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Tag Content
UUCD2 ID IUUC-Vvi-131489
UUCD1 version UUC-ViV-00856
Ensembl Protein ID VIT_10s0071g01150.t01
UniProt Accession F6HVX7; F6HVX7_VITVI
Genbank Protein ID CCB58840.1
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Genbank Nucleotide ID FN596260
Gene Name VIT_10s0071g01150
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_10s0071g01150 VIT_10s0071g01150.t01 VIT_10s0071g01150.t01
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.40e-38 127.9 141 179
UBD/Beta-Prp 3.00e-59 201.2 14 253
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D+t+k+WDl+ g+ll+
   Q: 141  GHTRGVNAIRFtPDgRWVVSGGEDNTVKLWDLTAGKLLH 179
           8***********99999******************9986 PP
   

   UBD/Beta-Prp
   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           +h+s ++c+k+  +++++l+tg++d+++ +w + +++++ slsgh++++ +v+f++++ + + g+  +tik+wdl+  k+v+tl+gh 
   Q: 14   AHSSSVNCLKIgRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSELLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
           7999999****99********************************************9888888899********************* PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           ++  s++f+p g++++sGs d  +++wd++++ c++ t +gh++ vn +++ pdg+ +vsG+ D+tv+lWdl  gkll+++++ h+++
   Q: 102  SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH-TYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS-HEGQ 187
           ************************************.*********************************************9.**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
            ++++f++  + l++gs d+tvk+wdl+t e + +    t+ v+++ f p+++ l++g  ++s++++
   Q: 188  LQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETAGVRCMTFNPDGKTLLCGL-HESLKVF 253
           *********************************************************95.6666664 PP
   
Organism Vitis vinifera
Functional Description
(View)

Functional Description


     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
 May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MTTKRAYKLQ EFVAHSSSVN CLKIGRKSSR VLVTGGEDHK VNLWAIGKPN AILSLSGHTS 60
GIDSVSFDSS ELLVAAGAAS GTIKLWDLEE AKIVRTLTGH RSNCISVDFH PFGEFFASGS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Vvi-131489|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGTAAGCT GATAATGCGG TTGCCAGGGG AGGAGATGTC GGATGTGGCG TGGGTTTTTG 60
AGATCTGGAG TGTTCCAGAT GGAGTAAGAT AGAGTGAAGG TGCTGAGAGA ATGCTGTTAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Vvi-131489|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF13925--Katanin_con80
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing
KEGG vvi:100262947
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000954 Aegilops tauschii 64.36 7.00e-166 577.00
IUUC-Aml-002187 Ailuropoda melanoleuca 52.16 2.00e-101 362.00
IUUC-Atr-002899 Amborella trichopoda 67.04 0.00e+00 1051.00
IUUC-Apl-003305 Anas platyrhynchos 53.56 1.00e-103 369.00
IUUC-Aca-004635 Anolis carolinensis 52.54 7.00e-93 333.00
IUUC-Aly-006226 Arabidopsis lyrata 59.86 0.00e+00 931.00
IUUC-Ath-007606 Arabidopsis thaliana 61.31 0.00e+00 953.00
IUUC-Bgr-012225 Blumeria graminis 34.22 4.00e-30 125.00
IUUC-Bta-012527 Bos taurus 53.16 2.00e-104 372.00
IUUC-Bdi-014652 Brachypodium distachyon 52.00 0.00e+00 831.00
IUUC-Bol-016374 Brassica oleracea 61.15 0.00e+00 945.00
IUUC-Bra-017390 Brassica rapa 58.94 0.00e+00 916.00
IUUC-Cja-019706 Callithrix jacchus 53.16 4.00e-104 371.00
IUUC-Cfa-020139 Canis familiaris 44.26 3.00e-94 338.00
IUUC-Cpo-021710 Cavia porcellus 53.49 2.00e-105 375.00
IUUC-Cre-022746 Chlamydomonas reinhardtii 43.04 2.00e-82 299.00
IUUC-Csa-023546 Chlorocebus sabaeus 53.26 8.00e-101 360.00
IUUC-Cin-025156 Ciona intestinalis 46.98 6.00e-87 314.00
IUUC-Csv-025962 Ciona savignyi 49.48 8.00e-87 312.00
IUUC-Dre-028215 Danio rerio 53.82 3.00e-104 371.00
IUUC-Dno-029314 Dasypus novemcinctus 52.82 6.00e-104 370.00
IUUC-Dor-030482 Dipodomys ordii 53.16 5.00e-105 374.00
IUUC-Dse-031413 Dothistroma septosporum 32.92 3.00e-23 103.00
IUUC-Dme-032188 Drosophila melanogaster 37.21 5.00e-58 218.00
IUUC-Eca-034143 Equus caballus 52.82 1.00e-101 363.00
IUUC-Fca-035924 Felis catus 52.82 2.00e-104 372.00
IUUC-Fal-037387 Ficedula albicollis 54.49 1.00e-106 379.00
IUUC-Gmo-038692 Gadus morhua 53.00 1.00e-104 372.00
IUUC-Gga-040597 Gallus gallus 52.49 9.00e-105 373.00
IUUC-Gac-042004 Gasterosteus aculeatus 52.26 4.00e-100 358.00
IUUC-Gma-044134 Glycine max 70.91 0.00e+00 1073.00
IUUC-Ggo-044761 Gorilla gorilla 53.16 3.00e-104 372.00
IUUC-Hsa-045698 Homo sapiens 53.16 1.00e-104 372.00
IUUC-Hvu-047649 Hordeum vulgare 72.98 0.00e+00 691.00
IUUC-Itr-048697 Ictidomys tridecemlineatus 53.16 7.00e-105 373.00
IUUC-Lch-049674 Latimeria chalumnae 54.00 1.00e-107 383.00
IUUC-Lpe-051554 Leersia perrieri 75.16 0.00e+00 702.00
IUUC-Loc-052623 Lepisosteus oculatus 53.49 1.00e-101 363.00
IUUC-Laf-054587 Loxodonta africana 52.82 6.00e-104 370.00
IUUC-Mcc-055851 Macaca mulatta 53.16 3.00e-104 372.00
IUUC-Meu-056704 Macropus eugenii 53.49 5.00e-105 374.00
IUUC-Mpo-057381 Magnaporthe poae 35.94 3.00e-28 119.00
IUUC-Mtr-058053 Medicago truncatula 68.79 0.00e+00 1042.00
IUUC-Mga-059608 Meleagris gallopavo 52.70 2.00e-102 365.00
IUUC-Mmr-061154 Microcebus murinus 53.16 2.00e-104 372.00
IUUC-Mdo-062365 Monodelphis domestica 53.16 4.00e-104 371.00
IUUC-Mmu-063754 Mus musculus 53.16 7.00e-105 374.00
IUUC-Mac-065100 Musa acuminata 64.99 0.00e+00 1001.00
IUUC-Mpu-066245 Mustela putorius furo 53.16 9.00e-105 373.00
IUUC-Mlu-067692 Myotis lucifugus 53.36 2.00e-103 369.00
IUUC-Nle-070051 Nomascus leucogenys 52.82 3.00e-103 368.00
IUUC-Opr-070855 Ochotona princeps 52.82 1.00e-103 369.00
IUUC-Ont-071883 Oreochromis niloticus 53.49 3.00e-102 365.00
IUUC-Oan-073293 Ornithorhynchus anatinus 53.82 3.00e-101 362.00
IUUC-Ocu-074644 Oryctolagus cuniculus 53.16 7.00e-105 374.00
IUUC-Oba-075448 Oryza barthii 65.47 3.00e-180 624.00
IUUC-Obr-076385 Oryza brachyantha 75.82 0.00e+00 702.00
IUUC-Ogl-077427 Oryza glaberrima 73.94 0.00e+00 701.00
IUUC-Ogu-078428 Oryza glumaepatula 58.47 6.00e-123 434.00
IUUC-Oin-079811 Oryza indica 71.90 0.00e+00 690.00
IUUC-Olo-080245 Oryza longistaminata 54.53 0.00e+00 875.00
IUUC-Ome-081239 Oryza meridionalis 68.67 0.00e+00 634.00
IUUC-Oni-082640 Oryza nivara 65.47 3.00e-180 624.00
IUUC-Opu-083748 Oryza punctata 67.70 0.00e+00 637.00
IUUC-Oru-084609 Oryza rufipogon 65.47 3.00e-180 624.00
IUUC-Osa-085801 Oryza sativa 46.12 0.00e+00 662.00
IUUC-Ola-087483 Oryzias latipes 47.91 1.00e-94 339.00
IUUC-Oga-087964 Otolemur garnettii 53.16 1.00e-104 372.00
IUUC-Oar-089483 Ovis aries 52.82 1.00e-102 366.00
IUUC-Ptr-091387 Pan troglodytes 53.16 1.00e-104 372.00
IUUC-Pan-092623 Papio anubis 53.16 3.00e-104 372.00
IUUC-Psi-093830 Pelodiscus sinensis 53.49 3.00e-100 358.00
IUUC-Ppa-095379 Physcomitrella patens 84.05 5.00e-158 550.00
IUUC-Pfo-096755 Poecilia formosa 52.16 2.00e-101 362.00
IUUC-Pab-097564 Pongo abelii 53.16 6.00e-104 370.00
IUUC-Pop-099149 Populus trichocarpa 75.99 0.00e+00 1207.00
IUUC-Pca-100357 Procavia capensis 56.80 2.00e-76 278.00
IUUC-Ppe-101237 Prunus persica 77.24 0.00e+00 1206.00
IUUC-Pva-102397 Pteropus vampyrus 48.84 9.00e-92 330.00
IUUC-Rno-105349 Rattus norvegicus 53.16 6.00e-105 374.00
IUUC-Smo-109409 Selaginella moellendorffii 64.69 3.00e-161 561.00
IUUC-Sit-110360 Setaria italica 75.88 0.00e+00 718.00
IUUC-Sly-111307 Solanum lycopersicum 71.27 0.00e+00 1091.00
IUUC-Stu-112053 Solanum tuberosum 65.44 0.00e+00 1019.00
IUUC-Sar-112953 Sorex araneus 46.05 4.00e-58 218.00
IUUC-Ssc-115949 Sus scrofa 48.15 1.00e-49 189.00
IUUC-Tgu-117461 Taeniopygia guttata 54.49 3.00e-107 381.00
IUUC-Tru-117865 Takifugu rubripes 50.83 2.00e-95 342.00
IUUC-Tsy-119036 Tarsius syrichta 58.54 2.00e-40 159.00
IUUC-Tni-120903 Tetraodon nigroviridis 50.00 7.00e-94 337.00
IUUC-Tca-121185 Theobroma cacao 72.51 0.00e+00 1209.00
IUUC-Tae-125263 Triticum aestivum 74.44 0.00e+00 695.00
IUUC-Tur-126411 Triticum urartu 61.05 4.00e-162 564.00
IUUC-Ttr-128172 Tursiops truncatus 53.16 7.00e-105 374.00
IUUC-Xtr-132915 Xenopus tropicalis 52.65 1.00e-99 356.00
IUUC-Xma-134133 Xiphophorus maculatus 51.50 6.00e-99 354.00
Created Date 25-Jun-2017

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