iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116222

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU929026

Gene Name

LNX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000008838.2	ENSSSCT00000009675.2	ENSSSCP00000009426.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	78.29	0.00e+00	1108.00	IUUC-Hsa-046470
E3 activity/RING/RING	78.56	0.00e+00	1102.00	IUUC-Mmu-063364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MNLSDPADEP DLSPAPLCVV CGQAHSPEEN HFYTYPEEVD DDLICHICLQ ALLDPLDTPC 60
GHTYCTVCLT NFLVEKDFCP VDRKPVVLQH CKKSSILVNK LLNKLLVTCP FTEHCEEVLQ 120

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Nucleotide Sequence
(Fasta)

ATGAACCTGT CAGACCCCGC TGATGAACCG GACCTCAGCC CTGCACCCCT ATGTGTGGTG 60
TGTGGCCAAG CCCACTCCCC CGAGGAAAAC CACTTCTACA CTTACCCAGA AGAGGTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001478--PDZ
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	78.09	0.00e+00	1063.00
IUUC-Apl-003561	Anas platyrhynchos	65.94	0.00e+00	897.00
IUUC-Aca-005346	Anolis carolinensis	64.95	0.00e+00	924.00
IUUC-Bta-012970	Bos taurus	80.03	0.00e+00	1105.00
IUUC-Cja-019412	Callithrix jacchus	77.64	0.00e+00	1100.00
IUUC-Cfa-020735	Canis familiaris	78.56	0.00e+00	1112.00
IUUC-Cpo-022198	Cavia porcellus	68.68	0.00e+00	900.00
IUUC-Dno-028889	Dasypus novemcinctus	78.92	0.00e+00	1124.00
IUUC-Dor-030810	Dipodomys ordii	66.88	0.00e+00	751.00
IUUC-Fca-036264	Felis catus	79.53	0.00e+00	1061.00
IUUC-Fal-037198	Ficedula albicollis	67.07	0.00e+00	952.00
IUUC-Gga-040766	Gallus gallus	62.89	0.00e+00	913.00
IUUC-Ggo-045057	Gorilla gorilla	78.02	0.00e+00	1118.00
IUUC-Hsa-046470	Homo sapiens	78.29	0.00e+00	1141.00
IUUC-Itr-048393	Ictidomys tridecemlineatus	80.14	0.00e+00	1148.00
IUUC-Lch-050081	Latimeria chalumnae	59.84	0.00e+00	837.00
IUUC-Loc-052884	Lepisosteus oculatus	56.55	0.00e+00	784.00
IUUC-Laf-054498	Loxodonta africana	77.61	0.00e+00	1088.00
IUUC-Meu-056401	Macropus eugenii	54.89	1.00e-142	499.00
IUUC-Mga-059504	Meleagris gallopavo	65.94	0.00e+00	930.00
IUUC-Mmr-060696	Microcebus murinus	60.28	0.00e+00	726.00
IUUC-Mdo-062731	Monodelphis domestica	71.92	0.00e+00	1018.00
IUUC-Mmu-063364	Mus musculus	78.56	0.00e+00	1133.00
IUUC-Mpu-066626	Mustela putorius furo	78.02	0.00e+00	1097.00
IUUC-Mlu-068207	Myotis lucifugus	78.12	0.00e+00	1090.00
IUUC-Nle-069304	Nomascus leucogenys	78.43	0.00e+00	1144.00
IUUC-Opr-071080	Ochotona princeps	68.42	0.00e+00	961.00
IUUC-Ont-072002	Oreochromis niloticus	53.15	0.00e+00	722.00
IUUC-Ola-086477	Oryzias latipes	53.32	0.00e+00	721.00
IUUC-Oga-089142	Otolemur garnettii	77.10	0.00e+00	1080.00
IUUC-Oar-090359	Ovis aries	79.65	0.00e+00	1109.00
IUUC-Ptr-090797	Pan troglodytes	78.21	0.00e+00	1140.00
IUUC-Pan-091910	Papio anubis	78.02	0.00e+00	1137.00
IUUC-Psi-093386	Pelodiscus sinensis	67.21	0.00e+00	944.00
IUUC-Pfo-096370	Poecilia formosa	53.51	0.00e+00	712.00
IUUC-Pab-097761	Pongo abelii	81.12	0.00e+00	907.00
IUUC-Pva-102443	Pteropus vampyrus	75.00	0.00e+00	800.00
IUUC-Rno-106030	Rattus norvegicus	78.02	0.00e+00	1119.00
IUUC-Sha-107609	Sarcophilus harrisii	70.61	0.00e+00	1006.00
IUUC-Sar-113333	Sorex araneus	75.69	0.00e+00	1080.00
IUUC-Tgu-117019	Taeniopygia guttata	67.13	0.00e+00	929.00
IUUC-Tru-118481	Takifugu rubripes	55.38	0.00e+00	736.00
IUUC-Tni-119796	Tetraodon nigroviridis	57.26	7.00e-147	514.00
IUUC-Tbe-127538	Tupaia belangeri	77.26	0.00e+00	1088.00
IUUC-Ttr-128787	Tursiops truncatus	78.15	0.00e+00	1068.00
IUUC-Xtr-132476	Xenopus tropicalis	56.87	0.00e+00	775.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence