iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007384

UUCD1 version

UUC-ArT-00874

Ensembl Protein ID

AT5G52880.1

UniProt Accession

Q9FLX3; FB293_ARATH

Genbank Protein ID

BAB10436.1; AED96271.1; AAL06941.1; AAM91039.1

Protein Name

F-box protein At5g52880

Genbank Nucleotide ID

AB009055; CP002688; AY054282; AY132006

Gene Name

At5g52880; MXC20.10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G52880	AT5G52880.1	AT5G52880.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	31.94	6.10e-02	35.80	IUUC-Hsa-045977

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKRYQNLKVG EAFSKNRIYP FACNELSSIL NLAYSLSPKN VKALIFQDTL SAFRLLPDIN 60
TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR RSKNREEEDI DIPSLPQDIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGTTTGAT TTGGAATTAA GTAAATTACA CAAAACCGAT ACAATGATTA AAGAACCTTG 60
ACGTCGACGA TGATTGTGTG ATCTCCCCAG AAAAGAGAAA TGAAGAGATA CCAAAATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G52880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001552	Ailuropoda melanoleuca	32.86	1.00e-05	43.90
IUUC-Atr-002801	Amborella trichopoda	41.57	2.00e-52	198.00
IUUC-Aca-005353	Anolis carolinensis	33.33	6.00e-08	51.60
IUUC-Aly-005579	Arabidopsis lyrata	89.81	9.00e-122	428.00
IUUC-Ago-007783	Ashbya gossypii	28.57	4.30e-02	32.70
IUUC-Ame-011238	Astyanax mexicanus	39.06	3.00e-06	45.80
IUUC-Bdi-014933	Brachypodium distachyon	32.14	4.00e-07	47.40
IUUC-Bol-015838	Brassica oleracea	75.31	6.00e-100	356.00
IUUC-Bra-017713	Brassica rapa	37.21	1.00e-04	39.30
IUUC-Cja-019876	Callithrix jacchus	31.94	7.00e-06	44.70
IUUC-Cfa-020674	Canis familiaris	31.94	7.00e-06	44.70
IUUC-Csa-023044	Chlorocebus sabaeus	33.33	1.00e-05	43.90
IUUC-Cho-024975	Choloepus hoffmanni	35.71	2.00e-06	46.60
IUUC-Dre-028332	Danio rerio	37.50	1.00e-05	43.50
IUUC-Dno-028870	Dasypus novemcinctus	33.33	8.00e-06	44.30
IUUC-Dor-030514	Dipodomys ordii	32.86	7.00e-06	44.70
IUUC-Ete-032477	Echinops telfairi	40.98	3.00e-08	52.40
IUUC-Fca-035829	Felis catus	32.86	4.00e-06	45.10
IUUC-Gmo-039537	Gadus morhua	36.76	3.00e-07	49.30
IUUC-Gac-042440	Gasterosteus aculeatus	40.82	1.00e-05	43.90
IUUC-Gma-044395	Glycine max	35.00	2.00e-04	38.50
IUUC-Ggo-045342	Gorilla gorilla	31.94	7.00e-06	44.70
IUUC-Hsa-045977	Homo sapiens	31.94	6.00e-06	44.70
IUUC-Itr-048500	Ictidomys tridecemlineatus	33.90	2.00e-05	43.10
IUUC-Kpa-049204	Komagataella pastoris	31.25	1.00e-05	44.70
IUUC-Lch-049981	Latimeria chalumnae	41.67	3.00e-07	48.90
IUUC-Loc-052324	Lepisosteus oculatus	38.10	2.00e-06	46.60
IUUC-Laf-053399	Loxodonta africana	30.56	4.00e-05	42.00
IUUC-Mcc-054813	Macaca mulatta	33.33	1.00e-05	43.90
IUUC-Meu-056017	Macropus eugenii	32.26	3.00e-05	42.40
IUUC-Mtr-058175	Medicago truncatula	49.14	3.00e-54	204.00
IUUC-Mla-059163	Melampsora laricipopulina	25.64	1.00e-03	36.20
IUUC-Mvi-060236	Microbotryum violaceum	33.33	7.00e-05	42.70
IUUC-Mmr-060711	Microcebus murinus	33.33	4.00e-06	45.10
IUUC-Mdo-062234	Monodelphis domestica	33.33	1.00e-05	43.50
IUUC-Mmu-063181	Mus musculus	30.56	1.00e-05	43.50
IUUC-Mpu-066368	Mustela putorius furo	31.94	7.00e-06	44.70
IUUC-Mlu-067492	Myotis lucifugus	32.86	6.00e-06	44.70
IUUC-Nle-069358	Nomascus leucogenys	33.33	9.00e-06	44.30
IUUC-Opr-070436	Ochotona princeps	34.43	3.00e-06	45.80
IUUC-Ont-072618	Oreochromis niloticus	37.88	2.00e-06	46.60
IUUC-Ocu-073808	Oryctolagus cuniculus	35.71	4.00e-07	48.50
IUUC-Obr-076082	Oryza brachyantha	51.61	5.00e-03	35.00
IUUC-Osa-086103	Oryza sativa	42.11	5.00e-05	39.30
IUUC-Ola-086567	Oryzias latipes	40.00	1.00e-06	47.40
IUUC-Oga-088421	Otolemur garnettii	33.82	5.00e-06	45.10
IUUC-Oar-090192	Ovis aries	33.33	3.00e-05	43.10
IUUC-Ptr-091390	Pan troglodytes	31.94	6.00e-06	44.70
IUUC-Pan-092155	Papio anubis	33.33	1.00e-05	43.90
IUUC-Pno-094906	Phaeosphaeria nodorum	25.74	3.00e-03	38.10
IUUC-Ppa-095448	Physcomitrella patens	26.58	7.00e-19	87.00
IUUC-Pfo-096760	Poecilia formosa	44.44	4.00e-06	45.40
IUUC-Pab-097896	Pongo abelii	31.94	6.00e-06	44.70
IUUC-Ppe-102013	Prunus persica	47.62	2.00e-59	221.00
IUUC-Pva-102705	Pteropus vampyrus	34.72	3.00e-07	48.90
IUUC-Pgr-103283	Puccinia graminis	32.69	5.00e-03	35.80
IUUC-Rno-104827	Rattus norvegicus	31.94	1.00e-05	43.90
IUUC-Sce-106294	Saccharomyces cerevisiae	32.08	4.60e-02	32.70
IUUC-Sha-107356	Sarcophilus harrisii	38.10	2.00e-07	50.10
IUUC-Sja-107879	Schizosaccharomyces japonicus	23.75	4.00e-06	45.80
IUUC-Sly-110947	Solanum lycopersicum	42.08	9.00e-43	166.00
IUUC-Stu-112615	Solanum tuberosum	41.86	5.00e-44	170.00
IUUC-Sar-113189	Sorex araneus	37.88	3.00e-06	45.80
IUUC-Sbi-113808	Sorghum bicolor	41.85	9.00e-46	176.00
IUUC-Sre-115164	Sporisorium reilianum	25.58	3.00e-04	40.80
IUUC-Ssc-115570	Sus scrofa	30.56	3.00e-05	42.40
IUUC-Tgu-116972	Taeniopygia guttata	37.25	1.00e-04	40.40
IUUC-Tru-117842	Takifugu rubripes	43.14	2.00e-06	46.60
IUUC-Tsy-119232	Tarsius syrichta	31.94	7.00e-06	44.70
IUUC-Tni-120727	Tetraodon nigroviridis	33.33	3.00e-06	45.80
IUUC-Tca-121334	Theobroma cacao	53.12	6.00e-38	149.00
IUUC-Tae-123134	Triticum aestivum	47.06	2.00e-04	40.40
IUUC-Tur-126713	Triticum urartu	37.93	2.00e-26	111.00
IUUC-Ttr-128903	Tursiops truncatus	32.86	6.00e-06	44.70
IUUC-Uma-129641	Ustilago maydis	26.37	5.00e-06	46.60
IUUC-Vvi-131501	Vitis vinifera	43.89	2.00e-59	221.00
IUUC-Xma-133709	Xiphophorus maculatus	44.44	4.00e-06	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence