iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105150

Ensembl Protein ID

ENSRNOP00000071137.1

UniProt Accession

D3ZTN3; D3ZTN3_RAT

Genbank Protein ID

EDM04985.1

Protein Name

B-cell CLL/lymphoma 6B; Similar to BAZF (Predicted)

Genbank Nucleotide ID

AABR07029870

Gene Name

Bcl6b; RGD1563179_predicted; rCG_33355

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000059956.1	ENSRNOT00000090338.1	ENSRNOP00000071137.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.00e-10	42.2	38	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikd.vqpevfrallkFlYtgklden 68
           +Dv+l vgg+  +ahk+vL a+S +Fy+ f +    +   +   + +  ++  f  ll+F+Yt++l+++
   Q: 38   TDVTLLVGGQPLRAHKAVLIACSGFFYSIFRGRAGVG--VDVLSLPGgPEARGFAPLLDFMYTSRLRLS 104
           7*******************************99987..689999966*****************9875 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGSTAAPEGA LGYVREFTRH SSDVLSNLNE LRLRGILTDV TLLVGGQPLR AHKAVLIACS 60
GFFYSIFRGR AGVGVDVLSL PGGPEARGFA PLLDFMYTSR LRLSPATAPA VLAAATYLQM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGCCTGGG TCGCTATGGG TTCCACAGCG GCCCCAGAGG GAGCTCTGGG CTACGTCCGA 60
GAGTTCACCC GCCACTCCTC CGACGTGCTT AGCAATCTGA ATGAGTTGCG CCTGCGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50097--BTB
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227--F:transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0042127--P:regulation of cell proliferation
GO:0050727--P:regulation of inflammatory response
GO:0042092--P:type 2 immune response

KEGG

rno:360551

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002419	Ailuropoda melanoleuca	88.89	0.00e+00	705.00
IUUC-Bta-013175	Bos taurus	87.82	0.00e+00	732.00
IUUC-Cja-018749	Callithrix jacchus	88.08	0.00e+00	752.00
IUUC-Cfa-020386	Canis familiaris	90.13	0.00e+00	716.00
IUUC-Csa-023792	Chlorocebus sabaeus	88.89	0.00e+00	740.00
IUUC-Cho-025094	Choloepus hoffmanni	85.37	3.00e-100	358.00
IUUC-Dno-029013	Dasypus novemcinctus	87.00	0.00e+00	727.00
IUUC-Dor-030873	Dipodomys ordii	90.36	0.00e+00	785.00
IUUC-Ete-033032	Echinops telfairi	84.28	2.00e-174	605.00
IUUC-Eca-034190	Equus caballus	89.57	4.00e-160	557.00
IUUC-Fca-036275	Felis catus	84.53	2.00e-135	476.00
IUUC-Gac-042094	Gasterosteus aculeatus	51.66	2.00e-110	392.00
IUUC-Ggo-045349	Gorilla gorilla	89.79	0.00e+00	768.00
IUUC-Hsa-046420	Homo sapiens	89.98	0.00e+00	768.00
IUUC-Itr-048884	Ictidomys tridecemlineatus	87.42	0.00e+00	764.00
IUUC-Laf-053423	Loxodonta africana	88.68	0.00e+00	751.00
IUUC-Mcc-054929	Macaca mulatta	88.68	0.00e+00	740.00
IUUC-Meu-056583	Macropus eugenii	69.04	2.00e-163	568.00
IUUC-Mdo-062982	Monodelphis domestica	80.61	1.00e-91	330.00
IUUC-Mmu-064402	Mus musculus	95.80	0.00e+00	837.00
IUUC-Mpu-066664	Mustela putorius furo	88.68	0.00e+00	744.00
IUUC-Mlu-067140	Myotis lucifugus	84.52	0.00e+00	712.00
IUUC-Nle-069642	Nomascus leucogenys	89.12	0.00e+00	759.00
IUUC-Opr-070308	Ochotona princeps	86.79	0.00e+00	699.00
IUUC-Ocu-074174	Oryctolagus cuniculus	77.63	4.00e-117	414.00
IUUC-Oga-088996	Otolemur garnettii	53.41	8.00e-117	414.00
IUUC-Oar-090313	Ovis aries	85.71	0.00e+00	726.00
IUUC-Ptr-090601	Pan troglodytes	89.98	0.00e+00	768.00
IUUC-Pan-092651	Papio anubis	88.68	0.00e+00	740.00
IUUC-Pab-098548	Pongo abelii	90.15	0.00e+00	772.00
IUUC-Pca-100214	Procavia capensis	84.70	0.00e+00	701.00
IUUC-Pva-103170	Pteropus vampyrus	76.15	1.00e-164	572.00
IUUC-Sha-107591	Sarcophilus harrisii	67.96	2.00e-164	572.00
IUUC-Sar-113228	Sorex araneus	79.66	5.00e-179	620.00
IUUC-Ssc-116067	Sus scrofa	88.02	0.00e+00	718.00
IUUC-Tru-117948	Takifugu rubripes	49.70	2.00e-110	392.00
IUUC-Tsy-119245	Tarsius syrichta	86.63	7.00e-170	589.00
IUUC-Tbe-127318	Tupaia belangeri	89.73	0.00e+00	751.00
IUUC-Ttr-128316	Tursiops truncatus	88.07	2.00e-178	618.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence