iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006172

Ensembl Protein ID

fgenesh1_pm.C_scaffold_1003508

UniProt Accession

D7KM34; D7KM34_ARALL

Genbank Protein ID

EFH68055.1

Protein Name

Ubiquitin-like protein ATG12

Genbank Nucleotide ID

GL348713

Gene Name

APG12; ARALYDRAFT_314728

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_1003508	fgenesh1_pm.C_scaffold_1003508	fgenesh1_pm.C_scaffold_1003508

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG12	43.18	7.00e-17	82.80	IUUC-Hsa-046903

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Functional Description
(View)

Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

Protein Sequence
(Fasta)

MAMESSSPGS VRKVVVHLRA TGGAPILKQS KFKIPGTDKF AKVIDFLRRQ LRSDSLFVYV 60
NSAFSPNPDE SVIDLYNNFG FDGKLVVNYA CSMAWG 96

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Nucleotide Sequence
(Fasta)

ATGGCGATGG AGTCGTCGTC CCCGGGCTCT GTTCGGAAAG GTTAGTCTTC GATTAATCGA 60
TGAAATTCGA CAATTGTATC AACGGAATCC ATGAATCAAT CGATTCAATT ACGTATATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom

Pfam

PF04110--APG12

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000045--P:autophagosome assembly

KEGG

aly:ARALYDRAFT_314728

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001177	Aegilops tauschii	74.12	3.00e-35	138.00
IUUC-Aml-002116	Ailuropoda melanoleuca	41.67	8.00e-18	82.40
IUUC-Atr-002615	Amborella trichopoda	82.98	1.00e-43	166.00
IUUC-Apl-003753	Anas platyrhynchos	55.00	1.00e-09	53.50
IUUC-Aca-005231	Anolis carolinensis	42.05	6.00e-14	68.90
IUUC-Ath-006953	Arabidopsis thaliana	88.30	6.00e-47	177.00
IUUC-Ago-007970	Ashbya gossypii	32.14	2.00e-05	41.20
IUUC-Acl-008072	Aspergillus clavatus	43.68	1.00e-14	70.90
IUUC-Afl-008725	Aspergillus flavus	43.68	7.00e-15	72.40
IUUC-Afu-008967	Aspergillus fumigatus	43.68	4.00e-14	70.10
IUUC-Ani-009248	Aspergillus nidulans	42.53	6.00e-14	69.70
IUUC-Ang-009684	Aspergillus niger	44.19	9.00e-14	68.90
IUUC-Aor-009947	Aspergillus oryzae	43.68	7.00e-15	72.40
IUUC-Ame-011656	Astyanax mexicanus	39.77	8.00e-15	71.60
IUUC-Bgr-012174	Blumeria graminis	44.94	4.00e-14	69.70
IUUC-Bta-012483	Bos taurus	43.18	5.00e-18	82.40
IUUC-Bci-013755	Botrytis cinerea	37.50	2.00e-10	57.00
IUUC-Bdi-014156	Brachypodium distachyon	70.65	1.00e-36	143.00
IUUC-Bol-015683	Brassica oleracea	92.47	8.00e-47	176.00
IUUC-Bra-016802	Brassica rapa	93.10	1.00e-44	169.00
IUUC-Cel-018242	Caenorhabditis elegans	34.07	7.00e-08	48.50
IUUC-Cja-019514	Callithrix jacchus	40.62	1.00e-17	82.00
IUUC-Cfa-020748	Canis familiaris	44.32	6.00e-18	82.80
IUUC-Cpo-021965	Cavia porcellus	41.67	6.00e-18	82.80
IUUC-Cre-023009	Chlamydomonas reinhardtii	50.59	4.00e-21	91.70
IUUC-Csa-023494	Chlorocebus sabaeus	40.62	4.00e-18	82.80
IUUC-Cho-024631	Choloepus hoffmanni	43.18	1.00e-17	82.00
IUUC-Cin-025609	Ciona intestinalis	49.43	1.00e-18	84.00
IUUC-Cgl-026722	Colletotrichum gloeosporioides	38.38	2.00e-12	64.30
IUUC-Dre-027479	Danio rerio	40.00	6.00e-16	75.10
IUUC-Dno-029693	Dasypus novemcinctus	37.50	5.00e-12	62.80
IUUC-Dse-031440	Dothistroma septosporum	37.76	4.00e-14	69.70
IUUC-Dme-031892	Drosophila melanogaster	32.67	3.00e-13	65.90
IUUC-Ete-032550	Echinops telfairi	45.12	4.00e-17	79.30
IUUC-Eca-033553	Equus caballus	40.62	4.00e-18	82.80
IUUC-Fca-036524	Felis catus	41.05	2.00e-17	80.90
IUUC-Fal-036942	Ficedula albicollis	41.86	5.00e-17	77.80
IUUC-Fox-037753	Fusarium oxysporum	45.45	1.00e-14	72.00
IUUC-Gmo-039498	Gadus morhua	40.91	8.00e-15	71.60
IUUC-Ggr-039852	Gaeumannomyces graminis	40.45	3.00e-11	60.80
IUUC-Gga-041263	Gallus gallus	43.18	1.00e-17	81.30
IUUC-Gac-042346	Gasterosteus aculeatus	41.67	1.00e-14	71.20
IUUC-Gma-042896	Glycine max	87.23	4.00e-45	171.00
IUUC-Ggo-045601	Gorilla gorilla	40.62	8.00e-18	82.40
IUUC-Hsa-046903	Homo sapiens	40.62	4.00e-18	83.20
IUUC-Hvu-047239	Hordeum vulgare	76.47	7.00e-36	140.00
IUUC-Itr-048445	Ictidomys tridecemlineatus	41.67	3.00e-18	83.60
IUUC-Kpa-049355	Komagataella pastoris	30.61	1.00e-10	57.80
IUUC-Lch-050619	Latimeria chalumnae	42.05	5.00e-17	79.30
IUUC-Lma-053299	Leptosphaeria maculans	34.94	6.00e-09	52.00
IUUC-Laf-054205	Loxodonta africana	42.00	4.00e-18	82.80
IUUC-Meu-056804	Macropus eugenii	44.32	4.00e-18	82.80
IUUC-Mor-057052	Magnaporthe oryzae	38.89	4.00e-11	60.50
IUUC-Mtr-057961	Medicago truncatula	90.22	1.00e-45	173.00
IUUC-Mla-059045	Melampsora laricipopulina	46.94	2.00e-23	99.80
IUUC-Mvi-060360	Microbotryum violaceum	52.87	3.00e-23	99.80
IUUC-Mmr-061654	Microcebus murinus	43.18	4.00e-18	82.80
IUUC-Mdo-062649	Monodelphis domestica	43.01	5.00e-18	82.40
IUUC-Mmu-064105	Mus musculus	43.01	3.00e-18	83.20
IUUC-Mac-065532	Musa acuminata	80.85	1.00e-42	162.00
IUUC-Mpu-066269	Mustela putorius furo	44.32	3.00e-18	83.20
IUUC-Mlu-067631	Myotis lucifugus	43.18	1.00e-17	81.60
IUUC-Nfi-068468	Neosartorya fischeri	43.68	2.00e-14	70.50
IUUC-Ncr-068750	Neurospora crassa	35.96	6.00e-11	59.30
IUUC-Nle-069483	Nomascus leucogenys	43.18	8.00e-18	82.40
IUUC-Opr-070936	Ochotona princeps	41.67	1.00e-17	82.00
IUUC-Obr-076322	Oryza brachyantha	75.29	1.00e-36	142.00
IUUC-Ogl-077226	Oryza glaberrima	75.00	5.00e-34	134.00
IUUC-Oin-079220	Oryza indica	73.44	1.00e-25	107.00
IUUC-Olo-080688	Oryza longistaminata	75.00	5.00e-34	134.00
IUUC-Ome-081265	Oryza meridionalis	75.00	5.00e-34	134.00
IUUC-Oru-084342	Oryza rufipogon	75.29	1.00e-35	142.00
IUUC-Osa-086212	Oryza sativa	75.00	5.00e-34	134.00
IUUC-Ola-087277	Oryzias latipes	38.54	1.00e-15	73.90
IUUC-Olu-087780	Ostreococcus lucimarinus	37.08	1.00e-12	63.90
IUUC-Oga-088175	Otolemur garnettii	40.62	3.00e-18	83.20
IUUC-Oar-089477	Ovis aries	43.18	1.00e-17	82.00
IUUC-Ptr-091129	Pan troglodytes	40.62	9.00e-18	82.40
IUUC-Psi-093351	Pelodiscus sinensis	41.67	7.00e-19	85.50
IUUC-Pno-094948	Phaeosphaeria nodorum	35.44	1.00e-08	51.20
IUUC-Ppa-095788	Physcomitrella patens	73.12	3.00e-37	145.00
IUUC-Pfo-096993	Poecilia formosa	36.84	5.00e-14	68.90
IUUC-Pab-098502	Pongo abelii	40.62	8.00e-18	82.40
IUUC-Pop-098819	Populus trichocarpa	72.34	5.00e-39	150.00
IUUC-Pca-100144	Procavia capensis	30.68	4.00e-07	47.00
IUUC-Ppe-101560	Prunus persica	90.24	9.00e-41	156.00
IUUC-Pva-102810	Pteropus vampyrus	37.68	9.00e-10	55.50
IUUC-Pgr-103531	Puccinia graminis	47.96	4.00e-23	99.00
IUUC-Ptt-103753	Puccinia triticina	51.72	1.00e-22	97.40
IUUC-Pyt-104733	Pyrenophora triticirepentis	43.02	2.00e-13	67.40
IUUC-Rno-106072	Rattus norvegicus	45.16	5.00e-19	85.90
IUUC-Sce-106275	Saccharomyces cerevisiae	33.33	1.00e-12	65.50
IUUC-Sha-107554	Sarcophilus harrisii	44.32	4.00e-18	82.80
IUUC-Sja-107682	Schizosaccharomyces japonicus	37.50	2.00e-13	67.40
IUUC-Spo-108275	Schizosaccharomyces pombe	40.91	4.00e-17	79.30
IUUC-Smo-109151	Selaginella moellendorffii	59.04	8.00e-26	107.00
IUUC-Sit-110270	Setaria italica	81.18	5.00e-38	147.00
IUUC-Sly-111862	Solanum lycopersicum	88.24	5.00e-42	160.00
IUUC-Stu-112663	Solanum tuberosum	95.12	1.00e-19	87.40
IUUC-Sbi-114148	Sorghum bicolor	81.18	5.00e-38	147.00
IUUC-Sre-115216	Sporisorium reilianum	43.88	6.00e-21	92.00
IUUC-Ssc-116051	Sus scrofa	40.62	4.00e-18	82.80
IUUC-Tru-118466	Takifugu rubripes	42.68	6.00e-15	70.90
IUUC-Tsy-119334	Tarsius syrichta	42.05	2.00e-13	67.80
IUUC-Tni-119792	Tetraodon nigroviridis	42.68	3.00e-15	72.00
IUUC-Tca-121861	Theobroma cacao	89.36	4.00e-47	178.00
IUUC-Tvi-122499	Trichoderma virens	46.59	3.00e-15	72.80
IUUC-Tae-123431	Triticum aestivum	74.12	3.00e-35	138.00
IUUC-Tme-126934	Tuber melanosporum	36.96	7.00e-13	65.90
IUUC-Ttr-129001	Tursiops truncatus	38.54	3.00e-13	67.40
IUUC-Uma-129324	Ustilago maydis	45.92	1.00e-21	94.40
IUUC-Vda-129846	Verticillium dahliae	42.05	2.00e-13	67.80
IUUC-Vpa-130202	Vicugna pacos	57.50	3.00e-10	57.40
IUUC-Vvi-131474	Vitis vinifera	85.71	1.00e-34	137.00
IUUC-Xtr-132782	Xenopus tropicalis	44.32	7.00e-18	82.00
IUUC-Xma-134140	Xiphophorus maculatus	37.89	1.00e-14	71.20
IUUC-Yli-134517	Yarrowia lipolytica	41.11	3.00e-13	67.40
IUUC-Zma-134764	Zea mays	81.18	5.00e-38	147.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence