iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116020

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP236151

Gene Name

FBXW5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000005839.2	ENSSSCT00000006418.2	ENSSSCP00000006249.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	88.73	0.00e+00	853.00	IUUC-Hsa-045701
E3 adaptor/Cullin RING/DCX/DWD	88.73	0.00e+00	853.00	IUUC-Hsa-045701

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

VSGPPGQNVT MDEGGTPLLP DSLVYQIFLS LGPADVLAAG LVCRQWQAVS RDEFLWREQF 60
YRYYQVARDV PRHPAATSWY EEFRRLYDRV PCVEVQTLTE HTDQVLHLSF SHSGYQFASC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCAGGGC CGCCTGGGCA GAATGTCACG ATGGACGAGG GGGGCACACC CCTGCTCCCC 60
GACAGCCTCG TTTACCAGAT CTTCCTGAGC TTGGGCCCAG CCGACGTGCT GGCCGCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0000151--C:ubiquitin ligase complex
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0010824--P:regulation of centrosome duplication
GO:0007088--P:regulation of mitotic nuclear division
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001942	Ailuropoda melanoleuca	90.18	0.00e+00	858.00
IUUC-Apl-003274	Anas platyrhynchos	74.43	0.00e+00	632.00
IUUC-Aca-004626	Anolis carolinensis	59.74	1.00e-97	349.00
IUUC-Ame-011823	Astyanax mexicanus	58.17	7.00e-144	503.00
IUUC-Bta-012523	Bos taurus	91.79	0.00e+00	886.00
IUUC-Cja-018729	Callithrix jacchus	89.55	0.00e+00	885.00
IUUC-Cfa-020303	Canis familiaris	91.48	0.00e+00	880.00
IUUC-Cpo-022134	Cavia porcellus	90.63	0.00e+00	880.00
IUUC-Csa-023253	Chlorocebus sabaeus	89.96	0.00e+00	892.00
IUUC-Cin-025742	Ciona intestinalis	32.35	1.00e-58	220.00
IUUC-Dre-027511	Danio rerio	66.80	6.00e-175	607.00
IUUC-Dno-029044	Dasypus novemcinctus	86.04	0.00e+00	833.00
IUUC-Dor-030565	Dipodomys ordii	88.30	0.00e+00	874.00
IUUC-Dme-031713	Drosophila melanogaster	38.56	1.00e-102	366.00
IUUC-Eca-033709	Equus caballus	91.63	0.00e+00	897.00
IUUC-Eeu-035093	Erinaceus europaeus	96.69	2.00e-103	369.00
IUUC-Fca-035674	Felis catus	92.06	0.00e+00	887.00
IUUC-Fal-037104	Ficedula albicollis	71.03	0.00e+00	699.00
IUUC-Gmo-039041	Gadus morhua	60.12	3.00e-155	541.00
IUUC-Gga-041230	Gallus gallus	73.02	0.00e+00	722.00
IUUC-Gac-042594	Gasterosteus aculeatus	59.62	4.00e-154	537.00
IUUC-Ggo-044486	Gorilla gorilla	89.14	0.00e+00	857.00
IUUC-Hsa-045701	Homo sapiens	89.14	0.00e+00	857.00
IUUC-Itr-048811	Ictidomys tridecemlineatus	90.67	0.00e+00	884.00
IUUC-Kpa-049204	Komagataella pastoris	31.88	2.00e-06	47.40
IUUC-Lch-050058	Latimeria chalumnae	70.37	0.00e+00	706.00
IUUC-Loc-052525	Lepisosteus oculatus	69.06	0.00e+00	629.00
IUUC-Laf-054120	Loxodonta africana	86.79	0.00e+00	859.00
IUUC-Mcc-054915	Macaca mulatta	89.96	0.00e+00	893.00
IUUC-Meu-056715	Macropus eugenii	76.37	0.00e+00	744.00
IUUC-Mga-059831	Meleagris gallopavo	72.75	3.00e-180	624.00
IUUC-Mvi-060236	Microbotryum violaceum	35.11	5.00e-08	53.50
IUUC-Mmr-060655	Microcebus murinus	89.57	0.00e+00	887.00
IUUC-Mdo-062641	Monodelphis domestica	80.76	0.00e+00	784.00
IUUC-Mmu-063471	Mus musculus	89.45	0.00e+00	877.00
IUUC-Mpu-066586	Mustela putorius furo	92.43	0.00e+00	887.00
IUUC-Nle-069429	Nomascus leucogenys	89.14	0.00e+00	886.00
IUUC-Ont-071780	Oreochromis niloticus	64.59	1.00e-173	602.00
IUUC-Ola-086458	Oryzias latipes	64.85	3.00e-176	611.00
IUUC-Oga-088739	Otolemur garnettii	89.55	0.00e+00	888.00
IUUC-Oar-089275	Ovis aries	94.19	3.00e-47	178.00
IUUC-Ptr-090716	Pan troglodytes	86.68	0.00e+00	670.00
IUUC-Pan-092182	Papio anubis	80.12	0.00e+00	767.00
IUUC-Psi-093449	Pelodiscus sinensis	74.36	0.00e+00	724.00
IUUC-Pma-094289	Petromyzon marinus	52.44	8.00e-147	513.00
IUUC-Pfo-096062	Poecilia formosa	63.38	5.00e-173	600.00
IUUC-Pab-098726	Pongo abelii	87.27	0.00e+00	860.00
IUUC-Pca-100163	Procavia capensis	82.86	1.00e-83	303.00
IUUC-Pva-103051	Pteropus vampyrus	93.64	7.00e-94	337.00
IUUC-Rno-105707	Rattus norvegicus	89.25	0.00e+00	858.00
IUUC-Sha-107074	Sarcophilus harrisii	80.24	0.00e+00	790.00
IUUC-Tgu-116683	Taeniopygia guttata	68.10	3.00e-92	330.00
IUUC-Tru-118143	Takifugu rubripes	63.95	6.00e-171	593.00
IUUC-Tni-120777	Tetraodon nigroviridis	63.81	8.00e-171	593.00
IUUC-Ttr-128439	Tursiops truncatus	91.17	0.00e+00	889.00
IUUC-Xtr-132774	Xenopus tropicalis	53.36	6.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence