iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110248

Ensembl Protein ID

Si016507m

UniProt Accession

K3YQG4; K3YQG4_SETIT

Genbank Protein ID

KQL31700.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

LOC101754779; SETIT_016507mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si016507m.g	Si016583m	Si016583m
Si016507m.g	Si016507m	Si016507m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-07	31.1	69	129
E3 adaptor/Cullin RING/DCX/DWD	4.00e-27	94.0	569	606
UBD/Beta-Prp	2.70e-41	142.6	393	693

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliq 66
           ++lCpI + + +d   +++G+++   +I  +l+++   cP +r+ lt+ +l Pn  l ++ +
   Q: 69   DLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSRKSD-CPCCRHYLTKAQLYPNFLLDKVLK 129
           689********************************99.****************98866655 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 569  GHKKAVSYVKFlSNNELASASTDSTLRLWDVKDNCPVR 606
           8999*******9889****************9998876 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkghedsvls 99
            + ++++ f +d++l+at++ +++ikv+++++           + ++   + + +++++++ +   v +s+D  +++ vwd++t++ v+ +++he++++s
   Q: 393  ANIVSSIEFDRDDELFATAGVSKRIKVFEFSSVVNepsdvhcpVVEMATRS-KLSCLSWNKYS-KNVIASSDyeGIVTVWDVQTRQSVMEYEEHEKRAWS 490
           567899**************************4447777666655554444.599****9998.5677777777************************** PP
   S: 100  lsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkl.lrtltgghtdsvyslsfdsngkelv 196
           ++fs++  + lvsGs+d  ++vw ++++  +   +   ++ +++v+++p + ++++ Gs+D  +  +dl++ +  ++ + g h+++v  ++f sn +el+
   Q: 491  VDFSRTEpSMLVSGSDDCKVKVWCTKQEASVI--NIDMKANICSVKYNPGSnFYVAVGSADHHIHYFDLRNPSApVHIFGG-HKKAVSYVKFLSN-NELA 586
           *****888***************988888885..5556666********999*****************987753888876.************8.7*** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............ssvisvavlsfgdnvlvl 282
           s+s+d+t++lwd++ +  vrt++gh++  + v +s n+e++++gs+ + ++++   ++ + k  + h+              s +is  +++ + + +++
   Q: 587  SASTDSTLRLWDVKDNCPVRTFRGHKNEKNFVGLSVNNEYIACGSETNEVFVY---HKAISKPAASHRfvssdlddadddpgSYFISAVCWKSDSPTMLT 683
           ****************99**********************************9...67777777777788888999*****999999999********** PP
   S: 283  gsedskvniw 292
           + + ++++++
   Q: 684  ANSQGTIKVL 693
           *******997 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MGDSSVAGAL VPSVPKPEAA PSGDASTAAA ATTAALALAL AEEAGARAAS ASASPQGPAA 60
EGEGPADRDL LCPICMAVIK DAFLTACGHS FCYMCIVTHL SRKSDCPCCR HYLTKAQLYP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATCACCAC ATCCCACCAG GCCATTCCCA CCACCATCAC CACCCACCCC GACCCCGTAT 60
GCAATTATTC GCACCCGGAC GCCACCGCCT CCGCCTCCAC CACCACCGCA TCCGCCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

KEGG

sita:101754779

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	87.85	0.00e+00	1154.00
IUUC-Aml-001265	Ailuropoda melanoleuca	38.79	9.00e-123	433.00
IUUC-Atr-002460	Amborella trichopoda	77.34	0.00e+00	971.00
IUUC-Apl-003796	Anas platyrhynchos	38.36	2.00e-116	412.00
IUUC-Aca-005078	Anolis carolinensis	38.38	3.00e-120	425.00
IUUC-Aly-006014	Arabidopsis lyrata	73.85	0.00e+00	968.00
IUUC-Ath-007636	Arabidopsis thaliana	73.32	0.00e+00	972.00
IUUC-Ame-011176	Astyanax mexicanus	53.72	1.00e-37	150.00
IUUC-Bta-012595	Bos taurus	38.92	2.00e-123	436.00
IUUC-Bdi-014152	Brachypodium distachyon	85.22	0.00e+00	1198.00
IUUC-Bol-016380	Brassica oleracea	72.96	0.00e+00	960.00
IUUC-Bra-017690	Brassica rapa	71.74	0.00e+00	933.00
IUUC-Cja-018926	Callithrix jacchus	38.58	1.00e-122	433.00
IUUC-Cfa-021088	Canis familiaris	38.87	1.00e-123	436.00
IUUC-Cpo-022442	Cavia porcellus	38.28	2.00e-116	412.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	31.39	1.00e-36	145.00
IUUC-Csa-024119	Chlorocebus sabaeus	38.77	2.00e-122	432.00
IUUC-Cin-025375	Ciona intestinalis	38.36	1.00e-116	413.00
IUUC-Cme-027350	Cyanidioschyzon merolae	44.08	7.00e-90	324.00
IUUC-Dre-028453	Danio rerio	47.31	3.00e-103	369.00
IUUC-Dno-029887	Dasypus novemcinctus	39.45	7.00e-123	434.00
IUUC-Dor-031110	Dipodomys ordii	51.97	5.00e-91	328.00
IUUC-Ete-033016	Echinops telfairi	51.80	7.00e-91	327.00
IUUC-Eca-034403	Equus caballus	38.20	2.00e-116	412.00
IUUC-Eeu-034690	Erinaceus europaeus	51.96	1.00e-85	309.00
IUUC-Fca-036475	Felis catus	38.36	2.00e-116	412.00
IUUC-Fal-037189	Ficedula albicollis	38.78	4.00e-123	434.00
IUUC-Gmo-039245	Gadus morhua	37.11	1.00e-114	406.00
IUUC-Gga-040806	Gallus gallus	38.86	3.00e-123	435.00
IUUC-Gac-042177	Gasterosteus aculeatus	38.98	7.00e-120	424.00
IUUC-Gma-044187	Glycine max	72.43	0.00e+00	933.00
IUUC-Ggo-044430	Gorilla gorilla	35.08	2.00e-78	286.00
IUUC-Hsa-045853	Homo sapiens	38.86	4.00e-123	434.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	52.42	2.00e-70	258.00
IUUC-Lch-050420	Latimeria chalumnae	39.32	7.00e-122	430.00
IUUC-Lpe-051219	Leersia perrieri	88.37	0.00e+00	1216.00
IUUC-Loc-052728	Lepisosteus oculatus	38.92	3.00e-113	402.00
IUUC-Laf-053775	Loxodonta africana	38.79	4.00e-123	434.00
IUUC-Meu-056595	Macropus eugenii	38.28	2.00e-56	213.00
IUUC-Mtr-058555	Medicago truncatula	72.99	0.00e+00	952.00
IUUC-Mga-059646	Meleagris gallopavo	38.36	3.00e-116	411.00
IUUC-Mmr-060990	Microcebus murinus	38.79	2.00e-122	432.00
IUUC-Mdo-062287	Monodelphis domestica	38.86	4.00e-123	434.00
IUUC-Mmu-064097	Mus musculus	38.71	4.00e-123	434.00
IUUC-Mac-065240	Musa acuminata	80.82	0.00e+00	1036.00
IUUC-Mpu-066612	Mustela putorius furo	38.33	3.00e-116	411.00
IUUC-Mlu-067967	Myotis lucifugus	38.24	8.00e-115	406.00
IUUC-Nle-069543	Nomascus leucogenys	38.92	4.00e-123	434.00
IUUC-Opr-070366	Ochotona princeps	43.90	2.00e-45	176.00
IUUC-Ont-071522	Oreochromis niloticus	37.67	8.00e-119	420.00
IUUC-Oan-073409	Ornithorhynchus anatinus	38.30	9.00e-115	406.00
IUUC-Ocu-073756	Oryctolagus cuniculus	38.44	4.00e-118	417.00
IUUC-Oba-075149	Oryza barthii	88.92	0.00e+00	1251.00
IUUC-Obr-076563	Oryza brachyantha	92.88	0.00e+00	1223.00
IUUC-Ogl-077701	Oryza glaberrima	89.24	0.00e+00	1259.00
IUUC-Ogu-078383	Oryza glumaepatula	89.24	0.00e+00	1259.00
IUUC-Oin-079965	Oryza indica	88.36	0.00e+00	1140.00
IUUC-Olo-080639	Oryza longistaminata	90.48	0.00e+00	1209.00
IUUC-Ome-081821	Oryza meridionalis	92.80	0.00e+00	1147.00
IUUC-Oni-082622	Oryza nivara	89.24	0.00e+00	1259.00
IUUC-Opu-083295	Oryza punctata	89.67	0.00e+00	1259.00
IUUC-Oru-084661	Oryza rufipogon	89.24	0.00e+00	1259.00
IUUC-Osa-085766	Oryza sativa	89.24	0.00e+00	1259.00
IUUC-Ola-086727	Oryzias latipes	39.51	9.00e-123	433.00
IUUC-Olu-087702	Ostreococcus lucimarinus	48.70	3.00e-78	284.00
IUUC-Oga-088215	Otolemur garnettii	38.44	3.00e-118	418.00
IUUC-Oar-089880	Ovis aries	38.44	3.00e-118	418.00
IUUC-Ptr-090597	Pan troglodytes	38.86	4.00e-123	434.00
IUUC-Pan-091987	Papio anubis	38.86	2.00e-123	435.00
IUUC-Psi-094033	Pelodiscus sinensis	38.39	2.00e-118	419.00
IUUC-Pma-094587	Petromyzon marinus	36.58	5.00e-107	380.00
IUUC-Ppa-095401	Physcomitrella patens	64.38	0.00e+00	803.00
IUUC-Pfo-097388	Poecilia formosa	46.80	6.00e-103	367.00
IUUC-Pab-098029	Pongo abelii	38.92	2.00e-123	435.00
IUUC-Pop-099319	Populus trichocarpa	73.06	0.00e+00	951.00
IUUC-Pca-100846	Procavia capensis	46.73	7.00e-103	367.00
IUUC-Ppe-101250	Prunus persica	64.95	0.00e+00	862.00
IUUC-Pva-102407	Pteropus vampyrus	38.71	9.00e-120	423.00
IUUC-Rno-105312	Rattus norvegicus	38.71	1.00e-122	433.00
IUUC-Sha-106514	Sarcophilus harrisii	46.40	2.00e-98	351.00
IUUC-Smo-109418	Selaginella moellendorffii	61.28	0.00e+00	780.00
IUUC-Sly-110895	Solanum lycopersicum	74.65	0.00e+00	984.00
IUUC-Stu-112882	Solanum tuberosum	71.79	0.00e+00	905.00
IUUC-Sar-113230	Sorex araneus	43.00	2.00e-67	249.00
IUUC-Sbi-113962	Sorghum bicolor	91.47	0.00e+00	1257.00
IUUC-Ssc-115987	Sus scrofa	27.30	1.00e-24	106.00
IUUC-Tgu-116471	Taeniopygia guttata	38.64	3.00e-122	431.00
IUUC-Tru-118231	Takifugu rubripes	47.95	1.00e-103	370.00
IUUC-Tsy-119415	Tarsius syrichta	38.07	8.00e-115	406.00
IUUC-Tni-120893	Tetraodon nigroviridis	47.95	1.00e-103	370.00
IUUC-Tca-121619	Theobroma cacao	72.87	0.00e+00	961.00
IUUC-Tae-125524	Triticum aestivum	84.17	0.00e+00	1191.00
IUUC-Tur-126557	Triticum urartu	89.42	0.00e+00	1162.00
IUUC-Tbe-127253	Tupaia belangeri	43.28	5.00e-69	254.00
IUUC-Ttr-129100	Tursiops truncatus	38.51	1.00e-114	406.00
IUUC-Vpa-130613	Vicugna pacos	35.24	2.00e-100	359.00
IUUC-Vvi-130880	Vitis vinifera	78.97	0.00e+00	974.00
IUUC-Xtr-132033	Xenopus tropicalis	39.47	9.00e-129	453.00
IUUC-Xma-133421	Xiphophorus maculatus	46.80	7.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence