iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027759

Ensembl Protein ID

ENSDARP00000138300.1

UniProt Accession

Q6IQC6; Q6IQC6_DANRE

Genbank Protein ID

AAH71482.1

Protein Name

Proteasome 26S subunit, non-ATPase 4a; Zgc:86833

Genbank Nucleotide ID

CU855694

Gene Name

psmd4a; psmd4; zgc:86833

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000101295.1	ENSDART00000160438.1	ENSDARP00000138300.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	42.97	3.00e-69	259.00	IUUC-Ath-007436
UBD/Alpha-Helix/UIM	54.08	1.00e-106	383.00	IUUC-Dme-032000
UBD/Alpha-Helix/UIM	87.05	3.00e-172	602.00	IUUC-Hsa-045850
UBD/Alpha-Helix/UIM	49.58	2.00e-55	211.00	IUUC-Sce-106427

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MVLESTMVCV DNSEYMRNGD FLPTRLQAQQ DAVNIVCHSK TRSNPENNVG LITMANNCEV 60
LTTLTPDTGR ILSKLHAVQP LGKISFCTGI RVAHLALKHR QGKNHKMRIV AFVGSPVEDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAATCAGCG ACGCTGTCAC TTGGAGAACA GAACTAGAAG ATTTCCAAGA TGGTGCTGGA 60
AAGTACTATG GTCTGGTAAG AAATAAACAA ACGCTTTACG TACGCTTAAT GCGTATTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0031593--F:polyubiquitin binding
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

dre:415202

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001241	Ailuropoda melanoleuca	86.78	2.00e-162	565.00
IUUC-Atr-002938	Amborella trichopoda	41.42	8.00e-67	247.00
IUUC-Apl-003881	Anas platyrhynchos	92.82	8.00e-108	382.00
IUUC-Aca-004397	Anolis carolinensis	93.31	7.00e-120	423.00
IUUC-Aly-005564	Arabidopsis lyrata	41.39	2.00e-57	216.00
IUUC-Ath-007436	Arabidopsis thaliana	42.22	3.00e-56	212.00
IUUC-Ago-007858	Ashbya gossypii	51.74	4.00e-59	221.00
IUUC-Afl-008689	Aspergillus flavus	45.89	3.00e-39	155.00
IUUC-Afu-008959	Aspergillus fumigatus	45.85	4.00e-39	155.00
IUUC-Ani-009344	Aspergillus nidulans	42.49	8.00e-24	103.00
IUUC-Aor-009906	Aspergillus oryzae	43.68	6.00e-25	107.00
IUUC-Ate-010267	Aspergillus terreus	43.58	1.00e-30	127.00
IUUC-Ame-011018	Astyanax mexicanus	95.00	0.00e+00	653.00
IUUC-Bta-013066	Bos taurus	87.05	2.00e-162	565.00
IUUC-Bdi-014537	Brachypodium distachyon	39.80	2.00e-57	216.00
IUUC-Cel-018187	Caenorhabditis elegans	44.92	6.00e-68	251.00
IUUC-Cja-019738	Callithrix jacchus	81.15	9.00e-161	559.00
IUUC-Cfa-020362	Canis familiaris	86.78	1.00e-162	565.00
IUUC-Cpo-021297	Cavia porcellus	86.72	4.00e-156	545.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	49.58	1.00e-45	176.00
IUUC-Cho-024800	Choloepus hoffmanni	73.39	3.00e-39	155.00
IUUC-Csv-026297	Ciona savignyi	56.35	5.00e-99	354.00
IUUC-Cne-027027	Cryptococcus neoformans	47.58	2.00e-49	189.00
IUUC-Dno-029528	Dasypus novemcinctus	81.15	9.00e-161	559.00
IUUC-Dor-030255	Dipodomys ordii	80.11	3.00e-154	537.00
IUUC-Dme-032000	Drosophila melanogaster	68.00	5.00e-87	314.00
IUUC-Ete-032762	Echinops telfairi	85.79	6.00e-161	560.00
IUUC-Eca-034399	Equus caballus	85.04	5.00e-159	555.00
IUUC-Eeu-035072	Erinaceus europaeus	83.55	6.00e-124	437.00
IUUC-Fca-035993	Felis catus	79.55	2.00e-153	535.00
IUUC-Fal-037623	Ficedula albicollis	63.71	2.00e-114	405.00
IUUC-Gmo-039290	Gadus morhua	84.66	9.00e-156	543.00
IUUC-Gga-040288	Gallus gallus	85.95	2.00e-160	558.00
IUUC-Gac-042587	Gasterosteus aculeatus	89.94	1.00e-176	613.00
IUUC-Ggo-044628	Gorilla gorilla	81.15	9.00e-161	559.00
IUUC-Hsa-045850	Homo sapiens	87.05	7.00e-166	576.00
IUUC-Itr-048388	Ictidomys tridecemlineatus	85.83	3.00e-157	547.00
IUUC-Lch-050472	Latimeria chalumnae	85.88	9.00e-157	547.00
IUUC-Lpe-051233	Leersia perrieri	49.15	1.00e-48	189.00
IUUC-Loc-052437	Lepisosteus oculatus	58.50	1.00e-106	381.00
IUUC-Laf-053504	Loxodonta africana	81.42	3.00e-161	561.00
IUUC-Mcc-054877	Macaca mulatta	81.15	2.00e-160	558.00
IUUC-Meu-056114	Macropus eugenii	85.75	1.00e-162	565.00
IUUC-Mor-057212	Magnaporthe oryzae	45.57	3.00e-43	168.00
IUUC-Mtr-058520	Medicago truncatula	40.15	8.00e-56	211.00
IUUC-Mga-059537	Meleagris gallopavo	85.12	8.00e-162	563.00
IUUC-Mvi-060277	Microbotryum violaceum	36.36	2.00e-38	152.00
IUUC-Mmr-061736	Microcebus murinus	85.95	2.00e-161	561.00
IUUC-Mdo-062403	Monodelphis domestica	85.63	5.00e-158	551.00
IUUC-Mmu-063937	Mus musculus	83.56	4.00e-156	544.00
IUUC-Mac-065367	Musa acuminata	39.12	7.00e-61	228.00
IUUC-Mpu-065901	Mustela putorius furo	86.78	3.00e-162	564.00
IUUC-Mlu-067994	Myotis lucifugus	86.23	3.00e-164	570.00
IUUC-Ncr-068760	Neurospora crassa	49.16	2.00e-52	199.00
IUUC-Nle-069463	Nomascus leucogenys	81.15	1.00e-160	559.00
IUUC-Opr-070298	Ochotona princeps	80.60	2.00e-160	558.00
IUUC-Ont-072615	Oreochromis niloticus	94.21	0.00e+00	657.00
IUUC-Ocu-074141	Oryctolagus cuniculus	86.07	2.00e-160	558.00
IUUC-Oba-075955	Oryza barthii	49.15	2.00e-49	189.00
IUUC-Obr-076545	Oryza brachyantha	47.46	6.00e-48	185.00
IUUC-Ogl-077252	Oryza glaberrima	48.73	4.00e-47	182.00
IUUC-Ogu-078986	Oryza glumaepatula	49.15	3.00e-49	189.00
IUUC-Oin-080166	Oryza indica	48.07	2.00e-47	183.00
IUUC-Olo-080390	Oryza longistaminata	48.48	5.00e-46	180.00
IUUC-Ome-082015	Oryza meridionalis	49.15	2.00e-49	189.00
IUUC-Oni-082397	Oryza nivara	49.15	2.00e-49	189.00
IUUC-Opu-083674	Oryza punctata	49.15	2.00e-49	190.00
IUUC-Oru-085199	Oryza rufipogon	49.15	2.00e-49	189.00
IUUC-Osa-085911	Oryza sativa	49.15	2.00e-49	189.00
IUUC-Ola-087383	Oryzias latipes	92.11	2.00e-180	626.00
IUUC-Olu-087857	Ostreococcus lucimarinus	48.42	4.00e-45	174.00
IUUC-Oga-088882	Otolemur garnettii	85.88	2.00e-156	545.00
IUUC-Oar-089311	Ovis aries	87.33	5.00e-163	566.00
IUUC-Ptr-090931	Pan troglodytes	87.05	7.00e-166	576.00
IUUC-Pan-092286	Papio anubis	87.05	8.00e-166	576.00
IUUC-Psi-093908	Pelodiscus sinensis	80.56	1.00e-152	532.00
IUUC-Pma-094737	Petromyzon marinus	76.74	2.00e-140	491.00
IUUC-Pno-094807	Phaeosphaeria nodorum	50.84	2.00e-53	202.00
IUUC-Ppa-095749	Physcomitrella patens	48.76	3.00e-53	202.00
IUUC-Pfo-097212	Poecilia formosa	92.52	0.00e+00	641.00
IUUC-Pab-097708	Pongo abelii	86.72	4.00e-160	557.00
IUUC-Pop-099138	Populus trichocarpa	40.40	1.00e-63	237.00
IUUC-Pca-100722	Procavia capensis	94.62	8.00e-62	231.00
IUUC-Pva-103185	Pteropus vampyrus	85.52	8.00e-160	556.00
IUUC-Pgr-103361	Puccinia graminis	39.42	6.00e-31	128.00
IUUC-Ptt-103848	Puccinia triticina	34.94	3.00e-14	72.40
IUUC-Rno-104906	Rattus norvegicus	86.34	4.00e-163	567.00
IUUC-Sce-106427	Saccharomyces cerevisiae	49.15	6.00e-56	210.00
IUUC-Sha-106574	Sarcophilus harrisii	86.03	8.00e-163	566.00
IUUC-Smo-109639	Selaginella moellendorffii	41.50	2.00e-58	219.00
IUUC-Sar-113015	Sorex araneus	94.64	3.00e-95	341.00
IUUC-Sbi-114495	Sorghum bicolor	50.42	3.00e-50	192.00
IUUC-Sre-114891	Sporisorium reilianum	55.17	2.00e-60	226.00
IUUC-Ssc-116142	Sus scrofa	87.05	1.00e-165	575.00
IUUC-Tgu-116946	Taeniopygia guttata	82.74	1.00e-118	419.00
IUUC-Tru-118485	Takifugu rubripes	91.22	3.00e-178	619.00
IUUC-Tsy-119004	Tarsius syrichta	83.82	8.00e-127	446.00
IUUC-Tni-120074	Tetraodon nigroviridis	92.52	0.00e+00	635.00
IUUC-Tur-126420	Triticum urartu	48.31	1.00e-51	197.00
IUUC-Tme-126937	Tuber melanosporum	52.32	6.00e-54	204.00
IUUC-Tbe-128080	Tupaia belangeri	79.51	7.00e-157	546.00
IUUC-Ttr-128811	Tursiops truncatus	81.15	9.00e-161	559.00
IUUC-Uma-129436	Ustilago maydis	55.17	4.00e-61	228.00
IUUC-Vpa-130762	Vicugna pacos	94.59	1.00e-62	233.00
IUUC-Vvi-130840	Vitis vinifera	48.95	4.00e-55	208.00
IUUC-Xtr-131967	Xenopus tropicalis	82.96	3.00e-104	371.00
IUUC-Xma-134224	Xiphophorus maculatus	91.69	0.00e+00	635.00
IUUC-Zma-135870	Zea mays	41.28	1.00e-56	213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence