iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116189

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP015896

Gene Name

RC3H1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015498.2	ENSSSCT00000016884.2	ENSSSCP00000016433.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	97.35	0.00e+00	1909.00	IUUC-Hsa-046163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MPVQAPQWTD FLSCPICTQT FDETIRKPIS LGCGHTVCKM CLNKLHRKAC PFDQTTINTD 60
IELLPVNSAL LQLVGAQVPE QQPITLCSGV EDTKHYEEAK KCVEELALYL KPLSSARGVG 120

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Nucleotide Sequence
(Fasta)

CGTCTCCGCC CCAGTCTCTG GGGCGGGCCG GAGCCCGAGG AAGAGGAAGG GGGCGAGGAC 60
AACGAGCGAC CGGGCGGGGG CGGAGGAGGA GGAGGAAGAG GAGGCAGACC AACAAGATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032671--RC3H1
IPR027370--Znf-RING_LisH
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0000932--C:P-body
GO:0003730--F:mRNA 3'-UTR binding
GO:0035613--F:RNA stem-loop binding
GO:0008270--F:zinc ion binding
GO:0061158--P:3'-UTR-mediated mRNA destabilization
GO:0001782--P:B cell homeostasis
GO:0071347--P:cellular response to interleukin-1
GO:0033962--P:cytoplasmic mRNA processing body assembly
GO:0048535--P:lymph node development
GO:0046007--P:negative regulation of activated T cell proliferation
GO:0030889--P:negative regulation of B cell proliferation
GO:0002635--P:negative regulation of germinal center formation
GO:0045623--P:negative regulation of T-helper cell differentiation
GO:0000288--P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0061014--P:positive regulation of mRNA catabolic process
GO:1901224--P:positive regulation of NIK/NF-kappaB signaling
GO:0050856--P:regulation of T cell receptor signaling pathway
GO:0048536--P:spleen development
GO:0043029--P:T cell homeostasis
GO:0042098--P:T cell proliferation
GO:0061470--P:T follicular helper cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001700	Ailuropoda melanoleuca	96.65	0.00e+00	1950.00
IUUC-Apl-003290	Anas platyrhynchos	86.99	0.00e+00	1848.00
IUUC-Aca-004905	Anolis carolinensis	84.88	0.00e+00	1722.00
IUUC-Ame-011475	Astyanax mexicanus	77.92	0.00e+00	920.00
IUUC-Cja-019907	Callithrix jacchus	96.65	0.00e+00	1993.00
IUUC-Cfa-020679	Canis familiaris	96.91	0.00e+00	1952.00
IUUC-Cpo-022110	Cavia porcellus	92.17	0.00e+00	1937.00
IUUC-Csa-024166	Chlorocebus sabaeus	97.24	0.00e+00	1929.00
IUUC-Dno-029870	Dasypus novemcinctus	94.86	0.00e+00	974.00
IUUC-Dor-030934	Dipodomys ordii	87.15	0.00e+00	1486.00
IUUC-Dme-031708	Drosophila melanogaster	64.51	9.00e-163	566.00
IUUC-Ete-032652	Echinops telfairi	95.69	0.00e+00	1381.00
IUUC-Eca-033236	Equus caballus	96.47	0.00e+00	1929.00
IUUC-Eeu-035091	Erinaceus europaeus	83.30	0.00e+00	877.00
IUUC-Fca-035773	Felis catus	97.27	0.00e+00	1961.00
IUUC-Fal-036972	Ficedula albicollis	86.10	0.00e+00	1834.00
IUUC-Gmo-039303	Gadus morhua	80.58	0.00e+00	894.00
IUUC-Ggo-044691	Gorilla gorilla	90.96	0.00e+00	1842.00
IUUC-Hsa-046163	Homo sapiens	97.35	0.00e+00	2008.00
IUUC-Itr-048266	Ictidomys tridecemlineatus	93.97	0.00e+00	1050.00
IUUC-Lch-050667	Latimeria chalumnae	74.50	0.00e+00	1536.00
IUUC-Loc-052404	Lepisosteus oculatus	69.29	0.00e+00	1333.00
IUUC-Laf-053618	Loxodonta africana	96.99	0.00e+00	1901.00
IUUC-Mcc-054692	Macaca mulatta	97.35	0.00e+00	2010.00
IUUC-Meu-056025	Macropus eugenii	85.22	0.00e+00	925.00
IUUC-Mmr-061188	Microcebus murinus	97.09	0.00e+00	1958.00
IUUC-Mdo-063035	Monodelphis domestica	92.25	0.00e+00	1885.00
IUUC-Mmu-064146	Mus musculus	93.03	0.00e+00	1914.00
IUUC-Mpu-066217	Mustela putorius furo	96.20	0.00e+00	1938.00
IUUC-Mlu-068023	Myotis lucifugus	95.50	0.00e+00	1951.00
IUUC-Nle-069506	Nomascus leucogenys	97.62	0.00e+00	2016.00
IUUC-Opr-070587	Ochotona princeps	83.20	0.00e+00	1591.00
IUUC-Ont-071278	Oreochromis niloticus	78.16	0.00e+00	894.00
IUUC-Oan-073500	Ornithorhynchus anatinus	91.18	0.00e+00	1922.00
IUUC-Ocu-074299	Oryctolagus cuniculus	96.24	0.00e+00	1844.00
IUUC-Ola-086665	Oryzias latipes	79.33	0.00e+00	910.00
IUUC-Oga-088519	Otolemur garnettii	89.96	0.00e+00	1750.00
IUUC-Oar-089246	Ovis aries	96.49	0.00e+00	1838.00
IUUC-Ptr-091102	Pan troglodytes	97.44	0.00e+00	2011.00
IUUC-Pan-091952	Papio anubis	97.18	0.00e+00	2011.00
IUUC-Pfo-097227	Poecilia formosa	61.72	0.00e+00	1165.00
IUUC-Pab-097975	Pongo abelii	93.92	0.00e+00	1913.00
IUUC-Pca-101127	Procavia capensis	91.54	0.00e+00	1310.00
IUUC-Pva-102431	Pteropus vampyrus	88.26	0.00e+00	1746.00
IUUC-Ptt-103758	Puccinia triticina	40.43	2.00e-05	42.40
IUUC-Sha-106690	Sarcophilus harrisii	91.20	0.00e+00	1870.00
IUUC-Tgu-116527	Taeniopygia guttata	87.09	0.00e+00	1845.00
IUUC-Tru-118389	Takifugu rubripes	62.80	0.00e+00	1214.00
IUUC-Tsy-119193	Tarsius syrichta	93.47	0.00e+00	1883.00
IUUC-Tni-119790	Tetraodon nigroviridis	64.51	0.00e+00	1115.00
IUUC-Tbe-127445	Tupaia belangeri	90.58	0.00e+00	1528.00
IUUC-Ttr-128877	Tursiops truncatus	96.65	0.00e+00	1890.00
IUUC-Xtr-132274	Xenopus tropicalis	78.59	0.00e+00	1594.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence