iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-104966

Ensembl Protein ID

ENSRNOP00000066033.2

UniProt Accession

M0R971; M0R971_RAT

Genbank Protein ID

ENSRNOP00000066033

Protein Name

E3 ubiquitin-protein ligase RNF130

Genbank Nucleotide ID

AABR07029581

Gene Name

Rnf130

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000046330.2	ENSRNOT00000071917.2	ENSRNOP00000066033.2

Annotation

DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-08	33.2	181	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e++  d ++vlpC+Hvfh++C+  w       s + +CP C+
   Q: 181  CAVCIESYeNDVVRVLPCKHVFHKSCVDPW------LSEHCTCPMCK 221
           ********555599****************......**********6 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

VADHLGCDPQ TRFFVPPNIK QWIALLQRGN CTFKEKISRA AFHNAVAVVI YNNKSKEEPV 60
TMTHPGTGDI IAVMITELRG KDILSYLEKN ISVQMTIAVG TRMPPKNFSR GSLVFVSISF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCTGATC ATCTGGGCTG TGATCCTCAA ACACGGTTCT TTGTCCCTCC TAATATCAAA 60
CAGTGGATCG CCTTGCTCCA AAGAGGAAAT TGCACCTTTA AAGAAAAAAT ATCACGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0012501--P:programmed cell death

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001953	Ailuropoda melanoleuca	92.88	0.00e+00	649.00
IUUC-Apl-003520	Anas platyrhynchos	84.04	2.00e-167	581.00
IUUC-Aca-005099	Anolis carolinensis	79.82	6.00e-151	526.00
IUUC-Ame-010838	Astyanax mexicanus	67.79	3.00e-119	421.00
IUUC-Bta-013574	Bos taurus	92.88	0.00e+00	652.00
IUUC-Cja-019048	Callithrix jacchus	92.28	0.00e+00	642.00
IUUC-Cfa-020217	Canis familiaris	93.09	0.00e+00	641.00
IUUC-Cpo-021540	Cavia porcellus	91.69	0.00e+00	640.00
IUUC-Csa-023073	Chlorocebus sabaeus	93.77	0.00e+00	654.00
IUUC-Cho-024861	Choloepus hoffmanni	90.18	0.00e+00	631.00
IUUC-Dre-028252	Danio rerio	68.28	6.00e-130	457.00
IUUC-Dno-029343	Dasypus novemcinctus	91.67	4.00e-150	523.00
IUUC-Dor-030591	Dipodomys ordii	93.75	0.00e+00	655.00
IUUC-Ete-032447	Echinops telfairi	91.67	3.00e-173	600.00
IUUC-Eca-034368	Equus caballus	93.09	0.00e+00	643.00
IUUC-Eeu-034965	Erinaceus europaeus	84.52	2.00e-167	581.00
IUUC-Fca-036053	Felis catus	93.18	0.00e+00	650.00
IUUC-Fal-037232	Ficedula albicollis	83.48	5.00e-165	573.00
IUUC-Fox-037731	Fusarium oxysporum	44.83	5.00e-12	64.30
IUUC-Gmo-039437	Gadus morhua	67.15	5.00e-109	387.00
IUUC-Gga-041046	Gallus gallus	80.98	1.00e-147	515.00
IUUC-Gac-042488	Gasterosteus aculeatus	60.00	2.00e-110	392.00
IUUC-Ggo-044560	Gorilla gorilla	93.39	0.00e+00	643.00
IUUC-Hsa-046224	Homo sapiens	93.77	0.00e+00	654.00
IUUC-Itr-048004	Ictidomys tridecemlineatus	94.07	0.00e+00	658.00
IUUC-Lch-050557	Latimeria chalumnae	75.00	5.00e-149	520.00
IUUC-Loc-052249	Lepisosteus oculatus	74.78	1.00e-153	536.00
IUUC-Laf-053702	Loxodonta africana	93.39	4.00e-179	620.00
IUUC-Mcc-054898	Macaca mulatta	92.43	4.00e-168	584.00
IUUC-Meu-056040	Macropus eugenii	76.44	1.00e-133	469.00
IUUC-Mga-059957	Meleagris gallopavo	83.09	2.00e-168	584.00
IUUC-Mdo-061837	Monodelphis domestica	88.39	3.00e-170	590.00
IUUC-Mmu-063790	Mus musculus	94.07	0.00e+00	628.00
IUUC-Mpu-066143	Mustela putorius furo	92.88	0.00e+00	649.00
IUUC-Mlu-067291	Myotis lucifugus	91.96	4.00e-178	617.00
IUUC-Nle-069370	Nomascus leucogenys	92.28	0.00e+00	645.00
IUUC-Opr-070433	Ochotona princeps	75.07	1.00e-140	493.00
IUUC-Ont-071771	Oreochromis niloticus	58.39	7.00e-96	343.00
IUUC-Oan-073414	Ornithorhynchus anatinus	86.96	2.00e-144	504.00
IUUC-Ocu-074318	Oryctolagus cuniculus	93.15	0.00e+00	651.00
IUUC-Oba-075528	Oryza barthii	38.89	1.00e-12	67.40
IUUC-Ola-086879	Oryzias latipes	61.39	1.00e-102	366.00
IUUC-Olu-087632	Ostreococcus lucimarinus	41.51	2.00e-09	55.10
IUUC-Oga-088211	Otolemur garnettii	91.99	2.00e-176	612.00
IUUC-Oar-089978	Ovis aries	92.56	0.00e+00	646.00
IUUC-Ptr-091586	Pan troglodytes	93.77	0.00e+00	654.00
IUUC-Psi-094023	Pelodiscus sinensis	82.79	4.00e-167	580.00
IUUC-Pab-098663	Pongo abelii	91.80	9.00e-168	582.00
IUUC-Pop-098838	Populus trichocarpa	28.12	7.00e-13	68.20
IUUC-Pca-100960	Procavia capensis	91.96	2.00e-175	607.00
IUUC-Pva-102567	Pteropus vampyrus	89.91	1.00e-172	598.00
IUUC-Pgr-103645	Puccinia graminis	48.89	1.00e-09	56.60
IUUC-Sha-106505	Sarcophilus harrisii	87.68	2.00e-135	474.00
IUUC-Ssc-116294	Sus scrofa	92.28	2.00e-148	517.00
IUUC-Tgu-117464	Taeniopygia guttata	83.78	3.00e-166	577.00
IUUC-Tni-120175	Tetraodon nigroviridis	56.62	4.00e-92	331.00
IUUC-Tbe-128124	Tupaia belangeri	71.13	3.00e-131	461.00
IUUC-Ttr-128752	Tursiops truncatus	93.15	0.00e+00	646.00
IUUC-Vpa-130764	Vicugna pacos	87.76	3.00e-170	590.00
IUUC-Xtr-132343	Xenopus tropicalis	77.91	7.00e-147	513.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence