iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027110

Ensembl Protein ID

CMR259CT

UniProt Accession

M1UWC0; M1UWC0_CYAM1

Genbank Protein ID

BAM82481.1

Protein Name

Probable DNA repair protein RAD5

Genbank Nucleotide ID

AP006500

Gene Name

CYME_CMR259C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMR259C	CMR259CT	CMR259CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-10	37.7	848	891

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+++d + + +C Hvf++dC+  +  l ++  ++++CP+Cr
   Q: 848  CPICLESIDDAVALRNCAHVFCRDCILTL--LLSNRHGNAQCPVCR 891
           **********888788**********777..556699********8 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MDRMQTQIGN RHASTPFQSQ VGAASSARKR YRGGEAQRRP NSQASHETGA KSRQQHAAER 60
AYSPSATSWE AKTGRLSDGV GSSRRTPAVG REVFDSPTPE SEPASSCASP QDPVEDMDSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCGCA TGCAAACACA AATAGGGAAC AGGCATGCTT CCACTCCGTT TCAGAGCCAA 60
GTAGGTGCAG CGAGCAGTGC CAGGAAACGG TACAGAGGCG GCGAAGCGCA GCGTCGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR004181--Znf_MIZ
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS51044--ZF_SP_RING

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

cme:CYME_CMR259C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	34.37	4.00e-128	450.00
IUUC-Aml-001237	Ailuropoda melanoleuca	33.98	2.00e-85	308.00
IUUC-Atr-003139	Amborella trichopoda	38.91	5.00e-134	469.00
IUUC-Aca-004994	Anolis carolinensis	34.36	3.00e-91	327.00
IUUC-Aly-006331	Arabidopsis lyrata	38.83	3.00e-134	470.00
IUUC-Ath-007517	Arabidopsis thaliana	38.60	1.00e-133	468.00
IUUC-Ago-007997	Ashbya gossypii	28.00	6.00e-92	330.00
IUUC-Acl-008022	Aspergillus clavatus	32.00	5.00e-92	330.00
IUUC-Afl-008514	Aspergillus flavus	31.57	1.00e-96	346.00
IUUC-Afu-009055	Aspergillus fumigatus	32.49	8.00e-96	343.00
IUUC-Ani-009340	Aspergillus nidulans	29.43	1.00e-60	226.00
IUUC-Ang-009785	Aspergillus niger	32.21	1.00e-95	342.00
IUUC-Aor-010158	Aspergillus oryzae	31.57	1.00e-96	346.00
IUUC-Ate-010536	Aspergillus terreus	30.30	1.00e-84	305.00
IUUC-Ame-011743	Astyanax mexicanus	33.91	2.00e-78	285.00
IUUC-Bgr-012147	Blumeria graminis	30.47	1.00e-102	365.00
IUUC-Bta-013391	Bos taurus	33.80	1.00e-92	332.00
IUUC-Bci-013741	Botrytis cinerea	32.55	6.00e-100	356.00
IUUC-Bdi-014646	Brachypodium distachyon	37.29	5.00e-133	466.00
IUUC-Bol-015484	Brassica oleracea	38.52	5.00e-133	466.00
IUUC-Bra-016925	Brassica rapa	38.58	5.00e-135	473.00
IUUC-Cja-019685	Callithrix jacchus	34.16	5.00e-93	333.00
IUUC-Cfa-020485	Canis familiaris	34.33	2.00e-85	308.00
IUUC-Cpo-021361	Cavia porcellus	34.33	9.00e-87	311.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	28.16	5.00e-54	204.00
IUUC-Csa-023894	Chlorocebus sabaeus	34.16	2.00e-93	334.00
IUUC-Cho-024891	Choloepus hoffmanni	32.75	5.00e-56	210.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	31.82	2.00e-100	358.00
IUUC-Cne-026886	Cryptococcus neoformans	29.38	4.00e-100	357.00
IUUC-Dre-027867	Danio rerio	33.91	2.00e-91	328.00
IUUC-Dno-029517	Dasypus novemcinctus	34.33	1.00e-86	312.00
IUUC-Dor-030590	Dipodomys ordii	35.52	5.00e-43	167.00
IUUC-Dse-031471	Dothistroma septosporum	30.87	6.00e-100	356.00
IUUC-Ete-032421	Echinops telfairi	29.64	5.00e-62	230.00
IUUC-Eca-034058	Equus caballus	34.33	6.00e-83	300.00
IUUC-Eeu-034597	Erinaceus europaeus	27.81	1.00e-30	126.00
IUUC-Fca-035390	Felis catus	33.80	1.00e-84	305.00
IUUC-Fox-038039	Fusarium oxysporum	32.51	5.00e-103	367.00
IUUC-Fso-038179	Fusarium solani	33.11	6.00e-106	376.00
IUUC-Gmo-038544	Gadus morhua	36.82	3.00e-92	330.00
IUUC-Ggr-039735	Gaeumannomyces graminis	31.38	4.00e-90	323.00
IUUC-Gac-042401	Gasterosteus aculeatus	33.10	1.00e-89	322.00
IUUC-Gma-044315	Glycine max	38.73	2.00e-130	457.00
IUUC-Ggo-045628	Gorilla gorilla	34.45	1.00e-93	335.00
IUUC-Hsa-045930	Homo sapiens	34.45	1.00e-93	335.00
IUUC-Hvu-047747	Hordeum vulgare	34.67	1.00e-130	457.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	33.57	7.00e-91	326.00
IUUC-Kpa-049087	Komagataella pastoris	33.17	9.00e-84	303.00
IUUC-Lch-050617	Latimeria chalumnae	34.59	1.00e-92	332.00
IUUC-Lpe-051123	Leersia perrieri	38.48	9.00e-131	459.00
IUUC-Loc-052785	Lepisosteus oculatus	35.68	5.00e-98	350.00
IUUC-Lma-052956	Leptosphaeria maculans	32.47	2.00e-101	361.00
IUUC-Laf-054309	Loxodonta africana	33.86	2.00e-85	308.00
IUUC-Mcc-055493	Macaca mulatta	33.98	2.00e-93	334.00
IUUC-Meu-056270	Macropus eugenii	38.49	5.00e-43	167.00
IUUC-Mor-057210	Magnaporthe oryzae	31.50	4.00e-101	360.00
IUUC-Mpo-057407	Magnaporthe poae	31.84	6.00e-96	343.00
IUUC-Mtr-058565	Medicago truncatula	36.83	1.00e-131	461.00
IUUC-Mla-059170	Melampsora laricipopulina	27.27	1.00e-72	265.00
IUUC-Mvi-060409	Microbotryum violaceum	29.02	1.00e-66	245.00
IUUC-Mmr-061043	Microcebus murinus	33.57	1.00e-83	301.00
IUUC-Mdo-062919	Monodelphis domestica	35.68	2.00e-46	178.00
IUUC-Mmu-064338	Mus musculus	33.86	6.00e-91	326.00
IUUC-Mpu-066781	Mustela putorius furo	33.98	4.00e-85	307.00
IUUC-Mlu-068076	Myotis lucifugus	33.45	2.00e-85	308.00
IUUC-Nfi-068354	Neosartorya fischeri	32.37	9.00e-96	343.00
IUUC-Ncr-068844	Neurospora crassa	32.35	3.00e-99	354.00
IUUC-Nle-069947	Nomascus leucogenys	34.16	6.00e-93	333.00
IUUC-Opr-070388	Ochotona princeps	35.71	3.00e-41	161.00
IUUC-Ont-071782	Oreochromis niloticus	34.43	1.00e-91	328.00
IUUC-Oan-073331	Ornithorhynchus anatinus	34.49	2.00e-89	321.00
IUUC-Ocu-074705	Oryctolagus cuniculus	33.63	3.00e-92	331.00
IUUC-Oba-075316	Oryza barthii	37.71	3.00e-126	444.00
IUUC-Obr-076403	Oryza brachyantha	37.21	1.00e-133	468.00
IUUC-Ogl-077573	Oryza glaberrima	34.17	5.00e-133	466.00
IUUC-Ogu-078083	Oryza glumaepatula	37.71	9.00e-129	452.00
IUUC-Oin-079146	Oryza indica	37.62	9.00e-133	465.00
IUUC-Olo-080615	Oryza longistaminata	38.62	2.00e-133	468.00
IUUC-Ome-081448	Oryza meridionalis	35.82	2.00e-120	424.00
IUUC-Oni-082773	Oryza nivara	37.71	2.00e-128	451.00
IUUC-Opu-083675	Oryza punctata	38.59	4.00e-131	460.00
IUUC-Oru-084543	Oryza rufipogon	37.97	5.00e-130	456.00
IUUC-Osa-085686	Oryza sativa	37.48	2.00e-132	463.00
IUUC-Ola-086830	Oryzias latipes	33.33	8.00e-83	299.00
IUUC-Olu-087669	Ostreococcus lucimarinus	29.40	7.00e-62	229.00
IUUC-Oga-088120	Otolemur garnettii	33.63	3.00e-77	281.00
IUUC-Oar-089293	Ovis aries	33.80	1.00e-92	332.00
IUUC-Ptr-091418	Pan troglodytes	34.27	1.00e-93	335.00
IUUC-Pan-092579	Papio anubis	36.19	5.00e-51	193.00
IUUC-Psi-093626	Pelodiscus sinensis	34.59	2.00e-95	341.00
IUUC-Pno-094916	Phaeosphaeria nodorum	34.50	1.00e-105	375.00
IUUC-Ppa-095877	Physcomitrella patens	39.16	4.00e-139	486.00
IUUC-Pfo-096540	Poecilia formosa	35.85	7.00e-92	329.00
IUUC-Pab-098010	Pongo abelii	34.45	9.00e-94	335.00
IUUC-Pop-099320	Populus trichocarpa	38.25	8.00e-134	469.00
IUUC-Pca-100648	Procavia capensis	34.33	3.00e-93	334.00
IUUC-Ppe-101820	Prunus persica	37.64	6.00e-129	452.00
IUUC-Pva-102896	Pteropus vampyrus	32.67	4.00e-73	267.00
IUUC-Pgr-103454	Puccinia graminis	29.30	1.00e-64	239.00
IUUC-Ptt-103966	Puccinia triticina	27.79	7.00e-71	259.00
IUUC-Pte-104242	Pyrenophora teres	32.35	2.00e-99	355.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	32.10	2.00e-100	358.00
IUUC-Rno-106130	Rattus norvegicus	33.51	2.00e-93	335.00
IUUC-Sce-106396	Saccharomyces cerevisiae	29.83	3.00e-96	344.00
IUUC-Sha-107221	Sarcophilus harrisii	35.68	3.00e-46	178.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	33.73	9.00e-104	369.00
IUUC-Spo-108026	Schizosaccharomyces pombe	29.31	7.00e-95	339.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	31.13	5.00e-101	360.00
IUUC-Smo-109311	Selaginella moellendorffii	34.22	2.00e-101	361.00
IUUC-Sit-110076	Setaria italica	37.76	3.00e-132	464.00
IUUC-Sly-111031	Solanum lycopersicum	36.26	4.00e-138	483.00
IUUC-Stu-112600	Solanum tuberosum	36.11	5.00e-139	486.00
IUUC-Sar-113719	Sorex araneus	35.56	9.00e-97	345.00
IUUC-Sbi-113927	Sorghum bicolor	36.83	4.00e-129	453.00
IUUC-Sre-115131	Sporisorium reilianum	32.33	5.00e-96	343.00
IUUC-Ssc-116186	Sus scrofa	33.98	3.00e-93	334.00
IUUC-Tru-117768	Takifugu rubripes	35.23	3.00e-84	303.00
IUUC-Tsy-118957	Tarsius syrichta	33.27	3.00e-85	307.00
IUUC-Tni-120618	Tetraodon nigroviridis	35.18	4.00e-92	330.00
IUUC-Tca-121137	Theobroma cacao	37.74	8.00e-132	462.00
IUUC-Tre-121896	Trichoderma reesei	32.35	9.00e-102	362.00
IUUC-Tvi-122597	Trichoderma virens	32.68	2.00e-104	371.00
IUUC-Tae-125934	Triticum aestivum	37.15	9.00e-136	475.00
IUUC-Tur-125999	Triticum urartu	37.67	5.00e-128	449.00
IUUC-Tme-126953	Tuber melanosporum	30.68	7.00e-94	336.00
IUUC-Tbe-127642	Tupaia belangeri	36.33	3.00e-37	148.00
IUUC-Ttr-128243	Tursiops truncatus	32.28	1.00e-46	179.00
IUUC-Uma-129629	Ustilago maydis	31.33	1.00e-95	342.00
IUUC-Vda-129849	Verticillium dahliae	30.67	6.00e-92	330.00
IUUC-Vpa-130672	Vicugna pacos	34.15	3.00e-87	314.00
IUUC-Vvi-131508	Vitis vinifera	34.50	2.00e-132	464.00
IUUC-Xtr-132730	Xenopus tropicalis	35.16	3.00e-100	357.00
IUUC-Xma-133384	Xiphophorus maculatus	35.16	1.00e-93	335.00
IUUC-Yli-134588	Yarrowia lipolytica	31.85	3.00e-81	294.00
IUUC-Zma-135801	Zea mays	36.05	4.00e-119	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence