iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099595

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_719424; POPTR_0007s12280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s12280	POPTR_0007s12280.1	POPTR_0007s12280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.70e-07	29.9	28	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           +f C I +el rdP v+ +G+ y   ++ +wl   s  ++cPv+++ ++ee+lvP 
   Q: 28   DFECNICFELARDPIVTLCGHLYCWPCLYQWLhlHSHSHECPVCKAIIQEEKLVPL 83
           699*****************************65344448**************96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESGFAESTS VPPERSSYSS NNGNDAGDFE CNICFELARD PIVTLCGHLY CWPCLYQWLH 60
LHSHSHECPV CKAIIQEEKL VPLYGRGNSQ SDPRSKSYPG IDIPSRPSGQ RPETAPPPDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAAAAG GGAAACTATA AAAAAACTCT GTTTTTTCTT CTCTCTCTCG ATCAGGGTGA 60
GTGAAGTTTT GCTTTGACTG TTTTATTGCT TGTGGTTTAT GTATGATTTG GGTTGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s12280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	54.21	6.00e-27	113.00
IUUC-Apl-003744	Anas platyrhynchos	57.14	5.00e-23	98.60
IUUC-Aca-004254	Anolis carolinensis	56.98	5.00e-25	105.00
IUUC-Ame-011316	Astyanax mexicanus	50.93	1.00e-26	112.00
IUUC-Bta-013109	Bos taurus	53.27	2.00e-26	110.00
IUUC-Cel-018228	Caenorhabditis elegans	49.57	5.00e-29	120.00
IUUC-Cja-019136	Callithrix jacchus	57.14	5.00e-23	100.00
IUUC-Cfa-020079	Canis familiaris	58.62	1.00e-26	111.00
IUUC-Cpo-021347	Cavia porcellus	57.14	5.00e-23	100.00
IUUC-Csa-023595	Chlorocebus sabaeus	54.21	7.00e-27	112.00
IUUC-Dre-028094	Danio rerio	55.71	2.00e-22	98.20
IUUC-Dno-029402	Dasypus novemcinctus	57.14	5.00e-23	100.00
IUUC-Dor-030373	Dipodomys ordii	57.14	5.00e-23	100.00
IUUC-Eca-033642	Equus caballus	50.43	1.00e-27	115.00
IUUC-Fca-036326	Felis catus	60.00	1.00e-26	112.00
IUUC-Fal-037085	Ficedula albicollis	54.67	3.00e-23	100.00
IUUC-Gac-041719	Gasterosteus aculeatus	52.86	4.00e-22	97.10
IUUC-Ggo-045474	Gorilla gorilla	54.21	5.00e-27	113.00
IUUC-Hsa-046046	Homo sapiens	54.21	5.00e-27	113.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	50.43	1.00e-27	115.00
IUUC-Lch-050658	Latimeria chalumnae	57.14	8.00e-23	99.40
IUUC-Laf-053395	Loxodonta africana	54.21	1.00e-26	112.00
IUUC-Mcc-054833	Macaca mulatta	54.21	7.00e-27	112.00
IUUC-Meu-055984	Macropus eugenii	59.46	1.00e-22	98.20
IUUC-Mmr-061662	Microcebus murinus	47.95	6.00e-15	73.20
IUUC-Mdo-062437	Monodelphis domestica	56.99	3.00e-28	117.00
IUUC-Mmu-064159	Mus musculus	55.14	3.00e-27	114.00
IUUC-Mlu-067689	Myotis lucifugus	41.38	3.00e-27	114.00
IUUC-Nle-069705	Nomascus leucogenys	54.21	5.00e-27	113.00
IUUC-Opr-070197	Ochotona princeps	57.58	2.00e-21	94.70
IUUC-Ont-072482	Oreochromis niloticus	51.85	1.00e-27	115.00
IUUC-Oan-073480	Ornithorhynchus anatinus	57.14	5.00e-23	100.00
IUUC-Ocu-074208	Oryctolagus cuniculus	53.27	2.00e-26	110.00
IUUC-Ola-086507	Oryzias latipes	48.31	7.00e-28	116.00
IUUC-Olu-087623	Ostreococcus lucimarinus	51.52	4.00e-17	80.50
IUUC-Oar-090284	Ovis aries	53.27	2.00e-26	110.00
IUUC-Ptr-090919	Pan troglodytes	54.21	6.00e-27	112.00
IUUC-Pan-092843	Papio anubis	54.21	7.00e-27	112.00
IUUC-Psi-093323	Pelodiscus sinensis	57.14	5.00e-23	100.00
IUUC-Pfo-096818	Poecilia formosa	50.93	3.00e-27	114.00
IUUC-Pab-098244	Pongo abelii	54.21	6.00e-27	112.00
IUUC-Pca-100319	Procavia capensis	54.21	4.00e-27	113.00
IUUC-Pva-102249	Pteropus vampyrus	54.21	6.00e-27	112.00
IUUC-Rno-106042	Rattus norvegicus	55.14	3.00e-27	114.00
IUUC-Sar-113669	Sorex araneus	55.32	5.00e-12	61.60
IUUC-Ssc-115934	Sus scrofa	54.21	6.00e-27	112.00
IUUC-Tgu-116886	Taeniopygia guttata	54.67	3.00e-23	100.00
IUUC-Tsy-119615	Tarsius syrichta	50.00	4.00e-28	116.00
IUUC-Tbe-127360	Tupaia belangeri	57.14	5.00e-23	99.40
IUUC-Ttr-129044	Tursiops truncatus	57.14	5.00e-23	100.00
IUUC-Vpa-130365	Vicugna pacos	55.71	4.00e-22	97.10
IUUC-Vvi-131725	Vitis vinifera	62.17	4.00e-78	283.00
IUUC-Xtr-132608	Xenopus tropicalis	62.86	3.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence