iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000005870.2	ENSCJAT00000011495.1	ENSCJAP00000010885.1
ENSCJAG00000005870.2	ENSCJAT00000011535.2	ENSCJAP00000010924.2
ENSCJAG00000005870.2	ENSCJAT00000011512.2	ENSCJAP00000010902.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-14	53.2	326	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C +g+ed+ +l+ C+ C++++H  Cl ++  +e p+   w CpkC 
   Q: 326  VCRMCSRGDEDD-KLLLCDGCDDNYHIFCLLPP-LPEIPKGV-WRCPKCV 372
           8*********88.6*******************.*******8.******6 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MDPGSDDFLP PPECPVFEPS WAEFRDPLGY IAKIRPIAEK SGICKIRPPA GRTGSTFAVE 60
VDNFRFTPRI QRLNELEAQT RVKLNYLDQI AKFWEIQGSS LKIPNVERRI LDLYSLSKIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGTTCCTC CGCTGTTGCA ATGAACTATT TTCCCTCAGT CGAGGGTGGC ACTTTTGAGT 60
AACCCCTTCC AAATAGAAAT CCATACCAGC CTATTTAGCT CAGTCTCCAC TATATGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0003677--F:DNA binding
GO:0032453--F:histone demethylase activity (H3-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001327	Ailuropoda melanoleuca	92.99	0.00e+00	2504.00
IUUC-Aca-004712	Anolis carolinensis	79.16	0.00e+00	1929.00
IUUC-Bta-013099	Bos taurus	91.44	0.00e+00	2435.00
IUUC-Bci-013992	Botrytis cinerea	35.99	2.00e-108	387.00
IUUC-Cfa-020954	Canis familiaris	92.81	0.00e+00	2441.00
IUUC-Cpo-021718	Cavia porcellus	96.66	0.00e+00	1343.00
IUUC-Csa-023946	Chlorocebus sabaeus	95.99	0.00e+00	2503.00
IUUC-Csv-026185	Ciona savignyi	44.15	0.00e+00	1090.00
IUUC-Dre-028238	Danio rerio	62.26	0.00e+00	1771.00
IUUC-Dno-029435	Dasypus novemcinctus	88.80	0.00e+00	2444.00
IUUC-Dor-030226	Dipodomys ordii	89.34	0.00e+00	1766.00
IUUC-Dse-031479	Dothistroma septosporum	29.84	8.00e-121	429.00
IUUC-Dme-032021	Drosophila melanogaster	45.54	0.00e+00	1068.00
IUUC-Eca-033834	Equus caballus	93.11	0.00e+00	2525.00
IUUC-Eeu-034692	Erinaceus europaeus	90.18	0.00e+00	1888.00
IUUC-Fca-035766	Felis catus	89.66	0.00e+00	2327.00
IUUC-Fox-037694	Fusarium oxysporum	31.59	2.00e-100	361.00
IUUC-Fso-038127	Fusarium solani	29.03	1.00e-109	392.00
IUUC-Gmo-039140	Gadus morhua	69.21	0.00e+00	1613.00
IUUC-Gac-041825	Gasterosteus aculeatus	66.74	0.00e+00	1708.00
IUUC-Ggo-045492	Gorilla gorilla	94.34	0.00e+00	2598.00
IUUC-Hsa-046737	Homo sapiens	94.27	0.00e+00	2581.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	94.08	0.00e+00	2597.00
IUUC-Lch-050517	Latimeria chalumnae	73.35	0.00e+00	2003.00
IUUC-Laf-054098	Loxodonta africana	85.25	0.00e+00	2190.00
IUUC-Mcc-055740	Macaca mulatta	93.95	0.00e+00	2584.00
IUUC-Meu-056643	Macropus eugenii	83.63	0.00e+00	2135.00
IUUC-Mmr-061032	Microcebus murinus	93.41	0.00e+00	2485.00
IUUC-Mdo-062754	Monodelphis domestica	79.78	0.00e+00	2057.00
IUUC-Mmu-063943	Mus musculus	91.63	0.00e+00	2519.00
IUUC-Mpu-066800	Mustela putorius furo	92.21	0.00e+00	2496.00
IUUC-Mlu-067109	Myotis lucifugus	91.87	0.00e+00	2466.00
IUUC-Nfi-068430	Neosartorya fischeri	32.09	8.00e-140	492.00
IUUC-Nle-069569	Nomascus leucogenys	97.23	0.00e+00	2521.00
IUUC-Ont-072274	Oreochromis niloticus	68.17	0.00e+00	1759.00
IUUC-Oan-073160	Ornithorhynchus anatinus	84.19	0.00e+00	2160.00
IUUC-Ocu-074440	Oryctolagus cuniculus	93.31	0.00e+00	2514.00
IUUC-Oin-079273	Oryza indica	37.84	1.00e-13	69.30
IUUC-Ola-087059	Oryzias latipes	68.23	0.00e+00	1795.00
IUUC-Oga-088191	Otolemur garnettii	92.82	0.00e+00	2536.00
IUUC-Oar-090027	Ovis aries	91.51	0.00e+00	2436.00
IUUC-Ptr-091415	Pan troglodytes	80.61	0.00e+00	2218.00
IUUC-Pan-091829	Papio anubis	93.50	0.00e+00	2571.00
IUUC-Pma-094137	Petromyzon marinus	51.56	0.00e+00	1337.00
IUUC-Pfo-096645	Poecilia formosa	64.12	0.00e+00	1733.00
IUUC-Pab-097582	Pongo abelii	93.77	0.00e+00	2309.00
IUUC-Pca-100446	Procavia capensis	88.67	0.00e+00	2429.00
IUUC-Pva-102553	Pteropus vampyrus	92.23	0.00e+00	1584.00
IUUC-Rno-105359	Rattus norvegicus	79.76	0.00e+00	2212.00
IUUC-Sha-106769	Sarcophilus harrisii	86.59	0.00e+00	2063.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.62	7.00e-120	426.00
IUUC-Sre-115161	Sporisorium reilianum	30.05	2.00e-128	455.00
IUUC-Ssc-116354	Sus scrofa	93.24	0.00e+00	2559.00
IUUC-Tru-117667	Takifugu rubripes	63.75	0.00e+00	1609.00
IUUC-Tni-119920	Tetraodon nigroviridis	64.37	0.00e+00	1736.00
IUUC-Tre-122213	Trichoderma reesei	32.27	4.00e-103	370.00
IUUC-Tbe-128040	Tupaia belangeri	98.01	0.00e+00	1063.00
IUUC-Ttr-128979	Tursiops truncatus	92.92	0.00e+00	2508.00
IUUC-Uma-129590	Ustilago maydis	29.68	9.00e-128	452.00
IUUC-Vpa-130433	Vicugna pacos	97.97	0.00e+00	1763.00
IUUC-Vvi-131071	Vitis vinifera	32.27	1.00e-84	308.00
IUUC-Xtr-132324	Xenopus tropicalis	70.95	0.00e+00	1809.00
IUUC-Xma-134315	Xiphophorus maculatus	64.72	0.00e+00	1773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence