iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088133

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03040733

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000008284.2	ENSOGAT00000008287.2	ENSOGAP00000007417.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	8.60e-14	51.2	184	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++++++c++ + +   dkLPLP +L+++L+++++
   Q: 184  LW-RPSKVLSLQDLCCRVVVSCTPVHLV---DKLPLPMALRSHLKSFSM 228
           67.99********************888...***************976 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

TMSALGSPVR AYDFLLKFLL VGDSDVGKGE ILASLQDGAA ESPYGHPAGI DYKTTTILLD 60
GRRVKLQLWD TSGQGRFCTI FRSYSRGAQG VILVYDIANR WSFDGINRWI KEIDEHAPGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGATGAGTG CCCTGGGCAG CCCGGTGCGG GCCTACGACT TCTTGCTCAA GTTTCTACTC 60
GTGGGCGACA GCGACGTGGG CAAGGGTGAG ATCCTGGCTA GCCTGCAGGA CGGCGCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003206	Anas platyrhynchos	88.84	8.00e-128	449.00
IUUC-Aca-005004	Anolis carolinensis	86.99	3.00e-136	477.00
IUUC-Ame-011456	Astyanax mexicanus	83.45	1.00e-141	495.00
IUUC-Bta-012683	Bos taurus	88.13	4.00e-147	513.00
IUUC-Cja-018870	Callithrix jacchus	85.97	6.00e-142	496.00
IUUC-Cfa-020527	Canis familiaris	92.38	9.00e-116	409.00
IUUC-Cpo-021644	Cavia porcellus	93.31	7.00e-149	519.00
IUUC-Csa-023150	Chlorocebus sabaeus	94.96	6.00e-159	552.00
IUUC-Cho-024716	Choloepus hoffmanni	90.24	9.00e-87	311.00
IUUC-Dre-028614	Danio rerio	82.08	1.00e-138	484.00
IUUC-Eca-033492	Equus caballus	93.10	5.00e-130	456.00
IUUC-Fca-035705	Felis catus	92.64	8.00e-129	452.00
IUUC-Gga-040925	Gallus gallus	87.77	4.00e-149	520.00
IUUC-Ggo-045012	Gorilla gorilla	86.33	5.00e-143	499.00
IUUC-Hsa-046747	Homo sapiens	94.60	6.00e-158	549.00
IUUC-Loc-052325	Lepisosteus oculatus	84.95	5.00e-145	506.00
IUUC-Laf-053340	Loxodonta africana	89.57	6.00e-149	519.00
IUUC-Mcc-054711	Macaca mulatta	92.53	1.00e-154	538.00
IUUC-Mga-059204	Meleagris gallopavo	87.77	6.00e-149	519.00
IUUC-Mmu-064144	Mus musculus	92.09	1.00e-155	541.00
IUUC-Mpu-066352	Mustela putorius furo	92.67	4.00e-129	453.00
IUUC-Nle-070096	Nomascus leucogenys	93.88	3.00e-156	543.00
IUUC-Opr-070662	Ochotona princeps	90.65	5.00e-150	523.00
IUUC-Ont-072397	Oreochromis niloticus	81.82	1.00e-137	481.00
IUUC-Ocu-074559	Oryctolagus cuniculus	92.09	3.00e-144	504.00
IUUC-Olo-080270	Oryza longistaminata	34.41	2.00e-12	66.60
IUUC-Oar-089702	Ovis aries	86.96	9.00e-120	422.00
IUUC-Ptr-090544	Pan troglodytes	95.02	5.00e-148	516.00
IUUC-Pan-092812	Papio anubis	94.96	6.00e-159	552.00
IUUC-Psi-093120	Pelodiscus sinensis	87.77	9.00e-150	522.00
IUUC-Pab-098735	Pongo abelii	94.96	6.00e-159	552.00
IUUC-Pva-102361	Pteropus vampyrus	92.00	6.00e-139	486.00
IUUC-Rno-105063	Rattus norvegicus	92.81	1.00e-156	545.00
IUUC-Sar-113518	Sorex araneus	87.11	1.00e-129	455.00
IUUC-Ssc-115719	Sus scrofa	89.22	1.00e-142	498.00
IUUC-Tsy-119011	Tarsius syrichta	91.05	9.00e-104	368.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence