iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099661

Ensembl Protein ID

POPTR_0015s06920.1

UniProt Accession

B9N053; B9N053_POPTR

Genbank Protein ID

ERP52204.1

Protein Name

Presenilin

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_1113048; POPTR_0015s06920g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s06920	POPTR_0015s06920.1	POPTR_0015s06920.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	31.75	1.00e-33	140.00	IUUC-Cel-018553

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Functional Description
(View)

Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

Protein Sequence
(Fasta)

MAQNRRPKSV LDSLGEELVR IITPVSICMF LVVVLVSILN TDSSSSASSI NTIATIAYNE 60
TTSDSFWDKF KGALINSLIF VAIITLVTFV LVILFYLRCT HFLKLYMGFS SFLVLGFMGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTATCATGT GGGAACTCCC CACCCAAAGA ACCAAAATGA CCTAATAAAA TTCGAGCTCT 60
ACCCTTCAAA ATTGAAAAAA TCCCAATTCA AATCAAATCA CAAACCTCAG AACCCGAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0005887--C:integral component of plasma membrane
GO:0005634--C:nucleus
GO:0004190--F:aspartic-type endopeptidase activity
GO:0004175--F:endopeptidase activity
GO:0007219--P:Notch signaling pathway
GO:0016485--P:protein processing

KEGG

pop:POPTR_0015s06920g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000686	Aegilops tauschii	53.54	8.00e-39	155.00
IUUC-Aml-001648	Ailuropoda melanoleuca	36.73	2.00e-30	125.00
IUUC-Atr-003039	Amborella trichopoda	57.33	2.00e-60	226.00
IUUC-Apl-003727	Anas platyrhynchos	36.93	7.00e-30	124.00
IUUC-Aca-005160	Anolis carolinensis	31.83	2.00e-34	139.00
IUUC-Aly-005455	Arabidopsis lyrata	55.56	9.00e-54	203.00
IUUC-Ath-006730	Arabidopsis thaliana	47.37	4.00e-88	317.00
IUUC-Aor-009995	Aspergillus oryzae	35.42	9.30e-01	25.80
IUUC-Ame-010686	Astyanax mexicanus	34.37	4.00e-35	141.00
IUUC-Bta-013026	Bos taurus	37.16	3.00e-30	125.00
IUUC-Bdi-014196	Brachypodium distachyon	47.15	3.00e-77	281.00
IUUC-Bol-015841	Brassica oleracea	49.88	7.00e-84	303.00
IUUC-Bra-017580	Brassica rapa	57.35	2.00e-40	159.00
IUUC-Cel-018553	Caenorhabditis elegans	34.90	4.00e-37	148.00
IUUC-Cja-019994	Callithrix jacchus	39.45	3.00e-31	129.00
IUUC-Cfa-020074	Canis familiaris	38.25	2.00e-31	129.00
IUUC-Cpo-022237	Cavia porcellus	38.65	5.00e-32	131.00
IUUC-Cre-022747	Chlamydomonas reinhardtii	45.65	1.00e-51	197.00
IUUC-Csa-023537	Chlorocebus sabaeus	39.44	3.00e-31	129.00
IUUC-Cho-024735	Choloepus hoffmanni	37.98	1.00e-29	124.00
IUUC-Cin-025780	Ciona intestinalis	32.84	2.00e-41	162.00
IUUC-Csv-025967	Ciona savignyi	32.28	1.00e-38	153.00
IUUC-Dre-028526	Danio rerio	34.62	1.00e-36	147.00
IUUC-Dno-029758	Dasypus novemcinctus	36.93	1.00e-28	120.00
IUUC-Dor-030609	Dipodomys ordii	39.33	8.00e-19	87.80
IUUC-Dme-031929	Drosophila melanogaster	33.81	3.00e-44	172.00
IUUC-Ete-032487	Echinops telfairi	37.85	4.00e-15	75.50
IUUC-Eca-034387	Equus caballus	31.47	5.00e-24	105.00
IUUC-Eeu-035134	Erinaceus europaeus	39.01	2.00e-31	129.00
IUUC-Fca-036243	Felis catus	38.33	3.00e-30	125.00
IUUC-Fal-036600	Ficedula albicollis	36.71	9.00e-30	124.00
IUUC-Gmo-039665	Gadus morhua	36.15	2.00e-25	109.00
IUUC-Gga-040706	Gallus gallus	32.42	2.00e-29	122.00
IUUC-Gac-042511	Gasterosteus aculeatus	32.99	3.00e-34	139.00
IUUC-Gma-043822	Glycine max	77.65	2.00e-33	136.00
IUUC-Ggo-045338	Gorilla gorilla	30.42	2.00e-24	106.00
IUUC-Hsa-046822	Homo sapiens	39.08	4.00e-31	128.00
IUUC-Hvu-047141	Hordeum vulgare	53.33	3.00e-40	159.00
IUUC-Itr-048420	Ictidomys tridecemlineatus	36.20	8.00e-32	130.00
IUUC-Lch-049638	Latimeria chalumnae	29.65	3.00e-28	119.00
IUUC-Lpe-051132	Leersia perrieri	59.71	3.00e-38	152.00
IUUC-Loc-052427	Lepisosteus oculatus	34.38	4.00e-40	158.00
IUUC-Laf-053758	Loxodonta africana	31.19	1.00e-33	137.00
IUUC-Mcc-055682	Macaca mulatta	39.08	4.00e-31	128.00
IUUC-Meu-056004	Macropus eugenii	42.72	3.00e-18	85.90
IUUC-Mtr-058392	Medicago truncatula	49.76	1.00e-79	290.00
IUUC-Mga-059466	Meleagris gallopavo	32.51	3.00e-30	125.00
IUUC-Mmr-060890	Microcebus murinus	30.42	5.00e-24	105.00
IUUC-Mdo-062122	Monodelphis domestica	37.15	2.00e-31	129.00
IUUC-Mmu-063176	Mus musculus	36.99	2.00e-28	119.00
IUUC-Mac-064858	Musa acuminata	52.42	5.00e-40	157.00
IUUC-Mpu-065927	Mustela putorius furo	37.54	1.00e-30	127.00
IUUC-Mlu-067079	Myotis lucifugus	33.25	2.00e-36	146.00
IUUC-Nle-070180	Nomascus leucogenys	39.08	4.00e-31	128.00
IUUC-Opr-070847	Ochotona princeps	36.07	4.00e-29	121.00
IUUC-Ont-071867	Oreochromis niloticus	34.79	5.00e-33	134.00
IUUC-Oan-072783	Ornithorhynchus anatinus	37.41	1.00e-28	120.00
IUUC-Ocu-074527	Oryctolagus cuniculus	37.50	1.00e-29	124.00
IUUC-Oba-075256	Oryza barthii	70.37	3.00e-35	142.00
IUUC-Obr-076302	Oryza brachyantha	58.52	2.00e-38	152.00
IUUC-Ogl-077097	Oryza glaberrima	45.71	4.00e-74	271.00
IUUC-Ogu-078570	Oryza glumaepatula	47.38	2.00e-71	262.00
IUUC-Oin-079244	Oryza indica	45.93	2.00e-74	272.00
IUUC-Olo-080484	Oryza longistaminata	46.21	2.00e-50	192.00
IUUC-Ome-081814	Oryza meridionalis	45.92	1.00e-73	270.00
IUUC-Oni-082057	Oryza nivara	47.66	1.00e-71	263.00
IUUC-Opu-084176	Oryza punctata	46.96	6.00e-72	264.00
IUUC-Oru-084618	Oryza rufipogon	47.66	1.00e-71	263.00
IUUC-Osa-085602	Oryza sativa	47.64	9.00e-73	266.00
IUUC-Ola-086707	Oryzias latipes	31.56	6.00e-23	100.00
IUUC-Olu-087811	Ostreococcus lucimarinus	40.16	3.00e-65	241.00
IUUC-Oga-088560	Otolemur garnettii	30.42	2.00e-24	106.00
IUUC-Oar-090348	Ovis aries	33.00	4.00e-32	132.00
IUUC-Ptr-091060	Pan troglodytes	39.08	4.00e-31	128.00
IUUC-Pan-091855	Papio anubis	39.30	2.00e-28	119.00
IUUC-Psi-093505	Pelodiscus sinensis	37.06	7.00e-30	124.00
IUUC-Pma-094612	Petromyzon marinus	37.96	2.00e-30	126.00
IUUC-Ppa-095431	Physcomitrella patens	61.84	6.00e-70	257.00
IUUC-Pfo-097396	Poecilia formosa	31.95	1.00e-33	136.00
IUUC-Pab-098591	Pongo abelii	39.08	3.00e-31	129.00
IUUC-Pca-101029	Procavia capensis	37.97	7.00e-30	124.00
IUUC-Ppe-101495	Prunus persica	48.37	9.00e-93	333.00
IUUC-Pva-102244	Pteropus vampyrus	31.58	4.00e-31	128.00
IUUC-Rno-105861	Rattus norvegicus	39.36	7.00e-29	121.00
IUUC-Sha-106876	Sarcophilus harrisii	32.74	1.00e-32	134.00
IUUC-Smo-109325	Selaginella moellendorffii	49.63	4.00e-73	267.00
IUUC-Sit-110624	Setaria italica	53.98	1.00e-35	143.00
IUUC-Sly-110865	Solanum lycopersicum	75.71	3.00e-25	106.00
IUUC-Stu-112433	Solanum tuberosum	51.18	9.00e-84	303.00
IUUC-Sar-113169	Sorex araneus	38.81	7.00e-30	124.00
IUUC-Sbi-114305	Sorghum bicolor	47.93	5.00e-71	261.00
IUUC-Ssc-115766	Sus scrofa	37.23	7.00e-31	127.00
IUUC-Tgu-116469	Taeniopygia guttata	36.71	8.00e-30	123.00
IUUC-Tru-117732	Takifugu rubripes	31.95	2.00e-28	119.00
IUUC-Tsy-119624	Tarsius syrichta	36.21	1.00e-28	120.00
IUUC-Tni-119852	Tetraodon nigroviridis	32.44	3.00e-28	119.00
IUUC-Tca-121865	Theobroma cacao	50.25	5.00e-88	317.00
IUUC-Tae-123984	Triticum aestivum	53.78	2.00e-39	155.00
IUUC-Tur-126237	Triticum urartu	80.23	3.00e-34	139.00
IUUC-Tbe-127632	Tupaia belangeri	30.42	2.00e-24	106.00
IUUC-Ttr-128793	Tursiops truncatus	37.28	3.00e-28	119.00
IUUC-Vpa-130625	Vicugna pacos	35.34	3.00e-26	112.00
IUUC-Vvi-131312	Vitis vinifera	49.63	3.00e-85	308.00
IUUC-Xtr-132756	Xenopus tropicalis	33.42	8.00e-34	137.00
IUUC-Xma-133377	Xiphophorus maculatus	32.02	4.00e-33	135.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence