iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114766

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G113700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g009270	Sb04g009270.1	Sb04g009270.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	43.46	3.00e-49	193.00	IUUC-Hsa-047000
E3 activity/RING/RING	83.01	7.00e-121	429.00	IUUC-Osa-086166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MADGGSGSGE PGAGGGSAPV CSFVRKPPKN MRKRPAAPAG SDDDDDGGGS GALAAARSKK 60
GPPSSAAGKL VFSTADASSE PRRFQYESSR TIQSTDSRAT AVLETETEFD RDSRAIREKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACG GCGGCAGCGG CAGCGGCGAG CCGGGGGCCG GCGGTGGATC GGCGCCGGTG 60
TGCAGTTTCG TGAGGAAACC ACCCAAGAAC ATGCGGAAGC GCCCCGCCGC GCCCGCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

sbi:SORBI_04g009270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	78.34	3.00e-127	447.00
IUUC-Aml-002002	Ailuropoda melanoleuca	43.27	1.00e-51	196.00
IUUC-Atr-003145	Amborella trichopoda	58.39	1.00e-87	315.00
IUUC-Apl-003440	Anas platyrhynchos	46.09	4.00e-51	194.00
IUUC-Aca-004421	Anolis carolinensis	38.99	2.00e-51	195.00
IUUC-Aly-006121	Arabidopsis lyrata	61.08	4.00e-101	360.00
IUUC-Ath-007493	Arabidopsis thaliana	61.49	2.00e-98	350.00
IUUC-Ago-007731	Ashbya gossypii	36.57	1.00e-25	108.00
IUUC-Acl-008186	Aspergillus clavatus	43.48	4.00e-37	147.00
IUUC-Afl-008484	Aspergillus flavus	41.45	2.00e-33	135.00
IUUC-Afu-008971	Aspergillus fumigatus	44.72	1.00e-37	149.00
IUUC-Ani-009499	Aspergillus nidulans	46.36	2.00e-37	149.00
IUUC-Ang-009717	Aspergillus niger	46.21	4.00e-39	154.00
IUUC-Aor-009898	Aspergillus oryzae	41.45	2.00e-33	135.00
IUUC-Ate-010508	Aspergillus terreus	40.44	1.00e-36	146.00
IUUC-Ame-011925	Astyanax mexicanus	45.23	2.00e-52	198.00
IUUC-Bgr-012259	Blumeria graminis	31.85	2.00e-34	139.00
IUUC-Bta-012958	Bos taurus	43.62	2.00e-50	191.00
IUUC-Bci-013882	Botrytis cinerea	45.03	2.00e-36	145.00
IUUC-Bdi-014084	Brachypodium distachyon	83.01	1.00e-128	451.00
IUUC-Bol-016607	Brassica oleracea	60.62	3.00e-99	354.00
IUUC-Bra-017747	Brassica rapa	60.62	2.00e-100	358.00
IUUC-Cel-018698	Caenorhabditis elegans	40.89	1.00e-41	162.00
IUUC-Cja-019434	Callithrix jacchus	44.49	1.00e-51	196.00
IUUC-Cfa-020902	Canis familiaris	43.27	1.00e-51	196.00
IUUC-Cre-022885	Chlamydomonas reinhardtii	51.35	3.00e-70	257.00
IUUC-Csa-023933	Chlorocebus sabaeus	42.23	2.00e-49	188.00
IUUC-Cho-024587	Choloepus hoffmanni	40.64	1.00e-31	129.00
IUUC-Cin-025328	Ciona intestinalis	42.80	1.00e-53	202.00
IUUC-Csv-026148	Ciona savignyi	45.60	4.00e-55	207.00
IUUC-Cgl-026700	Colletotrichum gloeosporioides	45.04	1.00e-31	129.00
IUUC-Cne-026816	Cryptococcus neoformans	51.03	3.00e-40	157.00
IUUC-Dre-027744	Danio rerio	45.64	3.00e-54	204.00
IUUC-Dse-031155	Dothistroma septosporum	45.14	2.00e-33	135.00
IUUC-Dme-031788	Drosophila melanogaster	48.03	1.00e-57	215.00
IUUC-Ete-033013	Echinops telfairi	43.64	1.00e-50	192.00
IUUC-Eca-033460	Equus caballus	43.27	1.00e-51	196.00
IUUC-Fca-035525	Felis catus	42.64	6.00e-52	196.00
IUUC-Fal-037206	Ficedula albicollis	45.15	3.00e-52	197.00
IUUC-Fox-037959	Fusarium oxysporum	42.67	4.00e-35	140.00
IUUC-Fso-038348	Fusarium solani	32.48	9.00e-36	143.00
IUUC-Gmo-038718	Gadus morhua	45.78	1.00e-53	202.00
IUUC-Ggr-040114	Gaeumannomyces graminis	43.40	5.00e-37	147.00
IUUC-Gga-041037	Gallus gallus	44.00	3.00e-53	201.00
IUUC-Gac-042103	Gasterosteus aculeatus	44.21	5.00e-53	200.00
IUUC-Gma-043581	Glycine max	62.19	9.00e-100	355.00
IUUC-Ggo-044906	Gorilla gorilla	44.30	3.00e-51	194.00
IUUC-Hsa-047000	Homo sapiens	44.30	3.00e-51	194.00
IUUC-Hvu-047578	Hordeum vulgare	87.29	2.00e-49	186.00
IUUC-Itr-048102	Ictidomys tridecemlineatus	42.38	1.00e-51	196.00
IUUC-Kpa-049320	Komagataella pastoris	38.24	1.00e-32	132.00
IUUC-Lch-050488	Latimeria chalumnae	45.08	2.00e-54	204.00
IUUC-Lpe-051156	Leersia perrieri	83.44	5.00e-115	406.00
IUUC-Loc-052670	Lepisosteus oculatus	44.07	8.00e-53	199.00
IUUC-Lma-053326	Leptosphaeria maculans	41.77	2.00e-36	145.00
IUUC-Laf-053570	Loxodonta africana	41.24	3.00e-52	197.00
IUUC-Mcc-055375	Macaca mulatta	44.30	4.00e-51	194.00
IUUC-Meu-056191	Macropus eugenii	45.57	6.00e-51	193.00
IUUC-Mor-057193	Magnaporthe oryzae	43.04	3.00e-36	144.00
IUUC-Mpo-057603	Magnaporthe poae	47.13	7.00e-38	150.00
IUUC-Mtr-058182	Medicago truncatula	61.56	1.00e-101	362.00
IUUC-Mla-058921	Melampsora laricipopulina	42.47	1.00e-30	124.00
IUUC-Mga-059281	Meleagris gallopavo	44.28	3.00e-53	201.00
IUUC-Mvi-060317	Microbotryum violaceum	44.72	8.00e-34	137.00
IUUC-Mmr-061744	Microcebus murinus	43.88	4.00e-51	194.00
IUUC-Mmu-064400	Mus musculus	43.27	4.00e-52	197.00
IUUC-Mac-065265	Musa acuminata	74.69	9.00e-91	325.00
IUUC-Mpu-066867	Mustela putorius furo	42.86	3.00e-51	194.00
IUUC-Mlu-067828	Myotis lucifugus	42.80	5.00e-52	197.00
IUUC-Nfi-068575	Neosartorya fischeri	42.86	4.00e-34	137.00
IUUC-Ncr-068828	Neurospora crassa	44.74	1.00e-33	136.00
IUUC-Nle-069137	Nomascus leucogenys	44.30	3.00e-51	194.00
IUUC-Ont-071497	Oreochromis niloticus	44.40	4.00e-52	197.00
IUUC-Oan-073182	Ornithorhynchus anatinus	42.86	4.00e-51	194.00
IUUC-Ocu-073949	Oryctolagus cuniculus	43.88	4.00e-51	194.00
IUUC-Oba-075693	Oryza barthii	82.75	4.00e-119	420.00
IUUC-Obr-076128	Oryza brachyantha	81.50	2.00e-112	398.00
IUUC-Ogl-077323	Oryza glaberrima	82.75	4.00e-119	420.00
IUUC-Ogu-078766	Oryza glumaepatula	82.75	4.00e-119	420.00
IUUC-Oin-080054	Oryza indica	82.75	4.00e-119	420.00
IUUC-Olo-080325	Oryza longistaminata	77.18	1.00e-88	318.00
IUUC-Ome-081331	Oryza meridionalis	81.90	3.00e-124	437.00
IUUC-Oni-082786	Oryza nivara	82.43	9.00e-120	422.00
IUUC-Opu-083855	Oryza punctata	82.64	3.00e-115	407.00
IUUC-Oru-084304	Oryza rufipogon	82.75	4.00e-119	420.00
IUUC-Osa-086166	Oryza sativa	82.43	3.00e-119	420.00
IUUC-Ola-086368	Oryzias latipes	43.20	9.00e-47	179.00
IUUC-Olu-087624	Ostreococcus lucimarinus	47.35	3.00e-56	210.00
IUUC-Oga-088080	Otolemur garnettii	43.25	1.00e-51	196.00
IUUC-Oar-089545	Ovis aries	43.85	8.00e-52	196.00
IUUC-Ptr-090827	Pan troglodytes	44.30	3.00e-51	194.00
IUUC-Pan-092245	Papio anubis	44.30	4.00e-51	194.00
IUUC-Psi-093790	Pelodiscus sinensis	45.64	1.00e-52	199.00
IUUC-Pma-094326	Petromyzon marinus	45.56	1.00e-54	206.00
IUUC-Pno-095057	Phaeosphaeria nodorum	44.03	4.00e-38	150.00
IUUC-Ppa-095690	Physcomitrella patens	63.74	1.00e-92	332.00
IUUC-Pfo-097026	Poecilia formosa	44.63	4.00e-53	200.00
IUUC-Pab-098689	Pongo abelii	44.30	3.00e-51	194.00
IUUC-Pca-100687	Procavia capensis	42.32	4.00e-49	187.00
IUUC-Ppe-101155	Prunus persica	69.81	2.00e-100	357.00
IUUC-Pgr-103440	Puccinia graminis	49.36	5.00e-41	160.00
IUUC-Ptt-103893	Puccinia triticina	62.96	3.00e-17	81.30
IUUC-Pte-104377	Pyrenophora teres	45.27	4.00e-39	154.00
IUUC-Pyt-104731	Pyrenophora triticirepentis	45.27	4.00e-39	154.00
IUUC-Rno-105967	Rattus norvegicus	42.86	1.00e-51	196.00
IUUC-Sce-106215	Saccharomyces cerevisiae	39.74	1.00e-31	129.00
IUUC-Sha-107587	Sarcophilus harrisii	44.44	4.00e-51	194.00
IUUC-Sja-107955	Schizosaccharomyces japonicus	43.96	2.00e-37	149.00
IUUC-Spo-108336	Schizosaccharomyces pombe	38.99	4.00e-33	135.00
IUUC-Smo-108930	Selaginella moellendorffii	58.04	4.00e-83	300.00
IUUC-Sit-110234	Setaria italica	85.24	9.00e-126	442.00
IUUC-Sly-111790	Solanum lycopersicum	75.14	1.00e-78	284.00
IUUC-Stu-111994	Solanum tuberosum	61.88	2.00e-103	367.00
IUUC-Sar-113374	Sorex araneus	42.86	3.00e-51	194.00
IUUC-Sre-115021	Sporisorium reilianum	48.62	5.00e-46	177.00
IUUC-Ssc-115474	Sus scrofa	43.67	1.00e-51	195.00
IUUC-Tgu-116649	Taeniopygia guttata	44.81	5.00e-52	197.00
IUUC-Tru-117701	Takifugu rubripes	44.08	5.00e-53	200.00
IUUC-Tni-120607	Tetraodon nigroviridis	43.98	6.00e-51	193.00
IUUC-Tca-121278	Theobroma cacao	62.15	3.00e-87	314.00
IUUC-Tre-122006	Trichoderma reesei	39.47	2.00e-29	122.00
IUUC-Tvi-122670	Trichoderma virens	40.67	1.00e-33	136.00
IUUC-Tae-122716	Triticum aestivum	78.34	1.00e-126	445.00
IUUC-Tur-126208	Triticum urartu	83.66	1.00e-115	408.00
IUUC-Tme-126908	Tuber melanosporum	43.27	3.00e-33	134.00
IUUC-Tbe-127394	Tupaia belangeri	44.30	3.00e-51	194.00
IUUC-Uma-129339	Ustilago maydis	43.55	2.00e-44	172.00
IUUC-Vda-129895	Verticillium dahliae	35.05	2.00e-39	155.00
IUUC-Vpa-130519	Vicugna pacos	44.73	3.00e-51	194.00
IUUC-Vvi-131382	Vitis vinifera	62.62	9.00e-97	345.00
IUUC-Xtr-131923	Xenopus tropicalis	43.63	8.00e-54	202.00
IUUC-Xma-133705	Xiphophorus maculatus	44.63	1.00e-53	202.00
IUUC-Yli-134518	Yarrowia lipolytica	49.26	4.00e-33	133.00
IUUC-Zma-135029	Zea mays	84.92	1.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence