iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076457

Ensembl Protein ID

OB03G44480.1

UniProt Accession

J3LTS2; J3LTS2_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G44480	OB03G44480.1	OB03G44480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.60e-09	37.0	143	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +++Ce+C +wfHp C++++ ++e ++ e+++C++C 
   Q: 143  FC-KCEMPYNPDNLMIQCEDCFDWFHPSCVGMT-DQEAKKLENFYCESCI 190
           78.7999999999********************.999999999******7 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAKTRQSQRR LLESFTIKGP DGVIKPGDCV LMKAPESSKK PYVARVEKIE ATRAQGTQVK 60
LKVRWYYRPE EVTDGRQIFH GSKEVFLSDH YDSQSVDTIE CKCYVHTIRK YTKLRSIGTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGA CGCGACAATC ACAAAGACGA TTGTTGGAGT CGTTCACCAT CAAGGGACCA 60
GATGGGGTCA TCAAGCGTGA GGAGCCTTTC TAACCCTTTT ATTTGTTTTT TGGCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005043	Anolis carolinensis	32.99	3.00e-11	63.50
IUUC-Ame-010945	Astyanax mexicanus	34.29	2.00e-10	60.80
IUUC-Csa-023515	Chlorocebus sabaeus	42.00	3.00e-10	60.10
IUUC-Cin-025225	Ciona intestinalis	37.50	2.00e-08	53.50
IUUC-Dre-028285	Danio rerio	44.00	2.00e-10	60.80
IUUC-Gmo-038789	Gadus morhua	31.96	9.00e-11	62.00
IUUC-Gac-041666	Gasterosteus aculeatus	28.87	6.00e-11	62.40
IUUC-Lpe-050759	Leersia perrieri	69.34	1.00e-82	298.00
IUUC-Lma-053190	Leptosphaeria maculans	31.88	2.00e-04	41.20
IUUC-Mcc-055658	Macaca mulatta	42.00	3.00e-10	60.10
IUUC-Mlu-067746	Myotis lucifugus	42.00	3.00e-10	60.10
IUUC-Nle-070143	Nomascus leucogenys	42.00	3.00e-10	60.10
IUUC-Ont-072257	Oreochromis niloticus	42.00	3.00e-10	60.10
IUUC-Oan-073654	Ornithorhynchus anatinus	42.00	4.00e-10	59.70
IUUC-Ocu-074417	Oryctolagus cuniculus	34.29	1.00e-10	61.60
IUUC-Oba-075975	Oryza barthii	80.95	3.00e-101	359.00
IUUC-Ogl-077326	Oryza glaberrima	80.95	3.00e-101	359.00
IUUC-Ogu-078224	Oryza glumaepatula	80.95	2.00e-101	360.00
IUUC-Oin-079199	Oryza indica	80.95	2.00e-101	360.00
IUUC-Olo-080695	Oryza longistaminata	80.48	8.00e-101	358.00
IUUC-Oni-082302	Oryza nivara	80.95	2.00e-101	360.00
IUUC-Opu-083906	Oryza punctata	80.48	1.00e-101	361.00
IUUC-Oru-085087	Oryza rufipogon	80.95	1.00e-101	360.00
IUUC-Osa-085343	Oryza sativa	80.95	1.00e-101	360.00
IUUC-Ola-087502	Oryzias latipes	30.68	2.00e-10	61.20
IUUC-Pan-092122	Papio anubis	42.00	3.00e-10	60.10
IUUC-Pno-094984	Phaeosphaeria nodorum	29.03	5.00e-04	40.00
IUUC-Pfo-096107	Poecilia formosa	29.17	3.00e-11	63.50
IUUC-Pva-102839	Pteropus vampyrus	30.11	2.00e-10	60.80
IUUC-Ssc-115645	Sus scrofa	42.00	3.00e-10	60.10
IUUC-Tru-118403	Takifugu rubripes	35.71	8.00e-11	62.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence