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Tag Content
iUUCD ID IUUC-Lch-050491
Ensembl Protein ID ENSLACP00000017165.1
UniProt Accession H3B5J4; H3B5J4_LATCH
Genbank Protein ID ENSLACP00000017165
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01089717
Gene Name AMFR
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000015123.1 ENSLACT00000017291.1 ENSLACP00000017165.1
ENSLACG00000015123.1 ENSLACT00000017292.1 ENSLACP00000017166.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.10e-08 35.6 339 377
UBD/Alpha-Helix/CUE 9.40e-11 41.7 454 495
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+++++   + lpCgH+fh +Cl  w        +  +CP+Cr
   Q: 339  CAICWDSMQS-ARKLPCGHLFHNSCLRSW------LEQDTSCPTCR 377
           ********99.9*****************......9*********8 PP
   

   UBD/Alpha-Helix/CUE
   S: 1    dletaleqLkeiFPnldysviqvvLeantgsleaavnnLLegs 43
           +l+ +++q++e+FP+ +y +i ++L ++t s+e +++nLLeg 
   Q: 454  QLNAMAHQIQEMFPQIPYHLILQDL-QLTHSVEITTDNLLEGR 495
           5889*********************.***************95 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MPLLFLERFP WPSLRAYTGL SAALLAASLS SAYRSLRVAP GPLGDPEHKE GDPESVGENP 60
PLGGTAAVAA MARYLVSDSL CVWVMVNTAC CFLMLIAKLI QCVVFGPLRV SERQHLKDKF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050491|E3,RING;UBD,CUE|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCTCCATTTA AAGACCATTG CCATTACCAA CATGGCGTCC ATCCACCACC AATAGACGGC 60
GCCGAGCCGT GGCTATTGCT GCGGAGCGAA GTTAAAAATA GAGAAGAAAC TGACACTAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050491|E3,RING;UBD,CUE|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51140--CUE
PS50089--ZF_RING_2
Pfam

PF02845--CUE
PF13639--zf-RING_2
SMART

SM00546--CUE
SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG lcm:102364204
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001300 Ailuropoda melanoleuca 75.97 0.00e+00 844.00
IUUC-Atr-003008 Amborella trichopoda 28.14 1.00e-29 124.00
IUUC-Apl-003404 Anas platyrhynchos 80.69 0.00e+00 847.00
IUUC-Aca-004559 Anolis carolinensis 80.94 0.00e+00 785.00
IUUC-Aly-006352 Arabidopsis lyrata 29.47 5.00e-31 129.00
IUUC-Ath-006702 Arabidopsis thaliana 32.51 1.00e-35 144.00
IUUC-Ame-011640 Astyanax mexicanus 72.71 0.00e+00 839.00
IUUC-Bta-012980 Bos taurus 74.92 0.00e+00 879.00
IUUC-Bdi-015070 Brachypodium distachyon 28.40 6.00e-37 148.00
IUUC-Bol-015593 Brassica oleracea 32.06 2.00e-34 139.00
IUUC-Bra-017516 Brassica rapa 32.40 8.00e-35 141.00
IUUC-Cel-018598 Caenorhabditis elegans 26.41 7.00e-36 145.00
IUUC-Cja-019577 Callithrix jacchus 76.19 0.00e+00 905.00
IUUC-Cfa-020793 Canis familiaris 81.08 0.00e+00 845.00
IUUC-Cpo-022387 Cavia porcellus 73.97 0.00e+00 902.00
IUUC-Cre-022743 Chlamydomonas reinhardtii 26.63 1.00e-25 110.00
IUUC-Csa-023168 Chlorocebus sabaeus 75.45 0.00e+00 907.00
IUUC-Cho-024433 Choloepus hoffmanni 78.54 0.00e+00 692.00
IUUC-Cin-025215 Ciona intestinalis 46.70 1.00e-145 510.00
IUUC-Csv-026133 Ciona savignyi 47.80 7.00e-134 470.00
IUUC-Cne-027002 Cryptococcus neoformans 26.15 6.00e-28 119.00
IUUC-Cme-027285 Cyanidioschyzon merolae 29.58 1.00e-23 104.00
IUUC-Dre-027594 Danio rerio 71.21 0.00e+00 765.00
IUUC-Dno-029407 Dasypus novemcinctus 77.21 0.00e+00 820.00
IUUC-Dor-030961 Dipodomys ordii 80.15 0.00e+00 842.00
IUUC-Ete-032962 Echinops telfairi 73.80 0.00e+00 704.00
IUUC-Eca-033683 Equus caballus 73.31 0.00e+00 851.00
IUUC-Eeu-034515 Erinaceus europaeus 84.44 1.00e-66 247.00
IUUC-Fca-035398 Felis catus 80.62 0.00e+00 828.00
IUUC-Fal-036758 Ficedula albicollis 74.07 0.00e+00 783.00
IUUC-Gmo-039014 Gadus morhua 69.69 0.00e+00 751.00
IUUC-Gga-040575 Gallus gallus 76.45 0.00e+00 889.00
IUUC-Gac-041414 Gasterosteus aculeatus 69.38 0.00e+00 740.00
IUUC-Gma-044123 Glycine max 28.39 7.00e-33 135.00
IUUC-Hsa-046272 Homo sapiens 76.03 0.00e+00 904.00
IUUC-Hvu-047279 Hordeum vulgare 28.70 2.00e-36 146.00
IUUC-Itr-047956 Ictidomys tridecemlineatus 80.31 0.00e+00 845.00
IUUC-Loc-052758 Lepisosteus oculatus 75.21 0.00e+00 829.00
IUUC-Laf-053452 Loxodonta africana 76.53 0.00e+00 853.00
IUUC-Mcc-055820 Macaca mulatta 80.98 0.00e+00 834.00
IUUC-Meu-056726 Macropus eugenii 73.92 0.00e+00 736.00
IUUC-Mtr-058639 Medicago truncatula 27.41 3.00e-33 136.00
IUUC-Mla-059168 Melampsora laricipopulina 26.43 3.00e-28 120.00
IUUC-Mga-059937 Meleagris gallopavo 79.47 0.00e+00 838.00
IUUC-Mvi-060515 Microbotryum violaceum 28.65 4.00e-26 113.00
IUUC-Mmr-060730 Microcebus murinus 75.62 0.00e+00 885.00
IUUC-Mdo-062771 Monodelphis domestica 75.16 0.00e+00 898.00
IUUC-Mmu-064219 Mus musculus 76.23 0.00e+00 907.00
IUUC-Mac-065495 Musa acuminata 28.57 2.00e-29 123.00
IUUC-Mpu-066796 Mustela putorius furo 81.05 0.00e+00 833.00
IUUC-Mlu-068189 Myotis lucifugus 79.81 0.00e+00 828.00
IUUC-Nle-069239 Nomascus leucogenys 77.02 0.00e+00 878.00
IUUC-Opr-070702 Ochotona princeps 64.73 3.00e-101 362.00
IUUC-Ont-072033 Oreochromis niloticus 72.25 0.00e+00 795.00
IUUC-Oan-073717 Ornithorhynchus anatinus 77.86 0.00e+00 789.00
IUUC-Ocu-074145 Oryctolagus cuniculus 76.24 0.00e+00 897.00
IUUC-Oba-075221 Oryza barthii 27.75 7.00e-35 141.00
IUUC-Obr-076914 Oryza brachyantha 29.24 1.00e-36 147.00
IUUC-Ogl-077929 Oryza glaberrima 51.16 3.00e-11 61.20
IUUC-Ogu-078124 Oryza glumaepatula 27.75 7.00e-35 141.00
IUUC-Oin-080013 Oryza indica 28.03 2.00e-34 140.00
IUUC-Olo-080247 Oryza longistaminata 28.61 9.00e-33 134.00
IUUC-Ome-081769 Oryza meridionalis 28.32 2.00e-36 146.00
IUUC-Oni-082946 Oryza nivara 27.75 6.00e-35 141.00
IUUC-Opu-083268 Oryza punctata 27.06 3.00e-24 106.00
IUUC-Oru-085114 Oryza rufipogon 27.75 7.00e-35 141.00
IUUC-Osa-085829 Oryza sativa 28.76 5.00e-35 142.00
IUUC-Ola-087152 Oryzias latipes 69.75 0.00e+00 761.00
IUUC-Olu-087894 Ostreococcus lucimarinus 25.48 1.00e-25 110.00
IUUC-Oga-088486 Otolemur garnettii 80.38 0.00e+00 843.00
IUUC-Oar-089310 Ovis aries 80.76 0.00e+00 853.00
IUUC-Ptr-090649 Pan troglodytes 80.96 0.00e+00 853.00
IUUC-Pan-091692 Papio anubis 71.57 0.00e+00 841.00
IUUC-Psi-093064 Pelodiscus sinensis 87.94 0.00e+00 717.00
IUUC-Pma-094763 Petromyzon marinus 78.28 2.00e-97 347.00
IUUC-Ppa-095969 Physcomitrella patens 31.02 3.00e-39 156.00
IUUC-Pfo-096810 Poecilia formosa 71.12 0.00e+00 780.00
IUUC-Pab-097859 Pongo abelii 80.98 0.00e+00 835.00
IUUC-Pop-099346 Populus trichocarpa 28.32 7.00e-31 128.00
IUUC-Pca-100344 Procavia capensis 75.00 0.00e+00 867.00
IUUC-Ppe-102033 Prunus persica 29.54 9.00e-31 128.00
IUUC-Pva-103114 Pteropus vampyrus 52.30 1.00e-149 523.00
IUUC-Pgr-103286 Puccinia graminis 25.36 2.00e-23 104.00
IUUC-Ptt-103919 Puccinia triticina 25.36 2.00e-21 96.70
IUUC-Rno-105880 Rattus norvegicus 74.32 0.00e+00 856.00
IUUC-Sha-107015 Sarcophilus harrisii 82.31 0.00e+00 867.00
IUUC-Spo-108308 Schizosaccharomyces pombe 22.82 3.00e-21 97.10
IUUC-Smo-109664 Selaginella moellendorffii 31.56 6.00e-35 141.00
IUUC-Sit-110276 Setaria italica 29.08 1.00e-35 144.00
IUUC-Sly-111819 Solanum lycopersicum 29.51 8.00e-35 141.00
IUUC-Stu-112048 Solanum tuberosum 25.57 4.00e-30 125.00
IUUC-Sar-113397 Sorex araneus 87.33 0.00e+00 677.00
IUUC-Sbi-114192 Sorghum bicolor 29.39 2.00e-38 153.00
IUUC-Sre-115212 Sporisorium reilianum 26.62 2.00e-23 103.00
IUUC-Ssc-115988 Sus scrofa 68.25 3.00e-96 344.00
IUUC-Tgu-116717 Taeniopygia guttata 81.65 0.00e+00 843.00
IUUC-Tru-117805 Takifugu rubripes 66.52 0.00e+00 794.00
IUUC-Tsy-119442 Tarsius syrichta 74.62 0.00e+00 749.00
IUUC-Tni-119777 Tetraodon nigroviridis 72.15 2.00e-173 601.00
IUUC-Tca-121783 Theobroma cacao 28.53 1.00e-29 124.00
IUUC-Tae-125239 Triticum aestivum 29.60 3.00e-38 152.00
IUUC-Tur-126538 Triticum urartu 26.41 2.00e-26 114.00
IUUC-Tme-127197 Tuber melanosporum 26.42 5.00e-22 99.80
IUUC-Tbe-127322 Tupaia belangeri 58.13 7.00e-93 334.00
IUUC-Ttr-128181 Tursiops truncatus 80.19 0.00e+00 846.00
IUUC-Vpa-130483 Vicugna pacos 75.71 4.00e-167 580.00
IUUC-Vvi-130989 Vitis vinifera 28.49 4.00e-30 125.00
IUUC-Xtr-132614 Xenopus tropicalis 72.26 0.00e+00 744.00
IUUC-Xma-133943 Xiphophorus maculatus 70.63 0.00e+00 775.00
IUUC-Yli-134552 Yarrowia lipolytica 21.71 7.00e-12 65.10
Created Date 25-Jun-2017

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