iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121480

Ensembl Protein ID

EOY08709

UniProt Accession

A0A061F2J2; A0A061F2J2_THECC

Genbank Protein ID

EOY08709.1

Protein Name

RING-H2 finger C1A, putative

Genbank Nucleotide ID

CM001883

Gene Name

TCM_023780

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_023780	EOY08709	EOY08709

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.7	186	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ f   ++  + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 186  CPVCKDKFelgSE-ARQMPCNHIYHSDCIIPW------LEQHNSCPVCR 227
           ********77544.999***************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSTGRNTHWC YRCRRPVLLQ GRDAVCCYCR GGFVQELDDM VHISPLDFFG LDGDEDRIQR 60
FGLMDAFSAL MRQRLADRNF NHNIRGRTDS IPENTSPFGP LLIFGGQIPF RLSGNGGFEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCAAAGTC AGCAGGCTGA GCGGGTGAGC CCAACTAGCT TCGGCGTCAG CCCAAATAAA 60
TATCAGTACC ACCACGTGTA ATTTGGGATA AACGATAAAT ACGGATTTTC TTTTTAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	52.73	7.00e-70	256.00
IUUC-Aml-002001	Ailuropoda melanoleuca	46.15	3.00e-25	108.00
IUUC-Atr-002522	Amborella trichopoda	53.81	5.00e-51	192.00
IUUC-Apl-003778	Anas platyrhynchos	44.64	6.00e-27	113.00
IUUC-Aca-004365	Anolis carolinensis	42.53	6.00e-22	95.10
IUUC-Aly-006495	Arabidopsis lyrata	66.81	8.00e-82	296.00
IUUC-Ath-006961	Arabidopsis thaliana	66.26	8.00e-84	302.00
IUUC-Ame-010626	Astyanax mexicanus	46.15	4.00e-26	111.00
IUUC-Bta-012808	Bos taurus	48.08	3.00e-26	111.00
IUUC-Bdi-014137	Brachypodium distachyon	54.45	2.00e-81	294.00
IUUC-Bol-016039	Brassica oleracea	54.52	8.00e-81	292.00
IUUC-Bra-017780	Brassica rapa	53.94	6.00e-72	263.00
IUUC-Cja-019575	Callithrix jacchus	48.08	1.00e-26	112.00
IUUC-Cfa-020142	Canis familiaris	46.15	2.00e-25	108.00
IUUC-Cpo-022451	Cavia porcellus	49.04	1.00e-26	113.00
IUUC-Csa-023433	Chlorocebus sabaeus	48.08	1.00e-26	112.00
IUUC-Cho-024643	Choloepus hoffmanni	42.11	2.00e-24	105.00
IUUC-Cne-026837	Cryptococcus neoformans	37.23	1.00e-19	90.50
IUUC-Dre-027515	Danio rerio	44.64	5.00e-26	110.00
IUUC-Dno-029349	Dasypus novemcinctus	48.08	1.00e-26	112.00
IUUC-Dor-030103	Dipodomys ordii	48.08	1.00e-26	112.00
IUUC-Dme-031601	Drosophila melanogaster	38.32	2.00e-21	96.30
IUUC-Ete-032392	Echinops telfairi	39.47	2.00e-22	99.00
IUUC-Eca-034240	Equus caballus	47.12	4.00e-26	110.00
IUUC-Fal-037027	Ficedula albicollis	44.64	1.00e-26	112.00
IUUC-Gmo-038515	Gadus morhua	44.14	3.00e-26	111.00
IUUC-Gga-040682	Gallus gallus	46.15	3.00e-26	111.00
IUUC-Gac-041369	Gasterosteus aculeatus	47.12	1.00e-26	112.00
IUUC-Gma-043643	Glycine max	68.67	1.00e-114	405.00
IUUC-Ggo-044873	Gorilla gorilla	42.11	1.00e-24	105.00
IUUC-Hsa-046723	Homo sapiens	48.08	3.00e-26	111.00
IUUC-Hvu-047602	Hordeum vulgare	51.60	3.00e-74	270.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	48.08	7.00e-27	113.00
IUUC-Lch-050071	Latimeria chalumnae	46.15	1.00e-25	109.00
IUUC-Lpe-051427	Leersia perrieri	54.12	1.00e-70	258.00
IUUC-Loc-052470	Lepisosteus oculatus	46.88	5.00e-27	113.00
IUUC-Laf-054384	Loxodonta africana	37.21	4.00e-23	100.00
IUUC-Mcc-055739	Macaca mulatta	48.08	3.00e-26	111.00
IUUC-Meu-056635	Macropus eugenii	43.27	3.00e-25	107.00
IUUC-Mtr-057711	Medicago truncatula	53.50	1.00e-81	295.00
IUUC-Mla-058832	Melampsora laricipopulina	42.86	9.00e-16	75.50
IUUC-Mga-059349	Meleagris gallopavo	46.15	2.00e-26	112.00
IUUC-Mmr-060653	Microcebus murinus	48.08	2.00e-26	112.00
IUUC-Mdo-062442	Monodelphis domestica	48.08	1.00e-26	112.00
IUUC-Mmu-064148	Mus musculus	47.12	4.00e-26	111.00
IUUC-Mac-065133	Musa acuminata	44.66	6.00e-67	246.00
IUUC-Mpu-065917	Mustela putorius furo	46.15	2.00e-25	108.00
IUUC-Mlu-067495	Myotis lucifugus	49.04	2.00e-27	115.00
IUUC-Nle-069274	Nomascus leucogenys	48.08	2.00e-26	111.00
IUUC-Opr-070812	Ochotona princeps	43.27	4.00e-24	104.00
IUUC-Ont-071505	Oreochromis niloticus	47.12	1.00e-26	113.00
IUUC-Oan-073225	Ornithorhynchus anatinus	46.15	6.00e-26	110.00
IUUC-Ocu-074691	Oryctolagus cuniculus	43.27	3.00e-24	104.00
IUUC-Oba-075047	Oryza barthii	54.64	1.00e-79	288.00
IUUC-Obr-076829	Oryza brachyantha	53.93	3.00e-79	287.00
IUUC-Ogl-077378	Oryza glaberrima	54.29	6.00e-79	286.00
IUUC-Ogu-078709	Oryza glumaepatula	55.00	2.00e-79	288.00
IUUC-Oin-079400	Oryza indica	36.56	3.00e-44	171.00
IUUC-Olo-080762	Oryza longistaminata	54.64	1.00e-79	288.00
IUUC-Ome-081717	Oryza meridionalis	42.07	2.00e-62	232.00
IUUC-Oni-083090	Oryza nivara	55.00	2.00e-79	288.00
IUUC-Opu-083898	Oryza punctata	54.29	8.00e-79	285.00
IUUC-Oru-084267	Oryza rufipogon	55.00	2.00e-79	288.00
IUUC-Osa-086229	Oryza sativa	55.00	2.00e-79	288.00
IUUC-Ola-086315	Oryzias latipes	46.15	5.00e-26	110.00
IUUC-Oga-088067	Otolemur garnettii	48.08	1.00e-26	112.00
IUUC-Oar-089999	Ovis aries	36.31	2.00e-24	105.00
IUUC-Ptr-091473	Pan troglodytes	42.11	1.00e-24	105.00
IUUC-Pan-092424	Papio anubis	48.08	3.00e-26	111.00
IUUC-Psi-093171	Pelodiscus sinensis	47.12	1.00e-26	112.00
IUUC-Pma-094408	Petromyzon marinus	49.04	5.00e-26	110.00
IUUC-Pfo-097402	Poecilia formosa	45.19	2.00e-25	108.00
IUUC-Pab-098466	Pongo abelii	42.11	1.00e-24	105.00
IUUC-Pop-099462	Populus trichocarpa	72.44	4.00e-115	406.00
IUUC-Pca-100442	Procavia capensis	49.04	6.00e-27	113.00
IUUC-Ppe-101324	Prunus persica	67.59	5.00e-102	363.00
IUUC-Pva-103240	Pteropus vampyrus	48.08	4.00e-26	111.00
IUUC-Rno-105203	Rattus norvegicus	47.12	5.00e-26	110.00
IUUC-Sha-107638	Sarcophilus harrisii	45.54	4.00e-27	114.00
IUUC-Sit-110648	Setaria italica	53.02	3.00e-79	287.00
IUUC-Sly-111407	Solanum lycopersicum	51.56	9.00e-76	276.00
IUUC-Stu-112467	Solanum tuberosum	53.12	2.00e-76	278.00
IUUC-Sbi-114297	Sorghum bicolor	53.38	6.00e-80	289.00
IUUC-Ssc-115917	Sus scrofa	29.02	2.00e-25	108.00
IUUC-Tgu-117502	Taeniopygia guttata	47.12	3.00e-26	111.00
IUUC-Tru-117681	Takifugu rubripes	42.34	7.00e-25	106.00
IUUC-Tsy-119630	Tarsius syrichta	42.31	9.00e-23	99.80
IUUC-Tni-120265	Tetraodon nigroviridis	31.60	1.00e-25	108.00
IUUC-Tae-124679	Triticum aestivum	52.67	2.00e-77	281.00
IUUC-Tur-125986	Triticum urartu	48.33	6.00e-60	224.00
IUUC-Ttr-128843	Tursiops truncatus	49.04	2.00e-26	111.00
IUUC-Vpa-130755	Vicugna pacos	43.27	2.00e-24	105.00
IUUC-Vvi-131335	Vitis vinifera	69.52	3.00e-114	403.00
IUUC-Xtr-132815	Xenopus tropicalis	28.52	5.00e-28	117.00
IUUC-Xma-133481	Xiphophorus maculatus	45.19	2.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence