iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000015575.1	ENSORLT00000019506.1	ENSORLP00000019505.1
ENSORLG00000015575.1	ENSORLT00000019508.1	ENSORLP00000019507.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-17	60.7	541	574

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gHtd+ ++la  ++ + ++++++D ++ +WD ++
   Q: 541  GHTDELWGLAVhPCkPQFLTCGYDRQVCLWDSSS 574
           8*********998889***************766 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MEDGFSSYSS LYDTSSLLQF CNDDSASATS SMEVTDRIAS LEQRVQMQED EIQLLKSALA 60
DVVRRLNLSE EQQALGSRRG PTKARPMIAT LPLRPTVNNG TILPKKGGGT LPSPSGPGSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTATGTTTG TTCGGAGAGG TTAAAAACAA GAGCAGCCGG AGTTCACGCG ACACAGTCGG 60
AGTTTAATGG GTTACCATGG TGACTCAGCC AGGGAGTCTG AGCCGCGCGA GGTGAATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036368--P:cone photoresponse recovery

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002077	Ailuropoda melanoleuca	71.38	0.00e+00	1221.00
IUUC-Apl-004179	Anas platyrhynchos	75.75	0.00e+00	1234.00
IUUC-Aca-004993	Anolis carolinensis	71.68	0.00e+00	1179.00
IUUC-Ame-011332	Astyanax mexicanus	81.30	0.00e+00	1351.00
IUUC-Bta-013419	Bos taurus	63.19	0.00e+00	1006.00
IUUC-Cel-018623	Caenorhabditis elegans	29.17	4.00e-84	306.00
IUUC-Cja-018976	Callithrix jacchus	73.83	0.00e+00	1230.00
IUUC-Cfa-021276	Canis familiaris	73.75	0.00e+00	1226.00
IUUC-Csa-023355	Chlorocebus sabaeus	73.42	0.00e+00	1214.00
IUUC-Cin-025784	Ciona intestinalis	54.84	0.00e+00	746.00
IUUC-Csv-026305	Ciona savignyi	49.68	0.00e+00	776.00
IUUC-Dre-028728	Danio rerio	84.14	0.00e+00	1375.00
IUUC-Dno-029055	Dasypus novemcinctus	72.30	0.00e+00	1245.00
IUUC-Dor-030628	Dipodomys ordii	74.04	0.00e+00	1213.00
IUUC-Dme-032093	Drosophila melanogaster	38.54	2.00e-116	413.00
IUUC-Eca-034266	Equus caballus	75.16	0.00e+00	1289.00
IUUC-Eeu-035302	Erinaceus europaeus	61.85	1.00e-143	503.00
IUUC-Fca-035446	Felis catus	74.84	0.00e+00	1214.00
IUUC-Fal-036734	Ficedula albicollis	73.62	0.00e+00	1241.00
IUUC-Gmo-038689	Gadus morhua	84.09	0.00e+00	1412.00
IUUC-Gga-040934	Gallus gallus	76.16	0.00e+00	962.00
IUUC-Gac-042476	Gasterosteus aculeatus	89.59	0.00e+00	1493.00
IUUC-Ggo-044828	Gorilla gorilla	73.68	0.00e+00	1256.00
IUUC-Hsa-045664	Homo sapiens	74.28	0.00e+00	1271.00
IUUC-Itr-048788	Ictidomys tridecemlineatus	58.41	0.00e+00	954.00
IUUC-Lch-050508	Latimeria chalumnae	75.62	0.00e+00	1271.00
IUUC-Loc-052823	Lepisosteus oculatus	75.57	0.00e+00	1281.00
IUUC-Laf-054164	Loxodonta africana	70.91	0.00e+00	1148.00
IUUC-Mcc-055810	Macaca mulatta	70.91	0.00e+00	1202.00
IUUC-Mga-059405	Meleagris gallopavo	73.33	0.00e+00	1221.00
IUUC-Mmr-061144	Microcebus murinus	73.61	0.00e+00	1219.00
IUUC-Mdo-062834	Monodelphis domestica	72.40	0.00e+00	1241.00
IUUC-Mmu-063955	Mus musculus	75.06	0.00e+00	1233.00
IUUC-Mpu-066240	Mustela putorius furo	74.71	0.00e+00	1201.00
IUUC-Mlu-067847	Myotis lucifugus	73.68	0.00e+00	895.00
IUUC-Nle-069783	Nomascus leucogenys	73.37	0.00e+00	1241.00
IUUC-Opr-070409	Ochotona princeps	67.95	0.00e+00	1127.00
IUUC-Ont-072468	Oreochromis niloticus	90.90	0.00e+00	1505.00
IUUC-Oan-073315	Ornithorhynchus anatinus	73.82	0.00e+00	1207.00
IUUC-Ocu-074604	Oryctolagus cuniculus	73.20	0.00e+00	1001.00
IUUC-Oga-089105	Otolemur garnettii	73.78	0.00e+00	1238.00
IUUC-Oar-090057	Ovis aries	75.22	0.00e+00	1261.00
IUUC-Ptr-091138	Pan troglodytes	74.52	0.00e+00	1275.00
IUUC-Pan-092691	Papio anubis	67.44	0.00e+00	1107.00
IUUC-Psi-093076	Pelodiscus sinensis	72.68	0.00e+00	1225.00
IUUC-Pma-094555	Petromyzon marinus	55.61	0.00e+00	797.00
IUUC-Pfo-096794	Poecilia formosa	88.59	0.00e+00	1410.00
IUUC-Pab-097787	Pongo abelii	71.84	0.00e+00	1228.00
IUUC-Pva-102676	Pteropus vampyrus	73.03	0.00e+00	1197.00
IUUC-Rno-105971	Rattus norvegicus	65.84	0.00e+00	1035.00
IUUC-Sha-107530	Sarcophilus harrisii	74.97	0.00e+00	1226.00
IUUC-Tgu-117046	Taeniopygia guttata	75.63	0.00e+00	1217.00
IUUC-Tru-118596	Takifugu rubripes	85.84	0.00e+00	1432.00
IUUC-Tsy-119142	Tarsius syrichta	71.29	0.00e+00	885.00
IUUC-Tni-120377	Tetraodon nigroviridis	88.10	0.00e+00	1451.00
IUUC-Tbe-127916	Tupaia belangeri	64.75	0.00e+00	804.00
IUUC-Ttr-129042	Tursiops truncatus	73.71	0.00e+00	1259.00
IUUC-Xtr-132117	Xenopus tropicalis	72.40	0.00e+00	1221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence