iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093842

Ensembl Protein ID

ENSPSIP00000006480.1

UniProt Accession

K7FEM0; K7FEM0_PELSI

Genbank Protein ID

ENSPSIP00000006480

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01136650

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000006006.1	ENSPSIT00000006517.1	ENSPSIP00000006480.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	47.28	8.00e-91	334.00	IUUC-Hsa-047035

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MEELDNDFKE LCANLLSRVK KKAGDAEGGR KVQSRTRSTA TKSQLKKSKS AAKSKSQPGS 60
SIGKGVGCPG PTTPNGQALG HEPEGEATAC GNAGPPLGDG NGDPPSVTQL HAMAPKCKQN 120

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Nucleotide Sequence
(Fasta)

AGAACGAGGT TTGGGAGGTG GCCTTTGTGT AGCGATGATG GGGGTTTACG CATGCGCGAA 60
GAAGCCAGAC GACGGAAAGC GGTCCACGAA TGCTACCCGC TAACGGCCGC CGTTTCTTCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

KEGG

pss:102447442

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	48.86	2.00e-150	527.00
IUUC-Apl-003261	Anas platyrhynchos	46.22	0.00e+00	1015.00
IUUC-Aca-004455	Anolis carolinensis	65.22	4.00e-21	91.70
IUUC-Ame-010993	Astyanax mexicanus	37.39	2.00e-09	55.50
IUUC-Bta-013472	Bos taurus	42.30	7.00e-133	469.00
IUUC-Cel-018663	Caenorhabditis elegans	29.63	1.00e-04	41.60
IUUC-Cja-019406	Callithrix jacchus	41.94	9.00e-125	442.00
IUUC-Cfa-020129	Canis familiaris	42.74	3.00e-145	510.00
IUUC-Cpo-021944	Cavia porcellus	45.76	5.00e-136	479.00
IUUC-Csa-023941	Chlorocebus sabaeus	45.39	3.00e-61	229.00
IUUC-Cho-024847	Choloepus hoffmanni	50.85	1.00e-66	249.00
IUUC-Cin-025405	Ciona intestinalis	42.31	2.00e-06	46.20
IUUC-Csv-025916	Ciona savignyi	33.77	6.00e-08	50.80
IUUC-Dre-027764	Danio rerio	34.69	2.00e-75	278.00
IUUC-Dno-030083	Dasypus novemcinctus	42.17	9.00e-122	432.00
IUUC-Dor-031129	Dipodomys ordii	46.27	1.00e-116	414.00
IUUC-Dse-031510	Dothistroma septosporum	41.67	1.20e-02	35.80
IUUC-Ete-032536	Echinops telfairi	62.71	1.00e-13	72.80
IUUC-Eca-033407	Equus caballus	48.34	1.00e-103	371.00
IUUC-Eeu-034473	Erinaceus europaeus	46.08	1.00e-19	92.40
IUUC-Fca-035730	Felis catus	46.12	8.00e-141	495.00
IUUC-Fal-036850	Ficedula albicollis	46.50	0.00e+00	1226.00
IUUC-Gmo-038677	Gadus morhua	40.53	9.00e-34	138.00
IUUC-Gga-041088	Gallus gallus	47.63	0.00e+00	1292.00
IUUC-Gac-041824	Gasterosteus aculeatus	84.21	5.00e-15	73.90
IUUC-Ggo-045642	Gorilla gorilla	48.94	3.00e-126	446.00
IUUC-Hsa-047035	Homo sapiens	44.00	2.00e-140	494.00
IUUC-Itr-049010	Ictidomys tridecemlineatus	44.23	9.00e-146	511.00
IUUC-Kpa-049328	Komagataella pastoris	29.73	1.00e-03	38.10
IUUC-Lch-050364	Latimeria chalumnae	45.44	2.00e-87	317.00
IUUC-Loc-052423	Lepisosteus oculatus	40.36	1.00e-89	325.00
IUUC-Laf-053910	Loxodonta africana	38.34	0.00e+00	677.00
IUUC-Mcc-055883	Macaca mulatta	49.74	2.00e-40	161.00
IUUC-Meu-056224	Macropus eugenii	47.37	4.00e-81	296.00
IUUC-Mga-059880	Meleagris gallopavo	45.89	0.00e+00	989.00
IUUC-Mvi-060510	Microbotryum violaceum	32.73	2.00e-04	41.20
IUUC-Mmr-061715	Microcebus murinus	47.93	4.00e-144	506.00
IUUC-Mdo-062426	Monodelphis domestica	40.25	8.00e-178	618.00
IUUC-Mmu-063947	Mus musculus	44.76	5.00e-133	469.00
IUUC-Mpu-066184	Mustela putorius furo	46.27	2.00e-139	490.00
IUUC-Mlu-067533	Myotis lucifugus	47.19	7.00e-136	478.00
IUUC-Nle-069204	Nomascus leucogenys	43.30	8.00e-133	468.00
IUUC-Opr-070377	Ochotona princeps	41.14	2.00e-135	477.00
IUUC-Ont-072551	Oreochromis niloticus	36.31	4.00e-36	147.00
IUUC-Oan-073350	Ornithorhynchus anatinus	47.16	4.00e-95	341.00
IUUC-Ocu-074915	Oryctolagus cuniculus	40.02	2.00e-128	454.00
IUUC-Ola-087360	Oryzias latipes	68.12	1.00e-23	102.00
IUUC-Oga-089106	Otolemur garnettii	46.17	1.00e-97	351.00
IUUC-Oar-089289	Ovis aries	42.87	6.00e-128	452.00
IUUC-Ptr-091469	Pan troglodytes	44.00	2.00e-136	481.00
IUUC-Pan-091841	Papio anubis	46.54	3.00e-85	310.00
IUUC-Pma-094732	Petromyzon marinus	83.33	3.00e-07	48.10
IUUC-Pfo-097299	Poecilia formosa	40.61	1.00e-38	155.00
IUUC-Pab-098271	Pongo abelii	43.88	6.00e-137	482.00
IUUC-Pca-100721	Procavia capensis	43.68	2.00e-137	484.00
IUUC-Pva-102276	Pteropus vampyrus	39.79	0.00e+00	761.00
IUUC-Rno-105619	Rattus norvegicus	42.95	2.00e-145	511.00
IUUC-Sha-106722	Sarcophilus harrisii	41.34	0.00e+00	648.00
IUUC-Sar-113673	Sorex araneus	41.44	5.00e-47	183.00
IUUC-Sre-115039	Sporisorium reilianum	32.08	1.00e-03	37.00
IUUC-Ssc-115383	Sus scrofa	44.64	2.00e-117	417.00
IUUC-Tgu-117243	Taeniopygia guttata	56.14	2.00e-120	425.00
IUUC-Tru-118092	Takifugu rubripes	77.59	1.00e-22	100.00
IUUC-Tsy-119362	Tarsius syrichta	41.39	1.00e-58	222.00
IUUC-Tni-120380	Tetraodon nigroviridis	78.57	3.00e-22	98.20
IUUC-Tbe-127404	Tupaia belangeri	28.61	6.00e-45	177.00
IUUC-Ttr-128317	Tursiops truncatus	37.47	0.00e+00	650.00
IUUC-Uma-129640	Ustilago maydis	35.59	7.00e-06	44.30
IUUC-Xtr-132533	Xenopus tropicalis	44.04	5.00e-105	376.00
IUUC-Xma-134059	Xiphophorus maculatus	41.20	8.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence