iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012891

Ensembl Protein ID

ENSBTAP00000003725.5

UniProt Accession

F1MG10; F1MG10_BOVIN

Genbank Protein ID

ENSBTAP00000003725

Protein Name

COP9 signalosome complex subunit 6

Genbank Nucleotide ID

DAAA02058286

Gene Name

COPS6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000002871.5	ENSBTAT00000003725.5	ENSBTAP00000003725.5

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	91.92	3.00e-154	541.00	IUUC-Dre-028843

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MAATAAAANG TGGSSGMEVD AAVVPSVMAS GVTGSVSVAL HPLVILNISD HWIRMRSQEG 60
RPMQVIGALI GKQEGRNIEV MNSFELLSHT VEEKIIIDKE YYYTKEEQFK QVFKELEFLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGCTGGCG GGCGCGGGGG AAATGGCGGC GACGGCGGCA GCGGCGAACG GGACTGGAGG 60
GAGCAGCGGG ATGGAGGTGG ATGCTGCAGG TAACGGGCCG TGCGGGGGCG GCTTCTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR033859--MPN_CSN6
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0008180--C:COP9 signalosome
GO:0070062--C:extracellular exosome
GO:0005654--C:nucleoplasm
GO:0000338--P:protein deneddylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000900	Aegilops tauschii	36.72	6.00e-56	211.00
IUUC-Aml-001678	Ailuropoda melanoleuca	100.00	3.00e-176	610.00
IUUC-Atr-002442	Amborella trichopoda	39.23	2.00e-50	192.00
IUUC-Aca-004366	Anolis carolinensis	71.91	5.00e-93	333.00
IUUC-Aly-005748	Arabidopsis lyrata	38.51	4.00e-60	224.00
IUUC-Ath-006830	Arabidopsis thaliana	38.19	3.00e-58	218.00
IUUC-Acl-008087	Aspergillus clavatus	29.97	4.00e-26	112.00
IUUC-Afl-008629	Aspergillus flavus	28.36	6.00e-21	94.70
IUUC-Afu-008973	Aspergillus fumigatus	30.00	2.00e-29	122.00
IUUC-Ani-009239	Aspergillus nidulans	27.81	8.00e-20	91.30
IUUC-Ang-009845	Aspergillus niger	31.33	7.00e-31	127.00
IUUC-Aor-010137	Aspergillus oryzae	29.01	4.00e-24	105.00
IUUC-Ate-010588	Aspergillus terreus	36.36	8.00e-23	101.00
IUUC-Ame-011532	Astyanax mexicanus	93.88	1.00e-52	196.00
IUUC-Bgr-012126	Blumeria graminis	30.21	3.00e-20	92.80
IUUC-Bci-013650	Botrytis cinerea	28.69	7.00e-29	121.00
IUUC-Bdi-014189	Brachypodium distachyon	40.69	1.00e-56	213.00
IUUC-Bol-015194	Brassica oleracea	37.74	2.00e-59	222.00
IUUC-Bra-017180	Brassica rapa	38.44	6.00e-59	220.00
IUUC-Cel-018511	Caenorhabditis elegans	33.72	8.00e-32	131.00
IUUC-Cja-019862	Callithrix jacchus	99.04	8.00e-176	609.00
IUUC-Cfa-020552	Canis familiaris	100.00	9.00e-176	608.00
IUUC-Cpo-022433	Cavia porcellus	99.68	3.00e-177	613.00
IUUC-Cre-022699	Chlamydomonas reinhardtii	35.02	4.00e-46	177.00
IUUC-Csa-023484	Chlorocebus sabaeus	99.04	7.00e-176	609.00
IUUC-Cho-024874	Choloepus hoffmanni	85.91	2.00e-129	454.00
IUUC-Cin-025747	Ciona intestinalis	57.98	9.00e-102	363.00
IUUC-Csv-025914	Ciona savignyi	59.33	4.00e-105	374.00
IUUC-Cgl-026665	Colletotrichum gloeosporioides	28.35	5.00e-27	115.00
IUUC-Cne-026818	Cryptococcus neoformans	36.21	4.00e-49	188.00
IUUC-Dre-028843	Danio rerio	91.92	2.00e-165	574.00
IUUC-Dno-029674	Dasypus novemcinctus	100.00	1.00e-177	615.00
IUUC-Dme-032196	Drosophila melanogaster	61.95	5.00e-117	414.00
IUUC-Ete-032593	Echinops telfairi	72.56	6.00e-74	270.00
IUUC-Eca-033933	Equus caballus	100.00	4.00e-178	616.00
IUUC-Fca-035946	Felis catus	100.00	4.00e-176	610.00
IUUC-Fso-038175	Fusarium solani	26.23	3.00e-22	99.40
IUUC-Gmo-038747	Gadus morhua	90.94	2.00e-162	564.00
IUUC-Gac-042199	Gasterosteus aculeatus	90.61	5.00e-162	563.00
IUUC-Gma-043702	Glycine max	40.13	2.00e-61	229.00
IUUC-Ggo-044978	Gorilla gorilla	99.34	3.00e-171	593.00
IUUC-Hsa-045797	Homo sapiens	99.04	1.00e-174	605.00
IUUC-Hvu-047511	Hordeum vulgare	39.68	1.00e-59	223.00
IUUC-Itr-048615	Ictidomys tridecemlineatus	99.36	1.00e-175	608.00
IUUC-Lch-049546	Latimeria chalumnae	87.40	4.00e-130	456.00
IUUC-Lpe-051207	Leersia perrieri	39.60	5.00e-59	221.00
IUUC-Loc-052106	Lepisosteus oculatus	92.88	1.00e-164	572.00
IUUC-Lma-053122	Leptosphaeria maculans	33.33	1.00e-21	97.80
IUUC-Laf-054454	Loxodonta africana	100.00	9.00e-170	588.00
IUUC-Mcc-054679	Macaca mulatta	99.35	8.00e-173	599.00
IUUC-Meu-056427	Macropus eugenii	95.78	6.00e-168	583.00
IUUC-Mor-057093	Magnaporthe oryzae	24.13	6.00e-24	105.00
IUUC-Mtr-058343	Medicago truncatula	40.32	9.00e-61	226.00
IUUC-Mla-059002	Melampsora laricipopulina	36.04	9.00e-43	167.00
IUUC-Mvi-060487	Microbotryum violaceum	35.86	5.00e-52	197.00
IUUC-Mmr-060577	Microcebus murinus	100.00	1.00e-177	615.00
IUUC-Mdo-061918	Monodelphis domestica	99.35	3.00e-175	607.00
IUUC-Mmu-063355	Mus musculus	99.68	2.00e-174	604.00
IUUC-Mac-064465	Musa acuminata	41.39	2.00e-62	232.00
IUUC-Mpu-066813	Mustela putorius furo	100.00	6.00e-176	609.00
IUUC-Mlu-067500	Myotis lucifugus	99.68	3.00e-177	613.00
IUUC-Nfi-068452	Neosartorya fischeri	28.98	3.00e-29	122.00
IUUC-Nle-070166	Nomascus leucogenys	99.68	1.00e-175	608.00
IUUC-Opr-071028	Ochotona princeps	100.00	1.00e-177	615.00
IUUC-Ont-072575	Oreochromis niloticus	92.56	1.00e-164	572.00
IUUC-Ocu-074744	Oryctolagus cuniculus	99.03	3.00e-176	610.00
IUUC-Oba-075665	Oryza barthii	39.47	1.00e-59	223.00
IUUC-Obr-076094	Oryza brachyantha	40.16	5.00e-51	194.00
IUUC-Ogl-077223	Oryza glaberrima	39.47	1.00e-59	223.00
IUUC-Ogu-077975	Oryza glumaepatula	39.47	1.00e-59	223.00
IUUC-Oin-079690	Oryza indica	39.14	6.00e-57	214.00
IUUC-Ome-081114	Oryza meridionalis	39.60	1.00e-58	219.00
IUUC-Oni-082275	Oryza nivara	39.47	4.00e-58	218.00
IUUC-Opu-083281	Oryza punctata	39.34	2.00e-58	219.00
IUUC-Oru-084767	Oryza rufipogon	39.47	2.00e-58	219.00
IUUC-Osa-085506	Oryza sativa	39.47	2.00e-58	219.00
IUUC-Ola-086468	Oryzias latipes	90.54	2.00e-163	567.00
IUUC-Oga-088732	Otolemur garnettii	98.41	1.00e-175	608.00
IUUC-Oar-089714	Ovis aries	100.00	3.00e-172	597.00
IUUC-Ptr-091383	Pan troglodytes	99.36	1.00e-176	611.00
IUUC-Pan-091752	Papio anubis	99.04	7.00e-176	609.00
IUUC-Psi-094080	Pelodiscus sinensis	92.72	5.00e-169	586.00
IUUC-Pma-094665	Petromyzon marinus	75.34	7.00e-28	115.00
IUUC-Ppa-095312	Physcomitrella patens	43.06	2.00e-68	251.00
IUUC-Pfo-096180	Poecilia formosa	92.56	6.00e-165	572.00
IUUC-Pab-098521	Pongo abelii	99.36	5.00e-177	613.00
IUUC-Pop-099014	Populus trichocarpa	41.61	1.00e-61	229.00
IUUC-Pca-100331	Procavia capensis	99.23	4.00e-155	540.00
IUUC-Ppe-101223	Prunus persica	36.31	2.00e-54	206.00
IUUC-Pva-103061	Pteropus vampyrus	100.00	1.00e-177	615.00
IUUC-Pgr-103302	Puccinia graminis	33.66	3.00e-38	152.00
IUUC-Ptt-103773	Puccinia triticina	34.97	2.00e-43	169.00
IUUC-Pte-104297	Pyrenophora teres	34.16	6.00e-22	98.60
IUUC-Rno-105606	Rattus norvegicus	99.35	2.00e-173	601.00
IUUC-Sha-106621	Sarcophilus harrisii	99.35	2.00e-175	608.00
IUUC-Ssl-108446	Sclerotinia sclerotiorum	29.17	5.00e-27	115.00
IUUC-Smo-108791	Selaginella moellendorffii	42.32	2.00e-63	236.00
IUUC-Sit-110800	Setaria italica	39.67	5.00e-58	218.00
IUUC-Sly-111003	Solanum lycopersicum	39.54	3.00e-60	225.00
IUUC-Stu-112083	Solanum tuberosum	39.80	9.00e-61	226.00
IUUC-Sar-113677	Sorex araneus	81.16	4.00e-27	115.00
IUUC-Sbi-113936	Sorghum bicolor	38.96	2.00e-57	215.00
IUUC-Sre-114955	Sporisorium reilianum	35.36	2.00e-50	192.00
IUUC-Tru-118518	Takifugu rubripes	91.59	6.00e-164	569.00
IUUC-Tsy-119285	Tarsius syrichta	100.00	7.00e-24	103.00
IUUC-Tni-120511	Tetraodon nigroviridis	91.91	2.00e-164	571.00
IUUC-Tca-121233	Theobroma cacao	38.85	5.00e-60	224.00
IUUC-Tae-123297	Triticum aestivum	39.68	6.00e-60	224.00
IUUC-Tur-126485	Triticum urartu	32.80	1.00e-41	163.00
IUUC-Tme-127071	Tuber melanosporum	32.42	1.00e-34	140.00
IUUC-Tbe-127457	Tupaia belangeri	96.46	2.00e-165	574.00
IUUC-Ttr-128708	Tursiops truncatus	96.35	6.00e-163	566.00
IUUC-Uma-129646	Ustilago maydis	35.96	3.00e-53	201.00
IUUC-Vpa-130606	Vicugna pacos	97.14	2.00e-77	281.00
IUUC-Vvi-131045	Vitis vinifera	39.48	4.00e-60	224.00
IUUC-Xtr-132674	Xenopus tropicalis	91.61	1.00e-174	605.00
IUUC-Xma-133413	Xiphophorus maculatus	92.23	1.00e-164	572.00
IUUC-Yli-134661	Yarrowia lipolytica	36.97	9.00e-32	130.00
IUUC-Zma-135166	Zea mays	39.16	1.00e-57	216.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence