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Tag Content
UUCD2 ID IUUC-Sbi-114098
UUCD1 version UUC-SoB-01476
Ensembl Protein ID Sb02g023940.1
UniProt Accession C5XC21; C5XC21_SORBI
Genbank Protein ID EER96695.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G192500
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g023940 Sb02g023940.1 Sb02g023940.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 6.20e-09 36.7 140 188
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C+++++e+ ++ ++ ++C++C +
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEQAKKIDH-YMCSDCAK 188
           78.7*****************************888888776.******86 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MAKTKQGKRD VDAYTIKGTN KVVRVGDCVL MRPADTDKPP YVARVERMES DGRGGVRVRV 60
RWYYRPEEAK GGRRPFHGAK ELFLSDHFDT QSAHTIEGKC IVHSFKSYTK LDNVGPEDFY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114098|E3,PHD|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGCCATTC CCCAGCCCAC CTCTTGCTGC ACCCTCGCGC TGCTAGGGTT TGCTCGCAAT 60
CCAGCCGCCT CCGCCATGGC CAAGACGAAG CAAGGGAAGC GGGACGTCGA CGCCTACACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114098|E3,PHD|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF01426--BAH
PF00628--PHD
SMART

SM00439--BAH
SM00249--PHD
Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly
KEGG sbi:SORBI_02g023940
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002427 Ailuropoda melanoleuca 45.45 2.00e-11 63.90
IUUC-Aca-005043 Anolis carolinensis 47.27 2.00e-12 67.40
IUUC-Ani-009326 Aspergillus nidulans 41.82 3.00e-06 46.60
IUUC-Ang-009560 Aspergillus niger 40.74 7.00e-06 45.40
IUUC-Ame-011579 Astyanax mexicanus 48.00 5.00e-11 62.80
IUUC-Bgr-012210 Blumeria graminis 46.30 2.00e-07 49.70
IUUC-Cja-018757 Callithrix jacchus 45.28 2.00e-10 61.20
IUUC-Cfa-021156 Canis familiaris 40.91 2.00e-11 64.30
IUUC-Cpo-022284 Cavia porcellus 45.45 1.00e-11 65.10
IUUC-Csa-023515 Chlorocebus sabaeus 45.45 2.00e-11 64.30
IUUC-Cne-026894 Cryptococcus neoformans 46.43 9.00e-10 57.80
IUUC-Dre-028285 Danio rerio 48.00 2.00e-11 64.30
IUUC-Dno-029446 Dasypus novemcinctus 45.45 1.00e-11 64.30
IUUC-Dse-031262 Dothistroma septosporum 38.00 1.00e-05 44.70
IUUC-Ete-032380 Echinops telfairi 45.45 2.00e-11 64.30
IUUC-Eca-034302 Equus caballus 45.45 2.00e-11 64.30
IUUC-Fca-035578 Felis catus 45.45 2.00e-11 64.30
IUUC-Fal-037017 Ficedula albicollis 49.09 7.00e-13 68.90
IUUC-Gmo-038789 Gadus morhua 43.64 2.00e-11 63.90
IUUC-Gga-040290 Gallus gallus 49.09 7.00e-13 68.90
IUUC-Gac-041666 Gasterosteus aculeatus 41.82 5.00e-11 62.80
IUUC-Ggo-044712 Gorilla gorilla 45.45 2.00e-11 64.30
IUUC-Hsa-046760 Homo sapiens 49.09 7.00e-13 68.90
IUUC-Lch-049793 Latimeria chalumnae 45.45 1.00e-11 64.70
IUUC-Lpe-051400 Leersia perrieri 86.57 3.00e-110 389.00
IUUC-Laf-053656 Loxodonta africana 45.45 2.00e-11 63.90
IUUC-Mcc-055658 Macaca mulatta 45.45 2.00e-11 64.30
IUUC-Meu-056467 Macropus eugenii 37.74 4.00e-04 40.80
IUUC-Mtr-057710 Medicago truncatula 77.31 7.00e-100 355.00
IUUC-Mmr-061132 Microcebus murinus 49.09 8.00e-13 68.90
IUUC-Mdo-062097 Monodelphis domestica 45.28 7.00e-11 62.40
IUUC-Mmu-063458 Mus musculus 49.09 7.00e-13 68.90
IUUC-Mac-065355 Musa acuminata 79.17 1.00e-100 357.00
IUUC-Mpu-066429 Mustela putorius furo 45.45 2.00e-11 64.30
IUUC-Mlu-067746 Myotis lucifugus 45.45 2.00e-11 63.90
IUUC-Nle-070143 Nomascus leucogenys 45.45 2.00e-11 64.30
IUUC-Ont-072257 Oreochromis niloticus 43.64 3.00e-11 63.90
IUUC-Oan-073654 Ornithorhynchus anatinus 45.45 3.00e-11 63.90
IUUC-Ocu-074417 Oryctolagus cuniculus 45.45 2.00e-11 64.30
IUUC-Ola-087236 Oryzias latipes 48.00 3.00e-11 63.50
IUUC-Oga-088662 Otolemur garnettii 45.45 2.00e-11 63.90
IUUC-Oar-090332 Ovis aries 45.45 2.00e-11 64.30
IUUC-Ptr-091328 Pan troglodytes 49.09 8.00e-13 68.60
IUUC-Pan-092122 Papio anubis 45.45 2.00e-11 64.30
IUUC-Pfo-096227 Poecilia formosa 48.00 4.00e-11 63.20
IUUC-Pab-097635 Pongo abelii 45.45 2.00e-11 64.30
IUUC-Pva-102839 Pteropus vampyrus 45.45 2.00e-11 64.30
IUUC-Rno-105402 Rattus norvegicus 52.00 2.00e-12 67.40
IUUC-Sja-107734 Schizosaccharomyces japonicus 36.92 6.00e-09 56.60
IUUC-Spo-108246 Schizosaccharomyces pombe 29.29 5.00e-10 60.50
IUUC-Sit-110474 Setaria italica 97.22 6.00e-120 422.00
IUUC-Ssc-115645 Sus scrofa 45.45 2.00e-11 64.30
IUUC-Tgu-117091 Taeniopygia guttata 49.09 7.00e-13 68.90
IUUC-Tru-118118 Takifugu rubripes 47.27 3.00e-12 66.60
IUUC-Tsy-119214 Tarsius syrichta 45.45 2.00e-11 64.30
IUUC-Tni-120632 Tetraodon nigroviridis 47.27 4.00e-12 66.60
IUUC-Tbe-127627 Tupaia belangeri 44.00 2.00e-05 45.10
IUUC-Ttr-128194 Tursiops truncatus 49.09 7.00e-13 68.90
IUUC-Vpa-130595 Vicugna pacos 45.45 2.00e-11 64.30
IUUC-Xtr-132307 Xenopus tropicalis 45.45 8.00e-12 65.50
IUUC-Xma-134037 Xiphophorus maculatus 48.00 4.00e-11 63.20
Created Date 25-Jun-2017

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