iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010667.2	ENSLACT00000012207.2	ENSLACP00000012115.2
ENSLACG00000010667.2	ENSLACT00000012208.1	ENSLACP00000012116.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-15	57.3	184	213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H++ +  +++   ++l++sG+ D++ kvWD
   Q: 184  HEGVILKVDWnsVNDLILSGGEDCKYKVWD 213
           999*******85339*************** PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

HLVFHNFTAH KELVSCVGWT TADELYSCSD DHQILKWNLL TSETAQVVKL SDEIHPIDLH 60
WFPKTIGGKK QTQTEIFVLT SSDGKFHLVS RTGRVEKSVD AHRGAVLAGR WNCEGTALVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAAAAAAA AAAAAAAATA TATATATATA TATATATATA CATAAACACA TATTCCATTA 60
GCTGTTACCT TAACATCCAG TAATTCCTCA CCACGGTTTA AAAAAAAAAT CACCTTGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0060271--P:cilium assembly
GO:0060026--P:convergent extension
GO:0008104--P:protein localization
GO:0060042--P:retina morphogenesis in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001564	Ailuropoda melanoleuca	85.48	0.00e+00	788.00
IUUC-Apl-003721	Anas platyrhynchos	82.19	0.00e+00	1313.00
IUUC-Aca-004488	Anolis carolinensis	83.47	0.00e+00	1319.00
IUUC-Ame-011402	Astyanax mexicanus	83.74	0.00e+00	820.00
IUUC-Bta-013037	Bos taurus	74.05	0.00e+00	1167.00
IUUC-Cel-018360	Caenorhabditis elegans	41.30	0.00e+00	664.00
IUUC-Cja-019076	Callithrix jacchus	80.32	0.00e+00	1073.00
IUUC-Cfa-020999	Canis familiaris	81.66	0.00e+00	1305.00
IUUC-Cpo-021333	Cavia porcellus	74.51	0.00e+00	1138.00
IUUC-Cre-022899	Chlamydomonas reinhardtii	47.90	0.00e+00	688.00
IUUC-Csa-023699	Chlorocebus sabaeus	81.22	0.00e+00	1316.00
IUUC-Cho-024904	Choloepus hoffmanni	77.38	0.00e+00	728.00
IUUC-Cin-025399	Ciona intestinalis	57.98	0.00e+00	963.00
IUUC-Csv-026186	Ciona savignyi	55.98	0.00e+00	932.00
IUUC-Dre-028276	Danio rerio	75.89	0.00e+00	1262.00
IUUC-Dno-029824	Dasypus novemcinctus	81.60	0.00e+00	1329.00
IUUC-Dor-031141	Dipodomys ordii	77.62	0.00e+00	1221.00
IUUC-Dme-031620	Drosophila melanogaster	36.64	6.00e-145	508.00
IUUC-Ete-033028	Echinops telfairi	57.11	3.00e-123	436.00
IUUC-Eca-033339	Equus caballus	82.27	0.00e+00	1298.00
IUUC-Eeu-034909	Erinaceus europaeus	77.99	0.00e+00	855.00
IUUC-Fca-035780	Felis catus	81.81	0.00e+00	1295.00
IUUC-Fal-037447	Ficedula albicollis	76.07	0.00e+00	1190.00
IUUC-Gmo-038657	Gadus morhua	63.22	0.00e+00	849.00
IUUC-Gga-040689	Gallus gallus	82.63	0.00e+00	1311.00
IUUC-Gac-041586	Gasterosteus aculeatus	73.22	0.00e+00	1024.00
IUUC-Hsa-047005	Homo sapiens	81.67	0.00e+00	1318.00
IUUC-Itr-048757	Ictidomys tridecemlineatus	83.19	0.00e+00	984.00
IUUC-Loc-052774	Lepisosteus oculatus	80.23	0.00e+00	1073.00
IUUC-Laf-053765	Loxodonta africana	81.48	0.00e+00	1289.00
IUUC-Mcc-055052	Macaca mulatta	81.22	0.00e+00	1316.00
IUUC-Meu-056368	Macropus eugenii	69.08	0.00e+00	1090.00
IUUC-Mga-059488	Meleagris gallopavo	82.63	0.00e+00	1314.00
IUUC-Mmr-061527	Microcebus murinus	81.52	0.00e+00	1316.00
IUUC-Mdo-062850	Monodelphis domestica	80.70	0.00e+00	1078.00
IUUC-Mmu-063117	Mus musculus	80.50	0.00e+00	1288.00
IUUC-Mpu-066550	Mustela putorius furo	80.58	0.00e+00	1197.00
IUUC-Mlu-067772	Myotis lucifugus	78.76	0.00e+00	1220.00
IUUC-Nle-069215	Nomascus leucogenys	80.88	0.00e+00	1305.00
IUUC-Opr-070725	Ochotona princeps	63.66	0.00e+00	974.00
IUUC-Ont-072147	Oreochromis niloticus	73.84	0.00e+00	1249.00
IUUC-Oan-073176	Ornithorhynchus anatinus	84.96	5.00e-58	215.00
IUUC-Ocu-073896	Oryctolagus cuniculus	81.00	0.00e+00	1066.00
IUUC-Ola-086767	Oryzias latipes	69.38	0.00e+00	974.00
IUUC-Oga-088113	Otolemur garnettii	80.29	0.00e+00	1332.00
IUUC-Oar-089683	Ovis aries	78.53	0.00e+00	1258.00
IUUC-Ptr-091563	Pan troglodytes	81.81	0.00e+00	1319.00
IUUC-Pan-092042	Papio anubis	81.08	0.00e+00	1315.00
IUUC-Psi-093306	Pelodiscus sinensis	82.68	0.00e+00	1363.00
IUUC-Ppa-095694	Physcomitrella patens	46.35	0.00e+00	730.00
IUUC-Pfo-096800	Poecilia formosa	73.43	0.00e+00	1221.00
IUUC-Pab-098356	Pongo abelii	81.54	0.00e+00	1315.00
IUUC-Pva-102246	Pteropus vampyrus	76.67	0.00e+00	1219.00
IUUC-Rno-105195	Rattus norvegicus	79.90	0.00e+00	1294.00
IUUC-Sha-107056	Sarcophilus harrisii	80.95	0.00e+00	1304.00
IUUC-Smo-109240	Selaginella moellendorffii	44.11	1.00e-176	613.00
IUUC-Sar-113301	Sorex araneus	73.13	1.00e-127	450.00
IUUC-Ssc-116040	Sus scrofa	85.04	1.00e-131	462.00
IUUC-Tgu-117127	Taeniopygia guttata	78.23	0.00e+00	1247.00
IUUC-Tru-118663	Takifugu rubripes	71.39	0.00e+00	1188.00
IUUC-Tsy-119207	Tarsius syrichta	71.49	0.00e+00	1114.00
IUUC-Tni-120705	Tetraodon nigroviridis	69.75	0.00e+00	1182.00
IUUC-Tbe-127434	Tupaia belangeri	73.27	0.00e+00	826.00
IUUC-Ttr-128937	Tursiops truncatus	80.92	0.00e+00	1302.00
IUUC-Vpa-130518	Vicugna pacos	76.60	0.00e+00	1193.00
IUUC-Xtr-131879	Xenopus tropicalis	75.84	0.00e+00	1253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence