iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-117148

Ensembl Protein ID

ENSTGUP00000012846.1

UniProt Accession

H0ZQF8; H0ZQF8_TAEGU

Genbank Protein ID

ENSTGUP00000012846

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01006937

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000012476.1	ENSTGUT00000012992.1	ENSTGUP00000012846.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.90e-09	35.9	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+a+qaL +++n+leaA+++Ll+
   Q: 288  DEKALKHITEMGFSKEAARQALMDNSNSLEAALNFLLN 325
           78999*******************************97 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MAERARAALS ESGWCLSDEG IEACLSSSEK VNTNDIILVA LNTDLRTIGK KFLPSDINGG 60
KVEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHTSCTAIE YSSMSKISLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTGGCCGG CCCGAGCGCC CGGAGAGGCC CGCGGGGTGG GGGAACGAGC GGGCCCCGCG 60
TCCCTCCTCC CCCTGCGAGC GAGTGCCGGG GGTCTCCGCA GCGCCCGCGG CCCCGAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006397--P:mRNA processing

KEGG

tgu:100217625

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.13	2.00e-16	79.70
IUUC-Aml-001751	Ailuropoda melanoleuca	75.99	0.00e+00	1023.00
IUUC-Atr-002788	Amborella trichopoda	32.92	7.00e-22	98.20
IUUC-Apl-004055	Anas platyrhynchos	92.61	0.00e+00	1186.00
IUUC-Aca-004367	Anolis carolinensis	77.05	0.00e+00	1066.00
IUUC-Aly-006072	Arabidopsis lyrata	33.68	2.00e-24	106.00
IUUC-Ath-007491	Arabidopsis thaliana	33.68	5.00e-24	105.00
IUUC-Ame-011439	Astyanax mexicanus	68.23	2.00e-107	382.00
IUUC-Bta-012894	Bos taurus	72.79	0.00e+00	1003.00
IUUC-Bdi-014462	Brachypodium distachyon	33.51	1.00e-22	100.00
IUUC-Bol-015343	Brassica oleracea	33.33	3.00e-24	105.00
IUUC-Bra-016787	Brassica rapa	35.85	3.00e-22	99.00
IUUC-Cel-018154	Caenorhabditis elegans	38.22	2.00e-28	120.00
IUUC-Cja-019364	Callithrix jacchus	73.81	0.00e+00	886.00
IUUC-Cfa-021166	Canis familiaris	74.63	0.00e+00	999.00
IUUC-Cpo-021678	Cavia porcellus	66.72	0.00e+00	741.00
IUUC-Csa-023299	Chlorocebus sabaeus	75.20	0.00e+00	1079.00
IUUC-Cho-024694	Choloepus hoffmanni	85.02	3.00e-125	441.00
IUUC-Cin-025191	Ciona intestinalis	42.80	4.00e-44	170.00
IUUC-Csv-026348	Ciona savignyi	50.98	8.00e-12	61.20
IUUC-Dre-028715	Danio rerio	51.43	2.00e-169	588.00
IUUC-Dno-030091	Dasypus novemcinctus	75.65	0.00e+00	1036.00
IUUC-Dor-030807	Dipodomys ordii	64.32	0.00e+00	724.00
IUUC-Dme-031770	Drosophila melanogaster	33.78	3.00e-42	166.00
IUUC-Ete-032507	Echinops telfairi	55.34	1.00e-149	523.00
IUUC-Eca-033406	Equus caballus	73.16	0.00e+00	806.00
IUUC-Eeu-034600	Erinaceus europaeus	67.33	0.00e+00	746.00
IUUC-Fca-035916	Felis catus	76.33	0.00e+00	1026.00
IUUC-Fal-036658	Ficedula albicollis	95.79	0.00e+00	1306.00
IUUC-Gmo-038974	Gadus morhua	62.30	3.00e-101	362.00
IUUC-Gga-040195	Gallus gallus	91.36	0.00e+00	1330.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.61	1.00e-164	572.00
IUUC-Gma-044234	Glycine max	35.57	8.00e-26	110.00
IUUC-Ggo-044715	Gorilla gorilla	72.87	0.00e+00	899.00
IUUC-Hsa-045814	Homo sapiens	75.64	0.00e+00	1078.00
IUUC-Hvu-047365	Hordeum vulgare	32.81	2.00e-18	86.30
IUUC-Itr-047866	Ictidomys tridecemlineatus	75.51	0.00e+00	1028.00
IUUC-Kpa-049313	Komagataella pastoris	28.57	3.00e-03	36.60
IUUC-Lch-050393	Latimeria chalumnae	62.01	0.00e+00	778.00
IUUC-Lpe-050691	Leersia perrieri	32.20	2.00e-21	96.70
IUUC-Loc-052859	Lepisosteus oculatus	57.10	0.00e+00	692.00
IUUC-Laf-053953	Loxodonta africana	69.82	3.00e-178	617.00
IUUC-Mcc-055846	Macaca mulatta	75.24	0.00e+00	1055.00
IUUC-Meu-056790	Macropus eugenii	63.09	0.00e+00	763.00
IUUC-Mtr-058749	Medicago truncatula	39.47	2.00e-20	93.60
IUUC-Mla-058959	Melampsora laricipopulina	47.06	1.00e-08	53.50
IUUC-Mga-059656	Meleagris gallopavo	90.67	0.00e+00	1234.00
IUUC-Mmr-061089	Microcebus murinus	74.50	0.00e+00	996.00
IUUC-Mdo-063043	Monodelphis domestica	62.96	0.00e+00	671.00
IUUC-Mmu-063654	Mus musculus	70.68	0.00e+00	951.00
IUUC-Mac-064947	Musa acuminata	35.26	8.00e-20	90.90
IUUC-Mpu-066115	Mustela putorius furo	73.53	0.00e+00	811.00
IUUC-Mlu-066974	Myotis lucifugus	72.25	0.00e+00	928.00
IUUC-Nle-069184	Nomascus leucogenys	75.77	0.00e+00	1083.00
IUUC-Opr-070770	Ochotona princeps	64.62	0.00e+00	752.00
IUUC-Ont-072040	Oreochromis niloticus	48.13	1.00e-175	609.00
IUUC-Ocu-074405	Oryctolagus cuniculus	76.01	0.00e+00	1047.00
IUUC-Oba-075977	Oryza barthii	30.61	2.00e-17	83.20
IUUC-Obr-076298	Oryza brachyantha	31.47	2.00e-22	99.80
IUUC-Ogl-077706	Oryza glaberrima	31.12	9.00e-18	84.30
IUUC-Ogu-078381	Oryza glumaepatula	31.00	2.00e-18	86.70
IUUC-Oin-080150	Oryza indica	31.50	4.00e-18	85.10
IUUC-Ome-081153	Oryza meridionalis	30.85	2.00e-17	82.80
IUUC-Oni-083115	Oryza nivara	31.00	2.00e-17	82.80
IUUC-Opu-083860	Oryza punctata	31.16	4.00e-23	102.00
IUUC-Oru-084859	Oryza rufipogon	31.50	7.00e-18	84.70
IUUC-Osa-085567	Oryza sativa	31.50	4.00e-17	82.00
IUUC-Ola-087049	Oryzias latipes	47.58	2.00e-168	585.00
IUUC-Oga-088455	Otolemur garnettii	75.10	0.00e+00	1042.00
IUUC-Oar-090096	Ovis aries	75.38	0.00e+00	1035.00
IUUC-Ptr-090974	Pan troglodytes	73.70	0.00e+00	917.00
IUUC-Pan-092657	Papio anubis	74.93	0.00e+00	1081.00
IUUC-Psi-093113	Pelodiscus sinensis	82.64	0.00e+00	1028.00
IUUC-Ppa-095466	Physcomitrella patens	39.31	1.00e-24	107.00
IUUC-Pfo-096631	Poecilia formosa	47.28	2.00e-167	582.00
IUUC-Pab-098070	Pongo abelii	75.37	0.00e+00	1073.00
IUUC-Pop-099235	Populus trichocarpa	32.32	1.00e-21	97.10
IUUC-Pca-101032	Procavia capensis	66.26	0.00e+00	806.00
IUUC-Ppe-101793	Prunus persica	30.96	2.00e-24	106.00
IUUC-Pva-102290	Pteropus vampyrus	73.35	0.00e+00	894.00
IUUC-Rno-105080	Rattus norvegicus	68.91	0.00e+00	769.00
IUUC-Sce-106191	Saccharomyces cerevisiae	41.46	1.00e-03	37.70
IUUC-Sha-107598	Sarcophilus harrisii	73.81	0.00e+00	1012.00
IUUC-Sit-110735	Setaria italica	29.15	3.00e-20	92.40
IUUC-Sly-111126	Solanum lycopersicum	35.05	2.00e-21	96.30
IUUC-Stu-112780	Solanum tuberosum	36.92	2.00e-25	109.00
IUUC-Sar-113418	Sorex araneus	72.74	0.00e+00	862.00
IUUC-Sbi-113925	Sorghum bicolor	31.16	3.00e-22	99.00
IUUC-Ssc-115712	Sus scrofa	76.17	0.00e+00	1067.00
IUUC-Tru-117831	Takifugu rubripes	48.12	6.00e-168	584.00
IUUC-Tsy-118917	Tarsius syrichta	71.71	0.00e+00	823.00
IUUC-Tni-120783	Tetraodon nigroviridis	46.95	4.00e-168	584.00
IUUC-Tca-121430	Theobroma cacao	35.33	7.00e-10	58.20
IUUC-Tae-123752	Triticum aestivum	34.13	1.00e-16	80.50
IUUC-Tur-126238	Triticum urartu	33.85	3.00e-17	82.40
IUUC-Ttr-128615	Tursiops truncatus	68.10	0.00e+00	791.00
IUUC-Vpa-130531	Vicugna pacos	75.19	0.00e+00	903.00
IUUC-Vvi-131607	Vitis vinifera	35.26	5.00e-19	88.20
IUUC-Xtr-132787	Xenopus tropicalis	61.74	0.00e+00	783.00
IUUC-Xma-133815	Xiphophorus maculatus	47.77	8.00e-167	580.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence