iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	98.68	2.00e-129	459.00	IUUC-Hsa-046894

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGGKQSTAAR SRGPFPGVST DDSAVPPPGG APHFGHYRTG GGAMGLRSRS VSSVAGMGMD 60
PSTTGGVPFS LYTPASRGTG DSERAPGGGG STSDSTYAHG NGYQETGGGH HRDGMLYLGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCCTTCTC CTTTTTTCAT TTCTCTCCTC GGGCTCTTTT GTGGCTCCCC CAACCCCCCG 60
CCTTTATGTT CCCCCGGCTC TCCACCCGCT TCTGAGTGGT GGGGGAGGGT CTCGGCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005768--C:endosome
GO:0016020--C:membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070936--P:protein K48-linked ubiquitination

KEGG

rno:690769

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004093	Anas platyrhynchos	95.45	3.00e-60	222.00
IUUC-Bta-012934	Bos taurus	96.04	8.00e-128	449.00
IUUC-Cja-019419	Callithrix jacchus	98.68	8.00e-131	459.00
IUUC-Cfa-020388	Canis familiaris	98.37	1.00e-105	374.00
IUUC-Cpo-021584	Cavia porcellus	97.80	9.00e-130	455.00
IUUC-Dre-027713	Danio rerio	76.21	8.00e-95	339.00
IUUC-Eca-033414	Equus caballus	100.00	9.00e-66	241.00
IUUC-Fca-036570	Felis catus	98.24	3.00e-130	457.00
IUUC-Fal-037096	Ficedula albicollis	96.30	2.00e-76	277.00
IUUC-Fso-038176	Fusarium solani	51.02	1.00e-08	55.10
IUUC-Gga-041242	Gallus gallus	85.96	2.00e-94	338.00
IUUC-Hsa-046894	Homo sapiens	98.68	8.00e-131	459.00
IUUC-Itr-048339	Ictidomys tridecemlineatus	100.00	6.00e-49	184.00
IUUC-Lch-049749	Latimeria chalumnae	69.01	2.00e-39	154.00
IUUC-Loc-052268	Lepisosteus oculatus	79.74	1.00e-95	341.00
IUUC-Laf-054263	Loxodonta africana	97.36	5.00e-129	452.00
IUUC-Mpo-057355	Magnaporthe poae	46.77	7.00e-09	55.80
IUUC-Mla-059140	Melampsora laricipopulina	33.33	6.00e-05	42.00
IUUC-Mga-059226	Meleagris gallopavo	98.82	1.00e-48	183.00
IUUC-Mmu-064275	Mus musculus	99.56	6.00e-132	462.00
IUUC-Mpu-066334	Mustela putorius furo	98.24	3.00e-130	457.00
IUUC-Mlu-067491	Myotis lucifugus	96.49	3.00e-123	433.00
IUUC-Ont-071907	Oreochromis niloticus	70.04	3.00e-81	294.00
IUUC-Oan-072941	Ornithorhynchus anatinus	88.10	5.00e-39	151.00
IUUC-Ocu-074256	Oryctolagus cuniculus	97.80	1.00e-125	442.00
IUUC-Ola-087551	Oryzias latipes	90.80	1.00e-46	176.00
IUUC-Pfo-097234	Poecilia formosa	72.81	2.00e-89	321.00
IUUC-Pab-098719	Pongo abelii	98.68	8.00e-131	459.00
IUUC-Sja-107832	Schizosaccharomyces japonicus	34.26	1.00e-09	57.00
IUUC-Sre-115192	Sporisorium reilianum	38.78	2.00e-15	78.60
IUUC-Tgu-116682	Taeniopygia guttata	86.44	2.00e-81	294.00
IUUC-Tre-122233	Trichoderma reesei	32.32	1.00e-06	48.50
IUUC-Tvi-122664	Trichoderma virens	35.04	5.00e-09	56.20
IUUC-Tme-127002	Tuber melanosporum	56.25	1.00e-10	60.80
IUUC-Uma-129459	Ustilago maydis	37.62	5.00e-15	77.40
IUUC-Vda-129847	Verticillium dahliae	54.00	4.00e-10	59.30
IUUC-Xtr-132972	Xenopus tropicalis	63.00	1.00e-61	228.00
IUUC-Xma-134213	Xiphophorus maculatus	72.69	1.00e-88	318.00
IUUC-Yli-134502	Yarrowia lipolytica	29.48	1.00e-12	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence