iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	54.39	3.00e-12	71.20	IUUC-Dme-032154
E3 activity/RING/RING	43.10	3.00e-09	62.00	IUUC-Hsa-046831

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR 60
RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT IERRNRESEL IALAGLQTVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCCATTGC ACCTTCTCTC TTTGAAAAAA ATCCAATCTT TTTCTACTTT CATTAATAAA 60
TCACCGATTA TTTTGTTTTC TCTTCTTCTT CTGCGATCCT TCATTGAATT TGATAGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009966--P:regulation of signal transduction

KEGG

ath:AT5G04460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000777	Aegilops tauschii	57.95	6.00e-91	328.00
IUUC-Aml-002324	Ailuropoda melanoleuca	47.17	2.00e-10	59.70
IUUC-Atr-002944	Amborella trichopoda	47.10	3.00e-159	555.00
IUUC-Apl-003920	Anas platyrhynchos	43.40	1.00e-09	57.40
IUUC-Aca-005343	Anolis carolinensis	43.40	7.00e-10	58.20
IUUC-Aly-006153	Arabidopsis lyrata	94.44	0.00e+00	1486.00
IUUC-Ame-010891	Astyanax mexicanus	38.78	7.00e-08	51.60
IUUC-Bta-013255	Bos taurus	47.06	1.00e-02	34.30
IUUC-Bdi-014456	Brachypodium distachyon	32.17	2.00e-22	100.00
IUUC-Bol-016275	Brassica oleracea	73.24	0.00e+00	959.00
IUUC-Bra-017715	Brassica rapa	74.55	0.00e+00	960.00
IUUC-Cja-019314	Callithrix jacchus	43.10	4.00e-11	62.40
IUUC-Cfa-021151	Canis familiaris	47.17	8.00e-11	61.20
IUUC-Cpo-022395	Cavia porcellus	47.17	8.00e-11	61.20
IUUC-Csa-024268	Chlorocebus sabaeus	43.10	3.00e-11	62.80
IUUC-Dno-029754	Dasypus novemcinctus	47.17	1.00e-10	60.80
IUUC-Dor-030366	Dipodomys ordii	47.17	1.00e-10	60.80
IUUC-Dme-032154	Drosophila melanogaster	56.60	2.00e-13	70.50
IUUC-Eca-033994	Equus caballus	35.29	8.00e-08	50.80
IUUC-Fca-035976	Felis catus	47.17	2.00e-10	60.10
IUUC-Fal-036894	Ficedula albicollis	43.40	1.00e-09	57.40
IUUC-Gmo-038673	Gadus morhua	47.17	1.00e-09	57.40
IUUC-Gga-041040	Gallus gallus	45.28	2.00e-10	59.70
IUUC-Gac-042143	Gasterosteus aculeatus	45.28	7.00e-10	58.20
IUUC-Gma-043468	Glycine max	42.34	2.00e-27	117.00
IUUC-Ggo-045648	Gorilla gorilla	43.10	4.00e-11	62.40
IUUC-Hsa-046831	Homo sapiens	43.10	3.00e-11	62.80
IUUC-Hvu-047768	Hordeum vulgare	42.18	7.00e-102	363.00
IUUC-Lch-049591	Latimeria chalumnae	43.40	4.00e-10	58.90
IUUC-Laf-054262	Loxodonta africana	47.17	1.00e-10	60.80
IUUC-Mcc-055333	Macaca mulatta	43.10	3.00e-11	62.80
IUUC-Meu-056023	Macropus eugenii	41.51	4.00e-09	55.80
IUUC-Mtr-058048	Medicago truncatula	62.74	0.00e+00	751.00
IUUC-Mga-059732	Meleagris gallopavo	43.40	2.00e-09	57.00
IUUC-Mmr-061792	Microcebus murinus	35.82	9.00e-08	50.40
IUUC-Mac-064492	Musa acuminata	48.84	3.00e-148	518.00
IUUC-Mpu-066450	Mustela putorius furo	47.17	1.00e-10	61.20
IUUC-Nle-069149	Nomascus leucogenys	43.10	1.00e-10	60.10
IUUC-Opr-070822	Ochotona princeps	47.17	5.00e-11	62.00
IUUC-Ont-072255	Oreochromis niloticus	47.17	2.00e-10	59.70
IUUC-Oan-073429	Ornithorhynchus anatinus	39.22	3.00e-08	52.80
IUUC-Ocu-074215	Oryctolagus cuniculus	47.06	8.00e-10	58.20
IUUC-Oba-075400	Oryza barthii	33.09	6.00e-22	98.20
IUUC-Obr-076257	Oryza brachyantha	34.29	4.00e-23	102.00
IUUC-Ogl-077249	Oryza glaberrima	33.09	4.00e-22	99.40
IUUC-Ogu-078361	Oryza glumaepatula	40.95	2.00e-94	339.00
IUUC-Oin-080213	Oryza indica	27.54	3.00e-22	99.40
IUUC-Ome-081372	Oryza meridionalis	52.19	2.00e-53	202.00
IUUC-Oni-082539	Oryza nivara	27.54	3.00e-22	99.80
IUUC-Opu-083730	Oryza punctata	41.39	9.00e-95	340.00
IUUC-Osa-085344	Oryza sativa	27.54	1.00e-22	101.00
IUUC-Oga-088419	Otolemur garnettii	47.17	1.00e-10	60.80
IUUC-Ptr-091650	Pan troglodytes	43.10	3.00e-11	62.80
IUUC-Pan-092859	Papio anubis	43.10	6.00e-11	61.20
IUUC-Psi-092984	Pelodiscus sinensis	43.40	2.00e-09	56.60
IUUC-Ppa-095704	Physcomitrella patens	60.94	3.00e-48	186.00
IUUC-Pab-097779	Pongo abelii	43.10	4.00e-11	62.40
IUUC-Pop-099791	Populus trichocarpa	63.79	0.00e+00	805.00
IUUC-Pca-100160	Procavia capensis	39.22	3.00e-08	53.10
IUUC-Ppe-102105	Prunus persica	64.93	0.00e+00	819.00
IUUC-Pva-102531	Pteropus vampyrus	47.17	1.00e-10	60.80
IUUC-Rno-105206	Rattus norvegicus	47.17	2.00e-10	60.50
IUUC-Sha-107468	Sarcophilus harrisii	41.51	5.00e-09	55.50
IUUC-Smo-108729	Selaginella moellendorffii	46.77	3.00e-56	212.00
IUUC-Sit-110065	Setaria italica	35.25	2.00e-23	103.00
IUUC-Sly-111868	Solanum lycopersicum	63.36	0.00e+00	771.00
IUUC-Stu-112627	Solanum tuberosum	63.50	0.00e+00	753.00
IUUC-Sbi-114634	Sorghum bicolor	43.20	1.00e-104	373.00
IUUC-Ssc-116401	Sus scrofa	34.33	2.00e-07	49.70
IUUC-Tgu-116692	Taeniopygia guttata	43.40	2.00e-09	57.00
IUUC-Tsy-118850	Tarsius syrichta	34.33	5.00e-08	50.80
IUUC-Tca-121136	Theobroma cacao	66.14	0.00e+00	842.00
IUUC-Tae-124586	Triticum aestivum	48.21	3.00e-52	198.00
IUUC-Tur-126820	Triticum urartu	64.96	2.00e-44	169.00
IUUC-Tbe-127614	Tupaia belangeri	34.09	9.00e-09	54.70
IUUC-Ttr-128919	Tursiops truncatus	47.06	1.00e-02	34.30
IUUC-Vpa-130273	Vicugna pacos	47.17	4.00e-10	59.30
IUUC-Vvi-131271	Vitis vinifera	63.68	0.00e+00	800.00
IUUC-Xtr-132312	Xenopus tropicalis	47.17	2.00e-10	60.10
IUUC-Xma-134204	Xiphophorus maculatus	47.17	3.00e-11	62.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence