iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116779

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01042027

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000002634.1	ENSTGUT00000002756.1	ENSTGUP00000002728.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-09	36.9	277	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 277  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCNA 322
           79*********....9******************.*******7.******85 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

EMSENEEEIE EKSESEGSDY SPNKKKKKKL KDKKEKKPKR KKKDEEEDDN EDGSLKEPKS 60
SAQLMEEWGL DDVDYVFSEE DYHTLTNYKA FSQFLRPLIA KKNPKIPMSK MMTVLGAKWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAATGTCAG AAAACGAAGA GGAGATTGAG GAGAAATCAG AGAGTGAAGG GAGTGACTAT 60
TCTCCCAACA AAAAGAAGAA GAAAAAACTG AAAGACAAGA AGGAGAAAAA GCCAAAACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	83.20	0.00e+00	2572.00
IUUC-Apl-003406	Anas platyrhynchos	82.34	0.00e+00	2465.00
IUUC-Aca-004671	Anolis carolinensis	78.99	0.00e+00	2455.00
IUUC-Aly-005645	Arabidopsis lyrata	38.68	2.00e-149	524.00
IUUC-Ath-007406	Arabidopsis thaliana	39.58	5.00e-154	539.00
IUUC-Ame-011883	Astyanax mexicanus	81.26	0.00e+00	1860.00
IUUC-Bta-012951	Bos taurus	81.38	0.00e+00	2329.00
IUUC-Bol-016073	Brassica oleracea	40.42	2.00e-154	540.00
IUUC-Bra-016724	Brassica rapa	40.86	5.00e-156	545.00
IUUC-Cja-018871	Callithrix jacchus	76.95	0.00e+00	2311.00
IUUC-Cfa-021063	Canis familiaris	83.81	0.00e+00	2129.00
IUUC-Cpo-022083	Cavia porcellus	81.14	0.00e+00	2522.00
IUUC-Csa-023084	Chlorocebus sabaeus	83.25	0.00e+00	2589.00
IUUC-Dre-028226	Danio rerio	77.35	0.00e+00	2245.00
IUUC-Ete-032757	Echinops telfairi	69.92	0.00e+00	1811.00
IUUC-Eca-034372	Equus caballus	83.87	0.00e+00	2164.00
IUUC-Fca-036048	Felis catus	83.41	0.00e+00	2130.00
IUUC-Fal-037282	Ficedula albicollis	88.74	0.00e+00	2744.00
IUUC-Gga-040607	Gallus gallus	86.53	0.00e+00	2248.00
IUUC-Ggo-044514	Gorilla gorilla	83.03	0.00e+00	2590.00
IUUC-Hsa-046181	Homo sapiens	83.20	0.00e+00	2580.00
IUUC-Loc-052795	Lepisosteus oculatus	77.61	0.00e+00	2459.00
IUUC-Laf-053749	Loxodonta africana	83.88	0.00e+00	2185.00
IUUC-Mcc-055856	Macaca mulatta	83.20	0.00e+00	2591.00
IUUC-Meu-056050	Macropus eugenii	73.45	0.00e+00	736.00
IUUC-Mga-059630	Meleagris gallopavo	85.93	0.00e+00	2633.00
IUUC-Mmr-060986	Microcebus murinus	80.82	0.00e+00	2484.00
IUUC-Mmu-063644	Mus musculus	82.23	0.00e+00	2564.00
IUUC-Mpu-066528	Mustela putorius furo	80.92	0.00e+00	2515.00
IUUC-Nle-069824	Nomascus leucogenys	80.24	0.00e+00	2325.00
IUUC-Ont-072647	Oreochromis niloticus	76.15	0.00e+00	2220.00
IUUC-Oan-072885	Ornithorhynchus anatinus	85.66	0.00e+00	1297.00
IUUC-Ola-086961	Oryzias latipes	75.17	0.00e+00	2164.00
IUUC-Oga-088775	Otolemur garnettii	82.74	0.00e+00	2544.00
IUUC-Oar-090301	Ovis aries	81.10	0.00e+00	2468.00
IUUC-Ptr-090586	Pan troglodytes	81.45	0.00e+00	2545.00
IUUC-Pan-092282	Papio anubis	83.25	0.00e+00	2586.00
IUUC-Psi-093007	Pelodiscus sinensis	80.94	0.00e+00	2160.00
IUUC-Pfo-096802	Poecilia formosa	75.49	0.00e+00	2022.00
IUUC-Pab-097677	Pongo abelii	86.55	0.00e+00	2151.00
IUUC-Pca-100559	Procavia capensis	80.62	0.00e+00	1998.00
IUUC-Rno-105378	Rattus norvegicus	82.17	0.00e+00	2540.00
IUUC-Sha-107350	Sarcophilus harrisii	77.61	0.00e+00	2307.00
IUUC-Smo-108946	Selaginella moellendorffii	38.74	8.00e-156	545.00
IUUC-Ssc-116303	Sus scrofa	80.54	0.00e+00	2123.00
IUUC-Tru-117597	Takifugu rubripes	75.00	0.00e+00	2211.00
IUUC-Ttr-128301	Tursiops truncatus	83.44	0.00e+00	2561.00
IUUC-Vpa-130209	Vicugna pacos	89.16	2.00e-165	577.00
IUUC-Xtr-132668	Xenopus tropicalis	78.66	0.00e+00	2286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence