iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116040

Ensembl Protein ID

ENSSSCP00000020004.1

UniProt Accession

I3L7J8; I3L7J8_PIG

Genbank Protein ID

ENSSSCP00000020004

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU466375

Gene Name

IFT80

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000030666.1	ENSSSCT00000024496.1	ENSSSCP00000020004.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-17	62.2	218	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ ++t++a+ +d  l+++Gs  +t++++D
   Q: 218  HEHPITSVAWaPDgELFAVGS-FHTLRLCD 246
           99*********9978888887.689**999 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MTHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETSQI VKLPDDIYPI DLHWFPKSLG 60
TKKQTQAESF VLTSSDGKFH LISKLGRVEK SVEAHCGAVL AGRWNYEGTA LVTVGEDGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACATCTGA CTATTTTTTT ACTCTTCTTA TAATCTGCAT ATACAGAATA CTGTATTAAG 60
ATTTAAGACT TTTGTGTATT TTATGTCTCT TTAACATAAT GACACATCAA GAATTAGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0005929--C:cilium
GO:0030992--C:intraciliary transport particle B
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001564	Ailuropoda melanoleuca	97.24	2.00e-146	511.00
IUUC-Apl-003721	Anas platyrhynchos	86.33	9.00e-134	470.00
IUUC-Aca-004488	Anolis carolinensis	88.98	2.00e-137	483.00
IUUC-Ame-011402	Astyanax mexicanus	82.28	2.00e-127	448.00
IUUC-Bta-013037	Bos taurus	66.93	2.00e-92	333.00
IUUC-Cel-018360	Caenorhabditis elegans	48.82	1.00e-70	261.00
IUUC-Cfa-020999	Canis familiaris	96.48	1.00e-147	516.00
IUUC-Cpo-021333	Cavia porcellus	98.80	6.00e-146	511.00
IUUC-Cre-022899	Chlamydomonas reinhardtii	51.41	9.00e-72	264.00
IUUC-Csa-023699	Chlorocebus sabaeus	96.09	4.00e-148	518.00
IUUC-Cho-024904	Choloepus hoffmanni	95.28	2.00e-142	499.00
IUUC-Cin-025399	Ciona intestinalis	63.39	4.00e-97	348.00
IUUC-Csv-026186	Ciona savignyi	60.24	2.00e-92	333.00
IUUC-Dre-028276	Danio rerio	79.92	9.00e-126	444.00
IUUC-Dno-029824	Dasypus novemcinctus	97.27	5.00e-149	521.00
IUUC-Dor-031141	Dipodomys ordii	93.31	9.00e-139	487.00
IUUC-Dme-031620	Drosophila melanogaster	41.13	6.00e-60	225.00
IUUC-Eca-033339	Equus caballus	95.67	2.00e-145	509.00
IUUC-Fca-035780	Felis catus	96.85	5.00e-147	514.00
IUUC-Fal-037447	Ficedula albicollis	75.59	1.00e-111	397.00
IUUC-Gga-040689	Gallus gallus	87.40	9.00e-134	470.00
IUUC-Hsa-047005	Homo sapiens	96.85	9.00e-148	517.00
IUUC-Itr-048757	Ictidomys tridecemlineatus	95.35	9.00e-71	261.00
IUUC-Lch-050459	Latimeria chalumnae	85.04	3.00e-131	462.00
IUUC-Laf-053765	Loxodonta africana	94.94	7.00e-144	504.00
IUUC-Mcc-055052	Macaca mulatta	96.09	4.00e-148	518.00
IUUC-Meu-056368	Macropus eugenii	87.85	4.00e-129	455.00
IUUC-Mga-059488	Meleagris gallopavo	87.40	3.00e-134	472.00
IUUC-Mmr-061527	Microcebus murinus	96.43	7.00e-145	507.00
IUUC-Mmu-063117	Mus musculus	96.46	6.00e-146	511.00
IUUC-Mpu-066550	Mustela putorius furo	97.22	4.00e-103	368.00
IUUC-Mlu-067772	Myotis lucifugus	95.31	5.00e-146	511.00
IUUC-Nle-069215	Nomascus leucogenys	96.46	5.00e-147	514.00
IUUC-Opr-070725	Ochotona princeps	86.96	9.00e-128	450.00
IUUC-Ont-072147	Oreochromis niloticus	79.05	8.00e-125	441.00
IUUC-Oan-073176	Ornithorhynchus anatinus	88.00	1.00e-62	231.00
IUUC-Oga-088113	Otolemur garnettii	97.66	7.00e-150	524.00
IUUC-Oar-089683	Ovis aries	84.77	2.00e-128	452.00
IUUC-Ptr-091563	Pan troglodytes	96.85	9.00e-148	517.00
IUUC-Pan-092042	Papio anubis	95.70	1.00e-147	516.00
IUUC-Psi-093306	Pelodiscus sinensis	90.55	7.00e-141	494.00
IUUC-Ppa-095694	Physcomitrella patens	44.98	8.00e-70	258.00
IUUC-Pfo-096800	Poecilia formosa	78.57	3.00e-123	435.00
IUUC-Pab-098356	Pongo abelii	96.06	2.00e-146	513.00
IUUC-Pva-102246	Pteropus vampyrus	97.24	2.00e-147	516.00
IUUC-Rno-105195	Rattus norvegicus	96.06	3.00e-145	508.00
IUUC-Sha-107056	Sarcophilus harrisii	94.90	8.00e-145	507.00
IUUC-Smo-109451	Selaginella moellendorffii	47.04	1.00e-63	237.00
IUUC-Tgu-117127	Taeniopygia guttata	84.13	3.00e-131	462.00
IUUC-Tru-118663	Takifugu rubripes	76.26	4.00e-124	438.00
IUUC-Tsy-119207	Tarsius syrichta	85.83	3.00e-125	442.00
IUUC-Tni-120705	Tetraodon nigroviridis	75.49	3.00e-123	435.00
IUUC-Ttr-128937	Tursiops truncatus	97.64	3.00e-148	518.00
IUUC-Vpa-130518	Vicugna pacos	97.64	3.00e-148	518.00
IUUC-Xtr-131879	Xenopus tropicalis	82.68	1.00e-127	450.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence