iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113902

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G502400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g046930	Sb01g046930.1	Sb01g046930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-07	30.0	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++ ++ lp C H+fh dC+  w         + +CPlCr
   Q: 130  CAVCLGEFapgER-LKQLPtCSHAFHIDCIDTW------LHHNVSCPLCR 172
           ********88666.89999**************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDAAGMAAGA PIPAPDASSS PPPYDGNGTA AFPIAIVIAI GFMVTSLILI SYYFLVVRCW 60
LRGGGPGSGV LLHRARREDR HLVERVSAVF FTDHEAAELP GGLDPDVVAA LPVVRYHRRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGG CGGGCATGGC GGCAGGCGCG CCGATACCGG CGCCGGACGC GTCGTCGTCC 60
CCGCCTCCGT ACGACGGCAA CGGCACGGCG GCGTTCCCGA TCGCCATCGT CATCGCGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g046930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001415	Ailuropoda melanoleuca	39.24	1.00e-13	70.90
IUUC-Bdi-014188	Brachypodium distachyon	61.00	2.00e-53	201.00
IUUC-Cja-018980	Callithrix jacchus	39.24	7.00e-14	71.60
IUUC-Cfa-020416	Canis familiaris	39.24	1.00e-13	70.90
IUUC-Cre-022755	Chlamydomonas reinhardtii	56.52	2.00e-13	65.90
IUUC-Csa-023246	Chlorocebus sabaeus	39.24	8.00e-14	71.60
IUUC-Eca-033892	Equus caballus	39.24	1.00e-13	70.50
IUUC-Ggo-044902	Gorilla gorilla	39.24	7.00e-14	71.60
IUUC-Hsa-046548	Homo sapiens	39.24	7.00e-14	71.60
IUUC-Hvu-047590	Hordeum vulgare	54.40	1.00e-42	164.00
IUUC-Lch-050541	Latimeria chalumnae	41.76	5.00e-15	75.50
IUUC-Lpe-050960	Leersia perrieri	60.07	2.00e-70	258.00
IUUC-Laf-054296	Loxodonta africana	39.24	6.00e-14	72.00
IUUC-Mcc-054858	Macaca mulatta	39.24	1.00e-13	70.90
IUUC-Mmr-060699	Microcebus murinus	39.24	6.00e-14	72.00
IUUC-Mdo-063008	Monodelphis domestica	35.11	3.00e-14	72.40
IUUC-Mpu-065891	Mustela putorius furo	39.24	1.00e-13	70.90
IUUC-Nle-069127	Nomascus leucogenys	39.24	6.00e-14	72.00
IUUC-Ogl-077230	Oryza glaberrima	72.60	6.00e-77	280.00
IUUC-Ogu-078188	Oryza glumaepatula	73.06	1.00e-82	298.00
IUUC-Oin-080105	Oryza indica	73.06	1.00e-82	298.00
IUUC-Ome-081520	Oryza meridionalis	72.15	1.00e-79	288.00
IUUC-Oni-082693	Oryza nivara	73.06	1.00e-82	298.00
IUUC-Opu-083701	Oryza punctata	72.08	4.00e-73	266.00
IUUC-Oru-084576	Oryza rufipogon	72.73	3.00e-82	296.00
IUUC-Osa-085526	Oryza sativa	72.60	2.00e-79	287.00
IUUC-Oga-088750	Otolemur garnettii	40.51	4.00e-14	72.40
IUUC-Ptr-091533	Pan troglodytes	39.24	7.00e-14	71.60
IUUC-Pan-092675	Papio anubis	39.24	9.00e-14	71.20
IUUC-Pab-098486	Pongo abelii	39.24	7.00e-14	71.60
IUUC-Sit-110758	Setaria italica	81.12	1.00e-103	368.00
IUUC-Ssc-115345	Sus scrofa	41.05	8.00e-15	74.30
IUUC-Tae-123268	Triticum aestivum	61.15	1.00e-63	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence