iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000013930.7	ENSRNOT00000077799.1	ENSRNOP00000074121.1
ENSRNOG00000013930.7	ENSRNOT00000019555.6	ENSRNOP00000019555.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	35.8	138	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 138  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 183
           ********55553322255788*********9......4559*********8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSTRNPQRKR RGGAVNSRQT QKRTRETTST PEISLEAEPI ELVETVGDEI VDLTCESLEP 60
VVVDLTHNDS VVVSIGEKRR RPRRNGRRLR QDHADSCVVS SDDEELSKDK DVYVTTHTPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGCGGGCC TTATCTAAGC TGCGAGAGAG CCGAGGACGC TTGCGGGCCT TGGAACTGAA 60
TGGGGTTTGG GCTTCCAGAA GCCGCTTTCG GCCCCCTATG GTTAGTAAGG CGTGCGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	2.00e-10	59.70
IUUC-Aml-002206	Ailuropoda melanoleuca	87.24	2.00e-82	297.00
IUUC-Atr-002771	Amborella trichopoda	33.33	2.00e-09	55.80
IUUC-Apl-004120	Anas platyrhynchos	68.56	7.00e-68	249.00
IUUC-Aca-004236	Anolis carolinensis	61.78	2.00e-58	218.00
IUUC-Ame-011555	Astyanax mexicanus	51.33	5.00e-35	140.00
IUUC-Bta-012913	Bos taurus	85.19	2.00e-82	297.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	2.00e-10	59.70
IUUC-Bol-016418	Brassica oleracea	37.70	5.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	1.00e-07	50.10
IUUC-Cel-018585	Caenorhabditis elegans	32.00	3.00e-08	51.60
IUUC-Cja-019151	Callithrix jacchus	88.36	5.00e-84	303.00
IUUC-Cfa-020868	Canis familiaris	88.02	5.00e-82	296.00
IUUC-Cpo-022249	Cavia porcellus	83.16	3.00e-74	270.00
IUUC-Csa-024125	Chlorocebus sabaeus	91.53	2.00e-83	301.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.70
IUUC-Csv-026318	Ciona savignyi	40.98	6.00e-13	67.00
IUUC-Dre-028145	Danio rerio	43.83	2.00e-31	128.00
IUUC-Dno-029605	Dasypus novemcinctus	85.19	2.00e-84	304.00
IUUC-Dor-030898	Dipodomys ordii	88.36	3.00e-85	307.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	1.00e-10	60.50
IUUC-Ete-032694	Echinops telfairi	83.07	4.00e-71	260.00
IUUC-Eca-033443	Equus caballus	88.89	2.00e-80	291.00
IUUC-Eeu-034603	Erinaceus europaeus	89.32	2.00e-53	200.00
IUUC-Fca-035507	Felis catus	87.30	4.00e-78	283.00
IUUC-Fal-037382	Ficedula albicollis	65.98	3.00e-61	227.00
IUUC-Gmo-038960	Gadus morhua	71.43	7.00e-19	85.50
IUUC-Gga-040493	Gallus gallus	64.92	1.00e-65	241.00
IUUC-Gac-042194	Gasterosteus aculeatus	48.32	2.00e-33	135.00
IUUC-Ggo-044726	Gorilla gorilla	91.01	1.00e-82	298.00
IUUC-Hsa-046212	Homo sapiens	91.01	1.00e-82	298.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	89.53	5.00e-81	293.00
IUUC-Lpe-050920	Leersia perrieri	37.70	3.00e-10	58.50
IUUC-Loc-051907	Lepisosteus oculatus	44.05	4.00e-33	134.00
IUUC-Laf-054145	Loxodonta africana	81.63	4.00e-76	276.00
IUUC-Mcc-055689	Macaca mulatta	92.06	2.00e-83	301.00
IUUC-Meu-056654	Macropus eugenii	84.38	2.00e-31	128.00
IUUC-Mtr-058314	Medicago truncatula	45.45	2.00e-10	58.50
IUUC-Mga-059303	Meleagris gallopavo	66.84	2.00e-66	244.00
IUUC-Mmr-061355	Microcebus murinus	91.01	6.00e-82	296.00
IUUC-Mdo-062968	Monodelphis domestica	65.62	1.00e-64	238.00
IUUC-Mmu-064421	Mus musculus	94.39	1.00e-96	345.00
IUUC-Mac-064573	Musa acuminata	31.68	7.00e-12	64.30
IUUC-Mpu-066522	Mustela putorius furo	87.96	3.00e-81	293.00
IUUC-Mlu-067065	Myotis lucifugus	82.81	1.00e-76	278.00
IUUC-Nle-069198	Nomascus leucogenys	92.06	8.00e-84	302.00
IUUC-Opr-071141	Ochotona princeps	82.01	3.00e-85	307.00
IUUC-Oan-073341	Ornithorhynchus anatinus	63.89	1.00e-35	142.00
IUUC-Ocu-073787	Oryctolagus cuniculus	86.22	3.00e-89	320.00
IUUC-Oba-075460	Oryza barthii	40.32	5.00e-11	61.20
IUUC-Obr-076349	Oryza brachyantha	37.70	9.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	35.44	3.00e-11	62.00
IUUC-Ogu-078677	Oryza glumaepatula	40.32	4.00e-11	61.60
IUUC-Oin-079992	Oryza indica	35.44	3.00e-11	62.00
IUUC-Olo-080257	Oryza longistaminata	41.94	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	35.44	3.00e-11	62.80
IUUC-Oni-082671	Oryza nivara	40.32	5.00e-11	61.20
IUUC-Opu-083644	Oryza punctata	40.32	7.00e-11	60.80
IUUC-Oru-084650	Oryza rufipogon	40.32	5.00e-11	61.20
IUUC-Osa-086110	Oryza sativa	35.44	3.00e-11	62.00
IUUC-Ola-086970	Oryzias latipes	40.51	3.00e-32	131.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	2.00e-10	58.50
IUUC-Oga-088242	Otolemur garnettii	90.53	2.00e-90	324.00
IUUC-Oar-089469	Ovis aries	86.46	8.00e-89	319.00
IUUC-Ptr-091254	Pan troglodytes	86.24	2.00e-76	278.00
IUUC-Pan-092919	Papio anubis	92.11	5.00e-84	303.00
IUUC-Psi-093929	Pelodiscus sinensis	67.69	2.00e-65	241.00
IUUC-Pma-094118	Petromyzon marinus	45.98	2.00e-20	90.10
IUUC-Ppa-095567	Physcomitrella patens	44.26	3.00e-11	62.00
IUUC-Pfo-097412	Poecilia formosa	44.24	1.00e-32	132.00
IUUC-Pab-098424	Pongo abelii	90.48	3.00e-82	297.00
IUUC-Pop-099483	Populus trichocarpa	37.10	5.00e-09	54.30
IUUC-Pca-100463	Procavia capensis	80.00	4.00e-46	176.00
IUUC-Pva-102594	Pteropus vampyrus	82.14	2.00e-56	211.00
IUUC-Sha-107487	Sarcophilus harrisii	67.18	8.00e-66	242.00
IUUC-Sit-109959	Setaria italica	36.07	4.00e-05	42.40
IUUC-Stu-112694	Solanum tuberosum	39.06	4.00e-09	54.70
IUUC-Sar-113601	Sorex araneus	85.19	1.00e-76	278.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	9.00e-05	40.40
IUUC-Ssc-115911	Sus scrofa	88.89	3.00e-80	290.00
IUUC-Tgu-117264	Taeniopygia guttata	68.23	1.00e-62	231.00
IUUC-Tru-117663	Takifugu rubripes	48.52	6.00e-35	139.00
IUUC-Tsy-118883	Tarsius syrichta	84.67	3.00e-65	240.00
IUUC-Tae-124872	Triticum aestivum	39.34	1.00e-10	60.10
IUUC-Tur-126408	Triticum urartu	39.34	1.00e-10	60.10
IUUC-Ttr-128950	Tursiops truncatus	64.02	2.00e-62	231.00
IUUC-Vvi-130833	Vitis vinifera	40.32	4.00e-10	58.20
IUUC-Xtr-132879	Xenopus tropicalis	57.42	2.00e-37	148.00
IUUC-Xma-133319	Xiphophorus maculatus	45.33	8.00e-30	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence