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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Mmu-064175
UUCD1 version UUC-MuM-00945
Ensembl Protein ID ENSMUSP00000043834.1
UniProt Accession Q9D994; WDR38_MOUSE
Genbank Protein ID BAB24913.1; BAC36575.1; CAM46061.1; AAI15630.1
Protein Name WD repeat-containing protein 38
Genbank Nucleotide ID AK007246; AK077027; AL844588; BC115629
Gene Name Wdr38
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000035295.10 ENSMUST00000039535.8 ENSMUSP00000043834.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
microRNATRANSFACRepTarRAID2
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.70e-49 164.0 66 104
UBD/Beta-Prp 2.30e-78 264.5 23 185
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gH ++v +++f +d +l++s+s D++i++WD+ + ++l+
   Q: 66 GHRGPVKSCCFsPDgRLIASSSSDHSIRLWDVARSKCLH 104
    8***********999*****************9999986 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
    g+h + ++c +fspd++ l+t+s+dg++ vw +++g ll++l gh ++v++++fspdg +++++s+D+ i++wd+ +kc+h+lkgh++
   Q: 23 GQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQR 111
    678889999******************************************************************************** PP
   S: 96 svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
    sv ++sfsp+++ l+sG++d+ + vw++++g ++ +l gh +++++ ++p+++ l++Gs D+tv +Wdl+ +
   Q: 112 SVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVH-LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
    ***********************************.***********************************8766 PP
   

Organism Mus musculus
Protein Sequence
(Fasta)
MEWAPMNIRA PTRLAVGRVR FYGQHHGEVN CSAFSPDGRT LLTASDDGCV YVWGTKSGRL 60
LWRLAGHRGP VKSCCFSPDG RLIASSSSDH SIRLWDVARS KCLHVLKGHQ RSVETVSFSP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-064175|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGCCCTGCCC AACACCATTG GGTCTCCCAC ATCCATCCCT GCCCACTTTG GTCTGGTTGG 60
GGAGCTGGCA GGCTTGGTTC TGTCATGAAG GAACTAAGTC ACTTACCCAT GCTTCATTCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-064175|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG mmu:76646
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001664 Ailuropoda melanoleuca 76.95 6.00e-131 460.00
IUUC-Aor-010042 Aspergillus oryzae 40.39 1.00e-53 203.00
IUUC-Ame-010858 Astyanax mexicanus 48.47 5.00e-77 281.00
IUUC-Bta-012352 Bos taurus 72.79 6.00e-125 440.00
IUUC-Cja-019585 Callithrix jacchus 74.48 2.00e-128 452.00
IUUC-Cfa-020062 Canis familiaris 71.07 4.00e-110 390.00
IUUC-Csa-023528 Chlorocebus sabaeus 75.93 5.00e-130 456.00
IUUC-Cin-025426 Ciona intestinalis 37.14 6.00e-56 211.00
IUUC-Dre-027740 Danio rerio 50.98 3.00e-50 191.00
IUUC-Dno-030012 Dasypus novemcinctus 61.93 2.00e-112 398.00
IUUC-Dor-030536 Dipodomys ordii 62.80 7.00e-99 353.00
IUUC-Ete-032871 Echinops telfairi 71.86 1.00e-91 328.00
IUUC-Eca-033729 Equus caballus 75.93 8.00e-130 456.00
IUUC-Eeu-034740 Erinaceus europaeus 71.86 7.00e-123 433.00
IUUC-Fca-036514 Felis catus 75.25 2.00e-129 454.00
IUUC-Ggo-044793 Gorilla gorilla 75.25 9.00e-129 452.00
IUUC-Hsa-046414 Homo sapiens 76.35 1.00e-129 456.00
IUUC-Itr-048798 Ictidomys tridecemlineatus 73.31 4.00e-117 414.00
IUUC-Lch-049905 Latimeria chalumnae 49.49 3.00e-83 301.00
IUUC-Loc-052101 Lepisosteus oculatus 51.42 2.00e-80 292.00
IUUC-Laf-053443 Loxodonta africana 71.57 2.00e-123 435.00
IUUC-Mcc-055346 Macaca mulatta 75.59 2.00e-130 458.00
IUUC-Meu-056531 Macropus eugenii 62.07 6.00e-79 286.00
IUUC-Mmr-061721 Microcebus murinus 74.92 3.00e-128 451.00
IUUC-Mdo-062379 Monodelphis domestica 59.60 7.00e-101 360.00
IUUC-Mpu-066361 Mustela putorius furo 75.93 7.00e-130 456.00
IUUC-Mlu-067300 Myotis lucifugus 54.67 1.00e-83 303.00
IUUC-Nle-070150 Nomascus leucogenys 75.00 1.00e-127 449.00
IUUC-Opr-071060 Ochotona princeps 66.44 5.00e-100 357.00
IUUC-Ocu-074101 Oryctolagus cuniculus 76.69 2.00e-130 458.00
IUUC-Oga-088479 Otolemur garnettii 73.90 4.00e-128 450.00
IUUC-Oar-089608 Ovis aries 72.11 1.00e-124 439.00
IUUC-Ptr-091521 Pan troglodytes 76.61 7.00e-131 459.00
IUUC-Pan-092092 Papio anubis 75.93 1.00e-130 459.00
IUUC-Pno-095046 Phaeosphaeria nodorum 33.65 2.00e-28 120.00
IUUC-Pab-098454 Pongo abelii 76.27 8.00e-132 462.00
IUUC-Pca-100981 Procavia capensis 73.90 3.00e-127 447.00
IUUC-Pva-102491 Pteropus vampyrus 75.84 2.00e-130 458.00
IUUC-Rno-105417 Rattus norvegicus 87.77 4.00e-142 497.00
IUUC-Sha-107649 Sarcophilus harrisii 59.53 3.00e-102 364.00
IUUC-Sar-113110 Sorex araneus 61.90 8.00e-80 290.00
IUUC-Ssc-116197 Sus scrofa 73.56 1.00e-125 442.00
IUUC-Tbe-127734 Tupaia belangeri 76.07 2.00e-70 259.00
IUUC-Ttr-128709 Tursiops truncatus 70.85 2.00e-119 422.00
Created Date 25-Jun-2017

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