iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-047875

Ensembl Protein ID

ENSSTOP00000020408.1

UniProt Accession

I3N7R2; I3N7R2_ICTTR

Genbank Protein ID

ENSSTOP00000020408

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01088442

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000024117.1	ENSSTOT00000021910.1	ENSSTOP00000020408.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.30e-21	73.6	179	218
ULD/UDP/UBQ/UBQ_PIM	2.80e-26	91.3	20	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 179  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 218
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 20   VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKAK 97
           68*************************************************************************987 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

VACCVRIPGP PRLSGPAMAV TITLKTLQQQ TFKIRMEPDE TVKVLKEKIE AEKGRDAFPV 60
AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV VMVTKAKAGQ GTSAPPEVSP TAVPESSIPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCAGTAAG ATGGCGGCGG CGTGAGTTGC ATGTTGTGTG AGGATTCCGG GGCCGCCGCG 60
TCTCTCGGGC CCCGCCATGG CCGTCACCAT CACTCTTAAA ACGCTGCAGC AGCAGACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.11	2.00e-32	133.00
IUUC-Aml-001515	Ailuropoda melanoleuca	90.79	4.00e-153	533.00
IUUC-Aca-004704	Anolis carolinensis	78.55	1.00e-111	396.00
IUUC-Aly-006159	Arabidopsis lyrata	34.16	3.00e-50	192.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	4.00e-29	121.00
IUUC-Bgr-012056	Blumeria graminis	34.60	3.00e-21	95.90
IUUC-Bta-012377	Bos taurus	95.59	3.00e-148	517.00
IUUC-Bci-013933	Botrytis cinerea	32.27	4.00e-21	95.50
IUUC-Bdi-014253	Brachypodium distachyon	38.93	4.00e-32	132.00
IUUC-Bra-016970	Brassica rapa	34.77	9.00e-50	190.00
IUUC-Cel-018364	Caenorhabditis elegans	30.89	4.00e-26	111.00
IUUC-Cja-018946	Callithrix jacchus	96.05	5.00e-156	543.00
IUUC-Cfa-020577	Canis familiaris	96.42	1.00e-154	538.00
IUUC-Cpo-021850	Cavia porcellus	92.37	1.00e-176	612.00
IUUC-Csa-023183	Chlorocebus sabaeus	97.25	2.00e-154	538.00
IUUC-Dre-028209	Danio rerio	69.04	5.00e-62	231.00
IUUC-Dno-030017	Dasypus novemcinctus	92.66	7.00e-130	456.00
IUUC-Dor-030358	Dipodomys ordii	85.16	4.00e-127	447.00
IUUC-Dme-032027	Drosophila melanogaster	39.34	3.00e-63	235.00
IUUC-Eca-033599	Equus caballus	93.22	3.00e-137	480.00
IUUC-Fca-036051	Felis catus	95.59	9.00e-153	532.00
IUUC-Gmo-038528	Gadus morhua	58.56	4.00e-90	324.00
IUUC-Gga-040133	Gallus gallus	86.98	1.00e-74	272.00
IUUC-Gac-042298	Gasterosteus aculeatus	61.19	3.00e-84	304.00
IUUC-Ggo-045084	Gorilla gorilla	97.37	3.00e-165	573.00
IUUC-Hsa-046614	Homo sapiens	97.52	5.00e-155	540.00
IUUC-Hvu-047832	Hordeum vulgare	39.34	2.00e-32	132.00
IUUC-Lch-050563	Latimeria chalumnae	62.16	5.00e-104	370.00
IUUC-Lpe-051087	Leersia perrieri	39.11	4.00e-34	138.00
IUUC-Laf-054589	Loxodonta africana	96.42	4.00e-146	510.00
IUUC-Mcc-055860	Macaca mulatta	97.25	2.00e-154	538.00
IUUC-Meu-056459	Macropus eugenii	93.95	1.00e-104	372.00
IUUC-Mmr-060819	Microcebus murinus	96.69	2.00e-166	578.00
IUUC-Mdo-062742	Monodelphis domestica	85.68	2.00e-145	508.00
IUUC-Mmu-063929	Mus musculus	95.32	3.00e-165	574.00
IUUC-Mac-065180	Musa acuminata	34.01	3.00e-42	165.00
IUUC-Mpu-066684	Mustela putorius furo	96.42	2.00e-157	548.00
IUUC-Mlu-067787	Myotis lucifugus	94.49	4.00e-152	530.00
IUUC-Nle-069846	Nomascus leucogenys	85.83	2.00e-133	468.00
IUUC-Ont-072271	Oreochromis niloticus	69.20	2.00e-66	245.00
IUUC-Oan-073572	Ornithorhynchus anatinus	80.17	6.00e-131	460.00
IUUC-Ocu-074968	Oryctolagus cuniculus	95.62	9.00e-106	377.00
IUUC-Oba-075392	Oryza barthii	38.71	5.00e-32	131.00
IUUC-Ogu-078883	Oryza glumaepatula	38.71	4.00e-32	132.00
IUUC-Olo-080929	Oryza longistaminata	38.71	3.00e-32	132.00
IUUC-Ome-081866	Oryza meridionalis	38.71	4.00e-32	132.00
IUUC-Oni-083092	Oryza nivara	38.71	5.00e-32	131.00
IUUC-Oru-084816	Oryza rufipogon	38.71	5.00e-32	131.00
IUUC-Ola-086474	Oryzias latipes	59.69	2.00e-61	228.00
IUUC-Oga-089075	Otolemur garnettii	95.00	2.00e-157	548.00
IUUC-Oar-090387	Ovis aries	94.47	4.00e-153	533.00
IUUC-Ptr-090912	Pan troglodytes	93.94	3.00e-144	504.00
IUUC-Pan-092140	Papio anubis	96.84	9.00e-164	569.00
IUUC-Psi-093347	Pelodiscus sinensis	86.46	1.00e-60	226.00
IUUC-Pfo-096607	Poecilia formosa	64.29	5.00e-95	340.00
IUUC-Pab-097738	Pongo abelii	93.66	6.00e-148	516.00
IUUC-Pca-100348	Procavia capensis	93.41	3.00e-144	504.00
IUUC-Pva-102412	Pteropus vampyrus	96.14	5.00e-156	543.00
IUUC-Pgr-103618	Puccinia graminis	37.31	8.00e-25	107.00
IUUC-Rno-105569	Rattus norvegicus	94.77	2.00e-150	525.00
IUUC-Sha-106918	Sarcophilus harrisii	84.84	6.00e-131	460.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.42	5.00e-33	134.00
IUUC-Smo-109518	Selaginella moellendorffii	38.25	9.00e-32	130.00
IUUC-Sit-109813	Setaria italica	35.16	2.00e-46	179.00
IUUC-Sbi-114459	Sorghum bicolor	32.29	2.00e-44	172.00
IUUC-Ssc-115460	Sus scrofa	95.26	1.00e-164	572.00
IUUC-Tgu-116508	Taeniopygia guttata	90.62	8.00e-30	120.00
IUUC-Tsy-119385	Tarsius syrichta	80.15	1.00e-71	262.00
IUUC-Tni-120493	Tetraodon nigroviridis	69.68	1.00e-72	266.00
IUUC-Tca-121594	Theobroma cacao	35.79	4.00e-50	191.00
IUUC-Tre-121911	Trichoderma reesei	42.11	1.00e-25	109.00
IUUC-Tae-125346	Triticum aestivum	33.33	1.00e-42	167.00
IUUC-Tur-126610	Triticum urartu	38.11	7.00e-33	135.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	7.00e-55	207.00
IUUC-Ttr-129232	Tursiops truncatus	86.50	1.00e-144	505.00
IUUC-Vvi-131039	Vitis vinifera	39.42	3.00e-38	152.00
IUUC-Xma-133647	Xiphophorus maculatus	75.81	5.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence