iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114569

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G246300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g031400	Sb06g031400.1	Sb06g031400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-07	31.1	73	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  f+    ++vlp C H+fh++C+  w         + +CP+Cr
   Q: 73   CAVCLGNFDAAelLRVLPaCRHAFHTECVDTW------LLAHSTCPVCR 115
           ********5544488899**************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGMLTAVLLA LFLFLIYAKH CKERGPGEGA GGLGLGFAPS SCDRCHSGLS SSAVGALPAV 60
RFGDGDSGRA TECAVCLGNF DAAELLRVLP ACRHAFHTEC VDTWLLAHST CPVCRRRVTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATGC TCACGGCCGT GCTCCTGGCG CTCTTCCTCT TCCTCATCTA CGCCAAGCAC 60
TGCAAGGAGC GCGGCCCCGG CGAGGGCGCC GGCGGCCTGG GCCTCGGGTT CGCGCCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g028540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dno-030071	Dasypus novemcinctus	52.17	5.00e-16	78.20
IUUC-Fca-036360	Felis catus	50.72	6.00e-16	77.80
IUUC-Lpe-050698	Leersia perrieri	50.62	7.00e-28	115.00
IUUC-Laf-054239	Loxodonta africana	38.38	4.00e-15	74.70
IUUC-Mmr-061622	Microcebus murinus	47.83	6.00e-16	75.10
IUUC-Mpu-066508	Mustela putorius furo	50.72	7.00e-16	77.80
IUUC-Mlu-068210	Myotis lucifugus	52.17	4.00e-16	78.60
IUUC-Nle-069124	Nomascus leucogenys	50.72	2.00e-15	76.30
IUUC-Opr-071167	Ochotona princeps	50.72	5.00e-16	77.80
IUUC-Oan-073236	Ornithorhynchus anatinus	44.87	1.00e-15	77.00
IUUC-Ocu-074801	Oryctolagus cuniculus	50.72	1.00e-15	76.60
IUUC-Opu-084048	Oryza punctata	51.60	1.00e-31	129.00
IUUC-Pab-098133	Pongo abelii	50.72	6.00e-16	77.00
IUUC-Pca-100961	Procavia capensis	50.72	1.00e-15	77.00
IUUC-Pva-102987	Pteropus vampyrus	52.17	4.00e-16	78.60
IUUC-Sit-110406	Setaria italica	67.46	3.00e-56	210.00
IUUC-Tsy-118915	Tarsius syrichta	37.78	1.00e-14	72.40
IUUC-Tae-124911	Triticum aestivum	59.31	4.00e-29	119.00
IUUC-Tbe-127519	Tupaia belangeri	50.72	7.00e-16	77.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence