat_subgr
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50194--FILAMIN_REPEAT
PS51125--NHL
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00630--Filamin
PF01436--NHL
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00557--IG_FLMN
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001769	Ailuropoda melanoleuca	75.33	0.00e+00	1159.00
IUUC-Ame-011937	Astyanax mexicanus	76.49	0.00e+00	1158.00
IUUC-Bta-013091	Bos taurus	75.33	0.00e+00	1177.00
IUUC-Cja-019116	Callithrix jacchus	74.93	0.00e+00	1173.00
IUUC-Cfa-020946	Canis familiaris	75.20	0.00e+00	1177.00
IUUC-Cpo-021747	Cavia porcellus	75.20	0.00e+00	1177.00
IUUC-Csa-023901	Chlorocebus sabaeus	74.93	0.00e+00	1170.00
IUUC-Dre-028509	Danio rerio	86.46	0.00e+00	1386.00
IUUC-Dno-029414	Dasypus novemcinctus	75.10	0.00e+00	1180.00
IUUC-Ete-032776	Echinops telfairi	74.67	0.00e+00	1164.00
IUUC-Eca-034308	Equus caballus	75.33	0.00e+00	1179.00
IUUC-Eeu-034845	Erinaceus europaeus	68.67	0.00e+00	1042.00
IUUC-Fca-035594	Felis catus	75.20	0.00e+00	1176.00
IUUC-Gga-040515	Gallus gallus	80.88	0.00e+00	1256.00
IUUC-Gac-042506	Gasterosteus aculeatus	93.87	0.00e+00	1437.00
IUUC-Ggo-045603	Gorilla gorilla	75.07	0.00e+00	1174.00
IUUC-Hsa-046416	Homo sapiens	75.20	0.00e+00	1176.00
IUUC-Itr-048448	Ictidomys tridecemlineatus	75.33	0.00e+00	1177.00
IUUC-Lch-050005	Latimeria chalumnae	75.39	0.00e+00	1191.00
IUUC-Loc-052433	Lepisosteus oculatus	87.50	0.00e+00	1410.00
IUUC-Laf-053930	Loxodonta africana	74.67	0.00e+00	1168.00
IUUC-Mcc-055778	Macaca mulatta	75.07	0.00e+00	1172.00
IUUC-Meu-056100	Macropus eugenii	75.99	0.00e+00	1118.00
IUUC-Mmr-060733	Microcebus murinus	75.07	0.00e+00	1175.00
IUUC-Mdo-062705	Monodelphis domestica	77.07	0.00e+00	1202.00
IUUC-Mmu-063965	Mus musculus	75.33	0.00e+00	1177.00
IUUC-Mpu-066757	Mustela putorius furo	75.20	0.00e+00	1177.00
IUUC-Ont-071250	Oreochromis niloticus	96.39	0.00e+00	1470.00
IUUC-Ocu-074675	Oryctolagus cuniculus	75.30	0.00e+00	1182.00
IUUC-Oga-089121	Otolemur garnettii	75.20	0.00e+00	1177.00
IUUC-Ptr-090907	Pan troglodytes	75.20	0.00e+00	1176.00
IUUC-Pan-092076	Papio anubis	75.07	0.00e+00	1172.00
IUUC-Ppa-095483	Physcomitrella patens	21.78	4.00e-09	57.00
IUUC-Pfo-097324	Poecilia formosa	92.78	0.00e+00	1449.00
IUUC-Pva-103232	Pteropus vampyrus	75.07	0.00e+00	1153.00
IUUC-Rno-104998	Rattus norvegicus	75.20	0.00e+00	1176.00
IUUC-Sha-107604	Sarcophilus harrisii	77.20	0.00e+00	1204.00
IUUC-Sar-113243	Sorex araneus	67.47	0.00e+00	630.00
IUUC-Tsy-119487	Tarsius syrichta	78.17	0.00e+00	843.00
IUUC-Tni-120733	Tetraodon nigroviridis	94.40	0.00e+00	1456.00
IUUC-Vvi-131620	Vitis vinifera	36.99	1.00e-05	42.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence