iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115826

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU464138

Gene Name

TMF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000011510.2	ENSSSCT00000012597.2	ENSSSCP00000012268.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	88.21	0.00e+00	1590.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWAE TIPYGEPGIS PPVSGGWDTS 60
TWGLKSNTEP QSQPVASPKA ITKPVRRTVV DESENFFSAF LSPNDVQTIQ KSPVVSKPPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTGGT TCAATGCCTC CCAGCTGTCC AGCTTCGCCA AGCAGGCCCT GTCTCAGGCC 60
CAGAAGTCCA TCGACAGGGT CTTGGACATC CAGGAAGAGG AGCCGAGCGC CTGGGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0001675--P:acrosome assembly
GO:0071407--P:cellular response to organic cyclic compound
GO:0042742--P:defense response to bacterium
GO:0030317--P:flagellated sperm motility
GO:0033327--P:Leydig cell differentiation
GO:0032275--P:luteinizing hormone secretion
GO:0043066--P:negative regulation of apoptotic process
GO:0010629--P:negative regulation of gene expression
GO:0001819--P:positive regulation of cytokine production
GO:2000845--P:positive regulation of testosterone secretion
GO:0061136--P:regulation of proteasomal protein catabolic process
GO:0007289--P:spermatid nucleus differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	36.36	3.00e-11	64.30
IUUC-Aml-001448	Ailuropoda melanoleuca	88.05	0.00e+00	1603.00
IUUC-Atr-003092	Amborella trichopoda	31.62	2.00e-33	137.00
IUUC-Apl-003546	Anas platyrhynchos	69.97	0.00e+00	1175.00
IUUC-Aca-004234	Anolis carolinensis	66.67	0.00e+00	1166.00
IUUC-Ath-007364	Arabidopsis thaliana	29.79	1.00e-31	132.00
IUUC-Acl-008271	Aspergillus clavatus	28.68	1.00e-12	68.60
IUUC-Afl-008405	Aspergillus flavus	27.45	5.00e-08	53.10
IUUC-Afu-009059	Aspergillus fumigatus	28.68	4.00e-13	70.10
IUUC-Ani-009416	Aspergillus nidulans	28.39	1.00e-11	64.70
IUUC-Ang-009857	Aspergillus niger	28.17	4.00e-12	66.20
IUUC-Aor-009910	Aspergillus oryzae	27.45	5.00e-08	53.10
IUUC-Ate-010427	Aspergillus terreus	32.74	3.00e-09	57.40
IUUC-Ame-011270	Astyanax mexicanus	62.43	0.00e+00	775.00
IUUC-Bgr-012100	Blumeria graminis	29.46	2.00e-08	54.30
IUUC-Bta-012337	Bos taurus	88.78	0.00e+00	1581.00
IUUC-Bci-013775	Botrytis cinerea	24.96	2.00e-10	60.80
IUUC-Bdi-014582	Brachypodium distachyon	33.44	3.00e-17	84.00
IUUC-Cel-018635	Caenorhabditis elegans	34.15	1.10e-01	30.40
IUUC-Cja-019803	Callithrix jacchus	87.57	0.00e+00	1594.00
IUUC-Cfa-020451	Canis familiaris	87.83	0.00e+00	1566.00
IUUC-Cpo-021327	Cavia porcellus	84.98	0.00e+00	1429.00
IUUC-Cre-022628	Chlamydomonas reinhardtii	29.49	1.30e-02	35.00
IUUC-Csa-023803	Chlorocebus sabaeus	88.39	0.00e+00	1601.00
IUUC-Cho-024293	Choloepus hoffmanni	86.86	0.00e+00	697.00
IUUC-Cin-025461	Ciona intestinalis	40.92	1.00e-38	152.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	29.20	3.00e-09	57.40
IUUC-Cme-027311	Cyanidioschyzon merolae	32.45	1.00e-03	38.50
IUUC-Dre-028098	Danio rerio	56.46	0.00e+00	872.00
IUUC-Dno-029535	Dasypus novemcinctus	86.12	0.00e+00	1499.00
IUUC-Dor-031120	Dipodomys ordii	81.84	0.00e+00	1489.00
IUUC-Dse-031548	Dothistroma septosporum	31.80	2.00e-07	50.40
IUUC-Dme-031658	Drosophila melanogaster	30.85	3.00e-18	87.40
IUUC-Ete-032764	Echinops telfairi	75.49	0.00e+00	932.00
IUUC-Eca-034312	Equus caballus	88.87	0.00e+00	1568.00
IUUC-Eeu-034967	Erinaceus europaeus	75.69	0.00e+00	839.00
IUUC-Fca-036312	Felis catus	88.86	0.00e+00	1610.00
IUUC-Fal-036979	Ficedula albicollis	81.66	0.00e+00	723.00
IUUC-Fox-037833	Fusarium oxysporum	43.18	3.00e-06	47.40
IUUC-Gmo-039175	Gadus morhua	65.28	1.00e-179	622.00
IUUC-Ggr-039752	Gaeumannomyces graminis	32.74	6.00e-11	62.80
IUUC-Gga-041252	Gallus gallus	70.68	0.00e+00	1201.00
IUUC-Gac-042186	Gasterosteus aculeatus	66.67	1.00e-171	596.00
IUUC-Gma-042878	Glycine max	30.34	3.00e-25	110.00
IUUC-Ggo-045127	Gorilla gorilla	87.66	0.00e+00	1587.00
IUUC-Hsa-046889	Homo sapiens	88.21	0.00e+00	1600.00
IUUC-Hvu-047231	Hordeum vulgare	41.18	5.00e-10	60.10
IUUC-Itr-048895	Ictidomys tridecemlineatus	78.06	0.00e+00	1235.00
IUUC-Kpa-049375	Komagataella pastoris	34.65	1.00e-08	54.70
IUUC-Lch-049701	Latimeria chalumnae	65.11	0.00e+00	1115.00
IUUC-Lpe-051071	Leersia perrieri	30.51	2.00e-12	68.20
IUUC-Loc-052900	Lepisosteus oculatus	58.80	0.00e+00	980.00
IUUC-Lma-053189	Leptosphaeria maculans	26.16	9.00e-19	89.00
IUUC-Laf-054583	Loxodonta africana	84.46	0.00e+00	1455.00
IUUC-Meu-056215	Macropus eugenii	72.09	4.00e-107	382.00
IUUC-Mor-057227	Magnaporthe oryzae	27.06	6.00e-09	56.20
IUUC-Mpo-057315	Magnaporthe poae	42.31	4.00e-07	50.10
IUUC-Mtr-058276	Medicago truncatula	29.47	5.00e-19	90.10
IUUC-Mga-059916	Meleagris gallopavo	70.46	0.00e+00	1136.00
IUUC-Mmr-061789	Microcebus murinus	75.00	0.00e+00	1034.00
IUUC-Mdo-062174	Monodelphis domestica	76.22	0.00e+00	1328.00
IUUC-Mmu-063422	Mus musculus	80.67	0.00e+00	1355.00
IUUC-Mac-065498	Musa acuminata	28.29	1.00e-25	111.00
IUUC-Mpu-065744	Mustela putorius furo	87.67	0.00e+00	1631.00
IUUC-Mlu-066925	Myotis lucifugus	85.59	0.00e+00	1446.00
IUUC-Nfi-068254	Neosartorya fischeri	28.68	3.00e-13	70.90
IUUC-Ncr-068887	Neurospora crassa	26.81	3.00e-10	60.80
IUUC-Nle-070100	Nomascus leucogenys	88.12	0.00e+00	1597.00
IUUC-Opr-071131	Ochotona princeps	75.81	0.00e+00	987.00
IUUC-Ont-071378	Oreochromis niloticus	58.27	0.00e+00	862.00
IUUC-Oan-073705	Ornithorhynchus anatinus	75.05	0.00e+00	1354.00
IUUC-Ocu-074158	Oryctolagus cuniculus	85.79	0.00e+00	1549.00
IUUC-Oba-075498	Oryza barthii	31.79	5.00e-13	70.10
IUUC-Obr-076136	Oryza brachyantha	31.71	4.00e-26	113.00
IUUC-Ogl-077020	Oryza glaberrima	34.08	5.00e-19	90.10
IUUC-Ogu-078875	Oryza glumaepatula	31.79	4.00e-16	80.50
IUUC-Oin-079223	Oryza indica	34.08	6.00e-19	89.70
IUUC-Olo-080859	Oryza longistaminata	30.77	4.00e-11	63.90
IUUC-Ome-081621	Oryza meridionalis	30.51	4.00e-13	70.50
IUUC-Oni-082628	Oryza nivara	31.79	1.00e-12	68.90
IUUC-Opu-083825	Oryza punctata	31.79	1.00e-15	79.00
IUUC-Oru-084959	Oryza rufipogon	31.46	3.00e-12	67.40
IUUC-Osa-086104	Oryza sativa	34.08	5.00e-19	90.10
IUUC-Ola-087148	Oryzias latipes	60.55	0.00e+00	791.00
IUUC-Olu-087856	Ostreococcus lucimarinus	33.06	3.00e-15	77.00
IUUC-Oga-088598	Otolemur garnettii	85.39	0.00e+00	1535.00
IUUC-Oar-090450	Ovis aries	87.52	0.00e+00	1560.00
IUUC-Ptr-091659	Pan troglodytes	88.03	0.00e+00	1595.00
IUUC-Pan-091964	Papio anubis	71.61	0.00e+00	1217.00
IUUC-Psi-093585	Pelodiscus sinensis	72.22	0.00e+00	860.00
IUUC-Pma-094379	Petromyzon marinus	47.47	0.00e+00	647.00
IUUC-Pno-095032	Phaeosphaeria nodorum	28.83	2.00e-11	64.30
IUUC-Ppa-095425	Physcomitrella patens	32.24	1.00e-48	188.00
IUUC-Pfo-096386	Poecilia formosa	60.20	0.00e+00	750.00
IUUC-Pab-098042	Pongo abelii	80.58	0.00e+00	783.00
IUUC-Pop-099005	Populus trichocarpa	37.65	2.00e-14	73.60
IUUC-Pca-100308	Procavia capensis	84.17	0.00e+00	1042.00
IUUC-Ppe-101449	Prunus persica	31.14	9.00e-24	105.00
IUUC-Pva-103119	Pteropus vampyrus	80.07	0.00e+00	1047.00
IUUC-Pte-104335	Pyrenophora teres	26.32	4.00e-10	60.10
IUUC-Pyt-104547	Pyrenophora triticirepentis	27.27	6.00e-11	63.20
IUUC-Rno-105578	Rattus norvegicus	81.04	0.00e+00	1365.00
IUUC-Sha-106612	Sarcophilus harrisii	75.38	0.00e+00	1269.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	33.67	6.00e-03	35.40
IUUC-Spo-108059	Schizosaccharomyces pombe	29.46	2.00e-07	50.40
IUUC-Ssl-108390	Sclerotinia sclerotiorum	26.14	8.00e-14	72.40
IUUC-Smo-108781	Selaginella moellendorffii	29.64	3.00e-17	82.40
IUUC-Sit-109754	Setaria italica	33.76	2.00e-18	87.80
IUUC-Sly-111573	Solanum lycopersicum	29.90	4.00e-29	123.00
IUUC-Sar-113118	Sorex araneus	80.71	0.00e+00	1400.00
IUUC-Sbi-114519	Sorghum bicolor	32.80	1.00e-17	85.10
IUUC-Tgu-116702	Taeniopygia guttata	70.19	0.00e+00	1128.00
IUUC-Tru-117915	Takifugu rubripes	60.79	0.00e+00	724.00
IUUC-Tsy-119224	Tarsius syrichta	86.65	0.00e+00	1562.00
IUUC-Tni-120157	Tetraodon nigroviridis	56.40	0.00e+00	815.00
IUUC-Tca-121361	Theobroma cacao	29.79	2.00e-18	87.80
IUUC-Tre-122066	Trichoderma reesei	31.43	3.00e-09	57.00
IUUC-Tvi-122562	Trichoderma virens	32.29	5.00e-09	56.20
IUUC-Tae-123602	Triticum aestivum	33.12	5.00e-15	76.60
IUUC-Tme-126895	Tuber melanosporum	32.05	1.00e-07	52.00
IUUC-Tbe-128074	Tupaia belangeri	77.83	0.00e+00	1100.00
IUUC-Ttr-128190	Tursiops truncatus	88.85	0.00e+00	1622.00
IUUC-Vda-129710	Verticillium dahliae	30.97	4.00e-11	63.20
IUUC-Vpa-130072	Vicugna pacos	88.06	0.00e+00	1453.00
IUUC-Vvi-130853	Vitis vinifera	36.27	2.00e-08	54.70
IUUC-Xtr-131969	Xenopus tropicalis	61.08	0.00e+00	983.00
IUUC-Xma-133623	Xiphophorus maculatus	59.75	0.00e+00	786.00
IUUC-Yli-134550	Yarrowia lipolytica	25.21	1.00e-12	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence