iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076302

Ensembl Protein ID

OB01G21250.1

UniProt Accession

J3KYR9; J3KYR9_ORYBR

Protein Name

Presenilin

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G21250	OB01G21250.1	OB01G21250.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	30.71	1.00e-33	141.00	IUUC-Cel-018553

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza brachyantha

Functional Description
(View)

Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

Protein Sequence
(Fasta)

MRSTTSPRER EPGDRPASTS APRPSRTVAA AEGAPRARAG AGAAAPAPAR ARGAPSAAAT 60
VLDGLGAEVL AGLSPGSLSL GLVVLLISLL APPSSPGSAA AAPPPVTAAT LVYLESPNDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGAGCA CGACGAGCCC CAGGGAGAGG GAGCCGGGGG ACAGGCCCGC CAGCACCTCC 60
GCGCCGAGGC CGTCCAGGAC GGTCGCCGCC GCGGAGGGCG CCCCCCGCGC CCGCGCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0004190--F:aspartic-type endopeptidase activity
GO:0007219--P:Notch signaling pathway
GO:0016485--P:protein processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000686	Aegilops tauschii	75.76	2.00e-130	459.00
IUUC-Aml-001648	Ailuropoda melanoleuca	33.33	7.00e-35	140.00
IUUC-Atr-003039	Amborella trichopoda	54.21	5.00e-102	363.00
IUUC-Apl-003727	Anas platyrhynchos	32.18	1.00e-31	130.00
IUUC-Aca-005160	Anolis carolinensis	29.74	5.00e-26	111.00
IUUC-Aly-005455	Arabidopsis lyrata	51.28	1.00e-95	342.00
IUUC-Ath-006730	Arabidopsis thaliana	51.75	3.00e-99	354.00
IUUC-Ame-010686	Astyanax mexicanus	33.53	4.00e-26	111.00
IUUC-Bta-013097	Bos taurus	34.64	2.00e-25	109.00
IUUC-Bdi-014196	Brachypodium distachyon	80.34	4.00e-156	543.00
IUUC-Bol-015841	Brassica oleracea	53.04	1.00e-89	322.00
IUUC-Bra-017580	Brassica rapa	67.41	3.00e-42	164.00
IUUC-Cel-018553	Caenorhabditis elegans	33.63	3.00e-40	158.00
IUUC-Cja-018824	Callithrix jacchus	36.05	4.00e-25	108.00
IUUC-Cfa-020074	Canis familiaris	33.17	2.00e-32	132.00
IUUC-Cpo-021401	Cavia porcellus	35.20	2.00e-25	109.00
IUUC-Cre-022747	Chlamydomonas reinhardtii	41.88	8.00e-37	147.00
IUUC-Csa-023369	Chlorocebus sabaeus	35.75	5.00e-26	111.00
IUUC-Cho-024735	Choloepus hoffmanni	33.04	1.00e-29	123.00
IUUC-Cin-025780	Ciona intestinalis	32.60	1.00e-38	153.00
IUUC-Csv-025967	Ciona savignyi	38.62	8.00e-23	100.00
IUUC-Dre-028689	Danio rerio	31.51	3.00e-27	115.00
IUUC-Dno-029758	Dasypus novemcinctus	35.11	3.00e-34	138.00
IUUC-Dor-030609	Dipodomys ordii	55.56	4.00e-19	88.20
IUUC-Dme-031929	Drosophila melanogaster	34.73	2.00e-40	159.00
IUUC-Ete-032487	Echinops telfairi	33.21	3.00e-15	75.50
IUUC-Eca-034387	Equus caballus	34.64	4.00e-25	108.00
IUUC-Eeu-035134	Erinaceus europaeus	35.78	2.00e-30	125.00
IUUC-Fca-035396	Felis catus	34.64	2.00e-25	109.00
IUUC-Fal-036600	Ficedula albicollis	32.59	4.00e-33	134.00
IUUC-Gmo-039665	Gadus morhua	34.71	3.00e-21	95.50
IUUC-Gga-040706	Gallus gallus	30.94	1.00e-24	106.00
IUUC-Gac-042511	Gasterosteus aculeatus	32.61	1.00e-33	136.00
IUUC-Gma-043822	Glycine max	85.88	4.00e-40	157.00
IUUC-Ggo-045338	Gorilla gorilla	35.75	7.00e-26	110.00
IUUC-Hsa-046455	Homo sapiens	35.75	7.00e-26	110.00
IUUC-Hvu-047141	Hordeum vulgare	75.37	2.00e-137	481.00
IUUC-Itr-048731	Ictidomys tridecemlineatus	35.20	1.00e-25	109.00
IUUC-Lch-049946	Latimeria chalumnae	31.51	6.00e-20	91.30
IUUC-Lpe-051132	Leersia perrieri	90.58	1.00e-173	601.00
IUUC-Loc-052469	Lepisosteus oculatus	31.88	5.00e-31	128.00
IUUC-Laf-053758	Loxodonta africana	32.76	2.00e-26	112.00
IUUC-Mcc-054755	Macaca mulatta	35.75	7.00e-26	110.00
IUUC-Meu-056004	Macropus eugenii	32.54	4.00e-19	88.20
IUUC-Mtr-058392	Medicago truncatula	52.33	6.00e-94	337.00
IUUC-Mga-059466	Meleagris gallopavo	33.09	6.00e-34	137.00
IUUC-Mmr-060890	Microcebus murinus	34.64	6.00e-25	107.00
IUUC-Mdo-062122	Monodelphis domestica	32.14	5.00e-32	131.00
IUUC-Mmu-063823	Mus musculus	35.20	1.00e-25	109.00
IUUC-Mac-064858	Musa acuminata	68.15	2.00e-45	174.00
IUUC-Mpu-065927	Mustela putorius furo	33.00	1.00e-32	133.00
IUUC-Mlu-067079	Myotis lucifugus	33.50	3.00e-35	142.00
IUUC-Nle-069596	Nomascus leucogenys	35.75	6.00e-26	110.00
IUUC-Opr-070847	Ochotona princeps	33.93	5.00e-20	91.30
IUUC-Ont-071867	Oreochromis niloticus	34.52	5.00e-22	97.80
IUUC-Oan-072783	Ornithorhynchus anatinus	34.11	3.00e-29	121.00
IUUC-Ocu-074527	Oryctolagus cuniculus	33.83	5.00e-34	138.00
IUUC-Oba-075256	Oryza barthii	88.89	7.00e-154	535.00
IUUC-Ogl-077097	Oryza glaberrima	86.62	4.00e-166	576.00
IUUC-Ogu-078570	Oryza glumaepatula	89.18	1.00e-164	572.00
IUUC-Oin-079244	Oryza indica	86.20	1.00e-165	574.00
IUUC-Olo-080484	Oryza longistaminata	84.31	9.00e-119	418.00
IUUC-Ome-081814	Oryza meridionalis	88.79	1.00e-172	598.00
IUUC-Oni-082057	Oryza nivara	88.94	2.00e-164	571.00
IUUC-Opu-084176	Oryza punctata	87.74	6.00e-167	579.00
IUUC-Oru-084618	Oryza rufipogon	89.18	4.00e-165	573.00
IUUC-Osa-085602	Oryza sativa	89.02	4.00e-166	576.00
IUUC-Ola-086707	Oryzias latipes	33.33	2.00e-25	108.00
IUUC-Olu-087811	Ostreococcus lucimarinus	46.29	6.00e-38	150.00
IUUC-Oga-088560	Otolemur garnettii	32.57	5.00e-26	111.00
IUUC-Oar-089200	Ovis aries	34.64	2.00e-25	109.00
IUUC-Ptr-090569	Pan troglodytes	35.75	4.00e-25	108.00
IUUC-Pan-091742	Papio anubis	35.75	6.00e-26	110.00
IUUC-Psi-093505	Pelodiscus sinensis	32.76	3.00e-33	135.00
IUUC-Pma-094612	Petromyzon marinus	30.32	3.00e-21	95.50
IUUC-Ppa-095431	Physcomitrella patens	44.07	2.00e-84	305.00
IUUC-Pfo-097396	Poecilia formosa	31.58	1.00e-33	136.00
IUUC-Pab-098531	Pongo abelii	35.75	5.00e-26	111.00
IUUC-Pop-099661	Populus trichocarpa	46.38	7.00e-78	283.00
IUUC-Pca-101029	Procavia capensis	33.42	4.00e-31	128.00
IUUC-Ppe-101495	Prunus persica	51.82	1.00e-102	365.00
IUUC-Pva-102934	Pteropus vampyrus	32.40	3.00e-23	102.00
IUUC-Rno-106052	Rattus norvegicus	34.64	3.00e-25	108.00
IUUC-Sha-107045	Sarcophilus harrisii	31.23	1.00e-31	129.00
IUUC-Smo-109325	Selaginella moellendorffii	51.96	2.00e-35	142.00
IUUC-Sit-110624	Setaria italica	82.83	6.00e-153	533.00
IUUC-Sly-110865	Solanum lycopersicum	87.14	7.00e-33	131.00
IUUC-Stu-112433	Solanum tuberosum	53.08	7.00e-92	329.00
IUUC-Sar-113169	Sorex araneus	40.19	2.00e-19	89.40
IUUC-Sbi-114305	Sorghum bicolor	80.43	3.00e-156	543.00
IUUC-Ssc-115380	Sus scrofa	35.20	5.00e-28	117.00
IUUC-Tgu-116469	Taeniopygia guttata	32.62	2.00e-32	132.00
IUUC-Tru-117732	Takifugu rubripes	30.88	1.00e-28	120.00
IUUC-Tsy-119624	Tarsius syrichta	33.53	8.00e-20	90.50
IUUC-Tni-119852	Tetraodon nigroviridis	30.65	3.00e-27	115.00
IUUC-Tca-121865	Theobroma cacao	54.12	7.00e-100	356.00
IUUC-Tae-125925	Triticum aestivum	75.37	1.00e-141	494.00
IUUC-Tur-126237	Triticum urartu	76.13	4.00e-129	453.00
IUUC-Tbe-127632	Tupaia belangeri	35.75	6.00e-26	110.00
IUUC-Ttr-128793	Tursiops truncatus	32.53	1.00e-29	123.00
IUUC-Vpa-130625	Vicugna pacos	39.05	1.00e-18	87.00
IUUC-Vvi-131312	Vitis vinifera	52.38	1.00e-97	348.00
IUUC-Xtr-132756	Xenopus tropicalis	31.96	3.00e-33	135.00
IUUC-Xma-133377	Xiphophorus maculatus	32.96	4.00e-19	88.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence