iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097983

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01038358

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000009825.2	ENSPPYT00000011430.2	ENSPPYP00000011001.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-41	136.5	100	137
UBD/Beta-Prp	2.90e-52	177.8	181	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v+ ++f  +dt l+sGs+D+t+k+WD+ +g ++
   Q: 100  GHKHAVSTCHFcvDDTKLLSGSYDCTVKLWDPVDGSVV 137
           8***********777****************9999876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgkcvht 89
           hh+  it+ +f pd++ +a+ s d++ik+wdvt++ +l ++ + h+++++ ++f  +g +l t+s D+++k+w++        g cv  
   Q: 181  HHTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATLLTItKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHtgefrnRGACVTL 269
           99***********************************99999*******************************999888888999**** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
           ++ghe sv s++f +++++l+sG+ drt+ +wd+ +g+     l+gh+++v+ v+++ +++ + s+s+Drt+rlW+++
   Q: 270  MQGHEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKL-SLKGHNDWVMDVAISNNKKWILSASKDRTMRLWNIE 346
           *****************************************.**********************************94 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MASPPRCSPT AQDMECKLPP PSAPASECRP GRLSWGTLAR ALGRFKLTIP RTHLLATVDP 60
LALDREPPPQ LLLEKHQVPE KLIWGDQEPL SKIPFKILSG HKHAVSTCHF CVDDTKLLSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCCC CGCCGCGGTG CTCCCCGACA GCCCAGGACA TGGAATGCAA GTTGCCGCCA 60
CCCTCGGCCC CCGCCAGCGA GTGTCGTCCC GGCAGGCTGT CCTGGGGGAC CCTGGCGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	65.90	3.00e-117	414.00
IUUC-Apl-003571	Anas platyrhynchos	45.45	2.00e-86	312.00
IUUC-Aca-005232	Anolis carolinensis	42.41	5.00e-62	230.00
IUUC-Ame-011833	Astyanax mexicanus	47.94	3.00e-49	187.00
IUUC-Bta-013562	Bos taurus	64.93	2.00e-157	548.00
IUUC-Cja-019202	Callithrix jacchus	79.45	0.00e+00	726.00
IUUC-Cfa-021095	Canis familiaris	54.19	2.00e-129	455.00
IUUC-Cpo-022170	Cavia porcellus	64.86	2.00e-161	561.00
IUUC-Csa-024218	Chlorocebus sabaeus	83.44	0.00e+00	751.00
IUUC-Cho-024561	Choloepus hoffmanni	68.90	2.00e-111	395.00
IUUC-Dno-029722	Dasypus novemcinctus	65.18	9.00e-131	459.00
IUUC-Dor-030464	Dipodomys ordii	60.56	1.00e-111	395.00
IUUC-Ete-032931	Echinops telfairi	56.80	2.00e-93	335.00
IUUC-Eca-034428	Equus caballus	70.79	2.00e-149	521.00
IUUC-Eeu-034568	Erinaceus europaeus	61.44	9.00e-114	403.00
IUUC-Fca-035707	Felis catus	51.72	7.00e-126	444.00
IUUC-Gmo-039646	Gadus morhua	41.16	2.00e-60	225.00
IUUC-Gga-040710	Gallus gallus	50.65	5.00e-85	307.00
IUUC-Ggo-044611	Gorilla gorilla	76.24	3.00e-172	597.00
IUUC-Hsa-046138	Homo sapiens	86.23	0.00e+00	796.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	61.36	4.00e-143	501.00
IUUC-Lch-050329	Latimeria chalumnae	45.58	2.00e-90	325.00
IUUC-Laf-053777	Loxodonta africana	66.37	1.00e-166	578.00
IUUC-Mcc-055771	Macaca mulatta	83.26	0.00e+00	745.00
IUUC-Meu-056584	Macropus eugenii	47.99	4.00e-85	308.00
IUUC-Mga-059818	Meleagris gallopavo	44.70	4.00e-87	314.00
IUUC-Mmr-060639	Microcebus murinus	67.91	2.00e-139	488.00
IUUC-Mdo-062321	Monodelphis domestica	46.58	2.00e-98	352.00
IUUC-Mpu-066849	Mustela putorius furo	58.25	8.00e-127	446.00
IUUC-Mlu-067238	Myotis lucifugus	60.37	6.00e-147	513.00
IUUC-Ont-071230	Oreochromis niloticus	39.46	3.00e-69	255.00
IUUC-Oan-072698	Ornithorhynchus anatinus	54.43	2.00e-120	425.00
IUUC-Ocu-074219	Oryctolagus cuniculus	68.36	1.00e-144	506.00
IUUC-Oga-087913	Otolemur garnettii	65.24	2.00e-159	555.00
IUUC-Oar-089977	Ovis aries	69.53	3.00e-155	541.00
IUUC-Ptr-090876	Pan troglodytes	86.22	0.00e+00	777.00
IUUC-Pan-091936	Papio anubis	95.53	8.00e-136	475.00
IUUC-Psi-093015	Pelodiscus sinensis	44.40	9.00e-56	209.00
IUUC-Pma-094552	Petromyzon marinus	32.35	4.00e-27	114.00
IUUC-Pfo-096240	Poecilia formosa	40.32	3.00e-66	247.00
IUUC-Pca-100752	Procavia capensis	54.36	2.00e-121	429.00
IUUC-Pva-102199	Pteropus vampyrus	60.40	1.00e-148	519.00
IUUC-Rno-106062	Rattus norvegicus	62.74	1.00e-148	519.00
IUUC-Ssc-116089	Sus scrofa	66.10	2.00e-153	535.00
IUUC-Tbe-127860	Tupaia belangeri	61.37	6.00e-153	533.00
IUUC-Ttr-129152	Tursiops truncatus	66.84	4.00e-148	517.00
IUUC-Vpa-130745	Vicugna pacos	51.06	3.00e-121	428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence