iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-053640

UUCD1 version

UUC-LoA-00892

Ensembl Protein ID

ENSLAFP00000026313.1

UniProt Accession

G3UEQ5; G3UEQ5_LOXAF

Protein Name

Uncharacterized protein

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000007592.4	ENSLAFT00000007592.4	ENSLAFP00000026313.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	85.05	0.00e+00	1066.00	IUUC-Hsa-046238
E3 activity/RING/RING	79.51	0.00e+00	968.00	IUUC-Mmu-064375

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MVSQGSSPSL LEALSSDFLA CKICLEQLQV PKTLPCLHTY CQACLAQLAE GGHLRCPECR 60
EVVPVPPGGV AAFKTNFFVN GLLDLVTARA GGDLRAGKPA CALCPLMGGT STGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCTC AAGGATCCTC ACCCTCCCTC CTGGAGGCCC TGAGCAGTGA CTTCCTGGCC 60
TGTAAAATCT GCTTGGAGCA GCTTCAGGTG CCCAAAACCC TGCCGTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	84.91	0.00e+00	1102.00
IUUC-Aca-004996	Anolis carolinensis	49.59	3.00e-80	292.00
IUUC-Bta-012368	Bos taurus	85.87	0.00e+00	1152.00
IUUC-Cja-019698	Callithrix jacchus	85.30	0.00e+00	1159.00
IUUC-Csa-023090	Chlorocebus sabaeus	85.71	0.00e+00	1078.00
IUUC-Dno-030051	Dasypus novemcinctus	79.64	0.00e+00	1009.00
IUUC-Ete-032312	Echinops telfairi	92.63	5.00e-100	356.00
IUUC-Eca-033253	Equus caballus	93.38	2.00e-109	388.00
IUUC-Eeu-034772	Erinaceus europaeus	83.33	9.00e-54	203.00
IUUC-Fca-036198	Felis catus	74.37	0.00e+00	919.00
IUUC-Ggo-045486	Gorilla gorilla	85.05	0.00e+00	1076.00
IUUC-Hsa-046238	Homo sapiens	85.05	0.00e+00	1075.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	84.10	0.00e+00	1063.00
IUUC-Loc-052915	Lepisosteus oculatus	31.70	4.00e-77	282.00
IUUC-Mcc-055540	Macaca mulatta	85.85	0.00e+00	1092.00
IUUC-Mmr-060840	Microcebus murinus	84.41	0.00e+00	1101.00
IUUC-Mmu-064375	Mus musculus	79.51	0.00e+00	1053.00
IUUC-Mpu-066797	Mustela putorius furo	83.27	0.00e+00	1080.00
IUUC-Mlu-067996	Myotis lucifugus	84.37	0.00e+00	1115.00
IUUC-Nle-069238	Nomascus leucogenys	92.28	3.00e-115	407.00
IUUC-Oga-089156	Otolemur garnettii	81.60	0.00e+00	1146.00
IUUC-Oar-090056	Ovis aries	78.23	0.00e+00	994.00
IUUC-Ptr-090837	Pan troglodytes	79.60	0.00e+00	631.00
IUUC-Psi-093493	Pelodiscus sinensis	45.16	3.00e-58	219.00
IUUC-Pab-097607	Pongo abelii	85.19	0.00e+00	1103.00
IUUC-Pva-102758	Pteropus vampyrus	83.20	0.00e+00	1085.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence