iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__2331__AT4G19670.2	fgenesh2_kg.7__2331__AT4G19670.2	fgenesh2_kg.7__2331__AT4G19670.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	26.73	1.00e-14	79.30	IUUC-Hsa-046905

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MENQEDSCGC EELPLNHIGD EEEFRSCCGD EEVWLKESDD TVKVAEEEKK DELDDEFSVK 60
VFFKGVSISE RGDSGSGYSG IGVVLERSGD FELIQVQKKL DFYVEESVAN YLALMDGLEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCCATTCG AAGAGAGAGC AAAACCAGAA AAACGGATGA TTCTTTTTCT TCTTCTTCTC 60
TCCACAAAAC CAGTAGAAAC ATCCAAAACA ATGCAAAGAA AGTAAAGTTT ACTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR012337--RNaseH-like_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4

SMART

SM00647--IBR
SM00184--RING

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_492898

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000190	Aegilops tauschii	33.02	8.00e-28	117.00
IUUC-Aml-001424	Ailuropoda melanoleuca	33.33	7.00e-12	63.20
IUUC-Aca-004331	Anolis carolinensis	26.49	4.00e-13	68.20
IUUC-Ame-011391	Astyanax mexicanus	27.73	4.00e-17	82.40
IUUC-Bol-016072	Brassica oleracea	86.03	0.00e+00	834.00
IUUC-Bra-018037	Brassica rapa	84.71	0.00e+00	874.00
IUUC-Cja-019367	Callithrix jacchus	28.50	2.00e-15	75.90
IUUC-Cpo-022283	Cavia porcellus	34.41	6.00e-12	63.50
IUUC-Csa-023174	Chlorocebus sabaeus	28.50	2.00e-15	75.90
IUUC-Dre-028219	Danio rerio	27.62	2.00e-16	80.10
IUUC-Dno-029150	Dasypus novemcinctus	28.50	4.00e-15	74.30
IUUC-Eca-034129	Equus caballus	28.50	7.00e-15	73.60
IUUC-Fca-036093	Felis catus	33.33	1.00e-11	62.80
IUUC-Fal-037155	Ficedula albicollis	26.07	4.00e-15	75.10
IUUC-Gmo-039328	Gadus morhua	26.42	2.00e-13	68.90
IUUC-Gga-041198	Gallus gallus	26.51	2.00e-15	76.30
IUUC-Hsa-046905	Homo sapiens	28.04	3.00e-16	79.30
IUUC-Hvu-047484	Hordeum vulgare	37.79	3.00e-37	149.00
IUUC-Itr-048769	Ictidomys tridecemlineatus	33.33	2.00e-11	60.80
IUUC-Lch-049864	Latimeria chalumnae	33.33	1.00e-11	62.40
IUUC-Lpe-051649	Leersia perrieri	34.10	3.00e-26	113.00
IUUC-Loc-052491	Lepisosteus oculatus	27.91	2.00e-17	83.60
IUUC-Laf-054434	Loxodonta africana	28.65	4.00e-12	64.30
IUUC-Mcc-054775	Macaca mulatta	28.50	4.00e-16	79.00
IUUC-Mtr-057989	Medicago truncatula	34.84	2.00e-33	135.00
IUUC-Mmr-061731	Microcebus murinus	26.73	9.00e-16	77.80
IUUC-Mdo-062999	Monodelphis domestica	28.37	3.00e-18	86.30
IUUC-Mmu-063659	Mus musculus	28.50	1.00e-15	77.00
IUUC-Mac-065414	Musa acuminata	38.35	2.00e-32	132.00
IUUC-Mpu-066110	Mustela putorius furo	28.77	3.00e-14	71.60
IUUC-Nle-069289	Nomascus leucogenys	28.50	1.00e-15	76.30
IUUC-Opr-070800	Ochotona princeps	33.33	4.00e-12	63.90
IUUC-Ocu-074266	Oryctolagus cuniculus	28.04	8.00e-15	73.60
IUUC-Ogu-078368	Oryza glumaepatula	33.51	3.00e-25	109.00
IUUC-Opu-083215	Oryza punctata	34.20	7.00e-32	130.00
IUUC-Oga-088033	Otolemur garnettii	28.50	4.00e-15	74.70
IUUC-Oar-089295	Ovis aries	26.73	2.00e-15	76.60
IUUC-Pan-091768	Papio anubis	28.50	2.00e-15	75.90
IUUC-Psi-093567	Pelodiscus sinensis	25.53	6.00e-16	77.80
IUUC-Ppa-095998	Physcomitrella patens	32.56	1.00e-53	204.00
IUUC-Pfo-096655	Poecilia formosa	26.64	2.00e-16	80.10
IUUC-Pop-099816	Populus trichocarpa	38.11	6.00e-39	154.00
IUUC-Ppe-101728	Prunus persica	67.13	0.00e+00	645.00
IUUC-Rno-105176	Rattus norvegicus	28.97	1.00e-15	77.00
IUUC-Ssl-108396	Sclerotinia sclerotiorum	25.61	7.00e-16	78.60
IUUC-Sly-111393	Solanum lycopersicum	63.88	8.00e-175	606.00
IUUC-Stu-112736	Solanum tuberosum	36.57	8.00e-37	146.00
IUUC-Sar-113564	Sorex araneus	33.33	8.00e-12	63.20
IUUC-Sbi-114532	Sorghum bicolor	33.50	1.00e-30	125.00
IUUC-Tni-119677	Tetraodon nigroviridis	27.70	2.00e-14	72.00
IUUC-Tca-121059	Theobroma cacao	34.93	4.00e-39	154.00
IUUC-Tae-124420	Triticum aestivum	36.87	7.00e-36	144.00
IUUC-Tur-126368	Triticum urartu	35.21	1.00e-35	143.00
IUUC-Tme-127083	Tuber melanosporum	27.68	4.00e-18	85.10
IUUC-Tbe-127306	Tupaia belangeri	26.27	2.00e-12	65.50
IUUC-Vvi-130951	Vitis vinifera	39.35	2.00e-33	135.00
IUUC-Xtr-132796	Xenopus tropicalis	27.49	5.00e-17	81.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence