iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048953

Ensembl Protein ID

ENSSTOP00000004558.2

UniProt Accession

I3M5F5; I3M5F5_ICTTR

Genbank Protein ID

ENSSTOP00000004558

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01043633

Gene Name

RNF38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000005075.2	ENSSTOT00000005078.2	ENSSTOP00000004558.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.60e-09	35.6	409	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 409  CVVCMCDFESRqlLRVLPCNHEFHAKCVDKW------LKANRTCPICR 450
           ********4434599****************......**********8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

SEDSPSPKRQ RLSHSVFDYT SASPAPSPPM RPWEMTSNRQ PPSVRPSQHH FSGERCNTPA 60
RNRRSPPVRR QRGRRDRLSR HNSISQDENY HHLPYAQQQA IEEPRAFHPP NVSPRLLHPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATATCTCC CGGGGCCAAT TCAGCACCTC TACCTGGCCA TCCTAACAAG GTGATTTGTG 60
AAAGGGTGAG ACTTCAGAGC CTGTTCCCTC TCCTCCCAAG TGATCAGAAC ACTACCGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001752	Ailuropoda melanoleuca	98.92	0.00e+00	722.00
IUUC-Atr-003122	Amborella trichopoda	45.95	3.00e-15	76.30
IUUC-Apl-003246	Anas platyrhynchos	90.20	0.00e+00	721.00
IUUC-Aca-005355	Anolis carolinensis	96.31	0.00e+00	693.00
IUUC-Bta-012401	Bos taurus	97.92	0.00e+00	686.00
IUUC-Bdi-014369	Brachypodium distachyon	37.36	3.00e-16	78.60
IUUC-Cja-018848	Callithrix jacchus	98.70	0.00e+00	761.00
IUUC-Cfa-020501	Canis familiaris	98.84	0.00e+00	685.00
IUUC-Cpo-021722	Cavia porcellus	98.70	0.00e+00	729.00
IUUC-Csa-024088	Chlorocebus sabaeus	99.31	0.00e+00	697.00
IUUC-Cho-024540	Choloepus hoffmanni	79.83	2.00e-155	541.00
IUUC-Dre-028201	Danio rerio	70.23	4.00e-132	465.00
IUUC-Dno-029482	Dasypus novemcinctus	98.70	0.00e+00	724.00
IUUC-Dor-030261	Dipodomys ordii	87.42	0.00e+00	687.00
IUUC-Dse-031302	Dothistroma septosporum	47.73	5.00e-11	62.80
IUUC-Ete-032580	Echinops telfairi	89.59	0.00e+00	650.00
IUUC-Eca-033264	Equus caballus	98.15	0.00e+00	699.00
IUUC-Eeu-035181	Erinaceus europaeus	90.67	0.00e+00	661.00
IUUC-Fca-036484	Felis catus	98.92	0.00e+00	723.00
IUUC-Fal-037568	Ficedula albicollis	95.14	0.00e+00	713.00
IUUC-Gmo-038772	Gadus morhua	62.27	2.00e-130	458.00
IUUC-Gga-040685	Gallus gallus	93.95	0.00e+00	666.00
IUUC-Ggo-044571	Gorilla gorilla	99.35	0.00e+00	736.00
IUUC-Hsa-046118	Homo sapiens	99.35	0.00e+00	736.00
IUUC-Hvu-047245	Hordeum vulgare	45.33	2.00e-15	76.30
IUUC-Lch-050401	Latimeria chalumnae	92.19	0.00e+00	734.00
IUUC-Lpe-051226	Leersia perrieri	44.74	1.00e-15	77.40
IUUC-Loc-052875	Lepisosteus oculatus	85.68	2.00e-160	558.00
IUUC-Lma-052952	Leptosphaeria maculans	33.04	3.00e-11	63.50
IUUC-Laf-054381	Loxodonta africana	98.70	0.00e+00	721.00
IUUC-Mcc-055576	Macaca mulatta	99.35	0.00e+00	736.00
IUUC-Meu-056433	Macropus eugenii	91.08	7.00e-141	493.00
IUUC-Mga-059597	Meleagris gallopavo	91.74	0.00e+00	669.00
IUUC-Mmr-061247	Microcebus murinus	99.13	0.00e+00	734.00
IUUC-Mdo-061822	Monodelphis domestica	97.45	0.00e+00	711.00
IUUC-Mmu-064200	Mus musculus	98.48	0.00e+00	733.00
IUUC-Mac-065545	Musa acuminata	39.18	2.00e-16	79.00
IUUC-Mpu-066571	Mustela putorius furo	98.92	0.00e+00	723.00
IUUC-Mlu-067948	Myotis lucifugus	98.26	0.00e+00	747.00
IUUC-Nle-069466	Nomascus leucogenys	99.35	0.00e+00	736.00
IUUC-Opr-071151	Ochotona princeps	98.39	6.00e-110	390.00
IUUC-Ont-072424	Oreochromis niloticus	66.02	6.00e-129	454.00
IUUC-Oan-073236	Ornithorhynchus anatinus	82.82	3.00e-180	624.00
IUUC-Ocu-073866	Oryctolagus cuniculus	98.92	0.00e+00	778.00
IUUC-Oba-075267	Oryza barthii	44.00	9.00e-15	74.30
IUUC-Ogl-077938	Oryza glaberrima	38.46	3.00e-15	75.50
IUUC-Ogu-078754	Oryza glumaepatula	44.00	8.00e-15	74.30
IUUC-Oin-080031	Oryza indica	38.46	2.00e-15	75.90
IUUC-Ome-081863	Oryza meridionalis	44.00	8.00e-15	74.30
IUUC-Oni-082943	Oryza nivara	44.00	1.00e-14	74.30
IUUC-Opu-083391	Oryza punctata	37.08	2.00e-15	76.30
IUUC-Oru-084675	Oryza rufipogon	44.00	1.00e-14	74.30
IUUC-Osa-085452	Oryza sativa	38.46	2.00e-15	75.90
IUUC-Oga-087997	Otolemur garnettii	99.13	0.00e+00	735.00
IUUC-Oar-090272	Ovis aries	98.05	0.00e+00	724.00
IUUC-Ptr-091566	Pan troglodytes	99.13	0.00e+00	734.00
IUUC-Pan-091884	Papio anubis	99.35	0.00e+00	736.00
IUUC-Psi-093539	Pelodiscus sinensis	96.99	0.00e+00	710.00
IUUC-Pab-098694	Pongo abelii	99.31	0.00e+00	697.00
IUUC-Pop-098962	Populus trichocarpa	41.49	9.00e-17	79.70
IUUC-Pva-103055	Pteropus vampyrus	98.64	0.00e+00	679.00
IUUC-Rno-105006	Rattus norvegicus	97.92	0.00e+00	717.00
IUUC-Sit-109831	Setaria italica	38.46	5.00e-16	78.20
IUUC-Sly-111171	Solanum lycopersicum	36.05	3.00e-13	68.20
IUUC-Stu-112327	Solanum tuberosum	47.95	1.00e-15	77.00
IUUC-Sar-112966	Sorex araneus	98.44	0.00e+00	718.00
IUUC-Sre-114942	Sporisorium reilianum	29.85	4.00e-12	66.60
IUUC-Ssc-115502	Sus scrofa	99.13	0.00e+00	726.00
IUUC-Tgu-117480	Taeniopygia guttata	91.99	0.00e+00	694.00
IUUC-Tsy-118844	Tarsius syrichta	94.36	0.00e+00	676.00
IUUC-Tca-121858	Theobroma cacao	41.11	1.00e-16	80.10
IUUC-Tae-123101	Triticum aestivum	38.46	5.00e-16	78.60
IUUC-Tur-126249	Triticum urartu	36.26	3.00e-15	75.10
IUUC-Ttr-129073	Tursiops truncatus	98.64	0.00e+00	678.00
IUUC-Uma-129479	Ustilago maydis	29.85	1.00e-11	65.50
IUUC-Vpa-130240	Vicugna pacos	98.46	1.00e-146	513.00
IUUC-Vvi-131462	Vitis vinifera	38.89	4.00e-17	81.60
IUUC-Xtr-131963	Xenopus tropicalis	93.71	0.00e+00	748.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence