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Tag Content
iUUCD ID IUUC-Cja-019587
Ensembl Protein ID ENSCJAP00000037264.2
UniProt Accession F6VHN0; F6VHN0_CALJA
Genbank Protein ID ENSCJAP00000037264
Protein Name Ubiquitin-related modifier 1
Genbank Nucleotide ID ACFV01119925
Gene Name URM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCJAG00000020036.3 ENSCJAT00000039363.2 ENSCJAP00000037264.2
ENSCJAG00000020036.3 ENSCJAT00000039361.3 ENSCJAP00000037262.3
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 42.42 4.00e-17 80.50 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Callithrix jacchus
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as MOCS3, ATPBD3, CTU2, USP15 and CAS. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as MOCS3, ATPBD3, CTU2, USP15 and CAS. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MAAPLSVEVE FGGGAELLFD GVKKHQVTLP GQEEPWDIRN LLVWIKKNLL KERPELFIQG 60
DSVRPGILVL INDADWELLG ELDYQLQDQD SVLFISTLHG G 101
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Protein Fasta Sequence


>IUUC-Cja-019587|ULD,UBQ_Other|Callithrix jacchus
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Nucleotide Sequence
(Fasta)
GGAAATTTGT GGGCGCGCCG GAAGTTGAGG AGAGTTTCCT GCGAGCTCGG CTTCCTCAAC 60
ATGGCAGCGC CCTTGTCAGT GGAGGTGGAG TTCGGGTGAG TTACAGAGCT GGGGCGCCGT 120
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Nucleotide Fasta Sequence


>IUUC-Cja-019587|ULD,UBQ_Other|Callithrix jacchus
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 98.02 8.00e-54 201.00
IUUC-Atr-003089 Amborella trichopoda 57.58 2.00e-30 123.00
IUUC-Apl-003382 Anas platyrhynchos 89.01 1.00e-43 166.00
IUUC-Aca-004981 Anolis carolinensis 83.17 6.00e-48 181.00
IUUC-Aly-005517 Arabidopsis lyrata 54.35 2.00e-27 113.00
IUUC-Ath-006718 Arabidopsis thaliana 54.76 4.00e-24 102.00
IUUC-Ago-007917 Ashbya gossypii 43.43 4.00e-20 89.00
IUUC-Acl-008054 Aspergillus clavatus 66.00 4.00e-15 72.40
IUUC-Afl-008704 Aspergillus flavus 55.06 1.00e-20 90.50
IUUC-Aor-009890 Aspergillus oryzae 57.43 3.00e-25 106.00
IUUC-Bta-012448 Bos taurus 98.02 2.00e-53 199.00
IUUC-Bci-013865 Botrytis cinerea 46.53 1.00e-21 94.00
IUUC-Bdi-014980 Brachypodium distachyon 63.64 2.00e-24 103.00
IUUC-Bol-016055 Brassica oleracea 53.75 1.00e-23 100.00
IUUC-Bra-016845 Brassica rapa 53.75 1.00e-23 100.00
IUUC-Cel-018485 Caenorhabditis elegans 33.98 1.00e-11 61.20
IUUC-Cfa-020653 Canis familiaris 97.03 3.00e-53 199.00
IUUC-Cpo-021622 Cavia porcellus 100.00 4.00e-54 202.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 53.06 1.00e-25 107.00
IUUC-Csa-023756 Chlorocebus sabaeus 98.73 5.00e-41 159.00
IUUC-Cgl-026518 Colletotrichum gloeosporioides 45.54 6.00e-21 92.00
IUUC-Cne-026953 Cryptococcus neoformans 56.31 9.00e-28 115.00
IUUC-Cme-027314 Cyanidioschyzon merolae 41.67 8.00e-18 81.30
IUUC-Dre-027884 Danio rerio 78.22 1.00e-44 170.00
IUUC-Dno-029262 Dasypus novemcinctus 93.83 1.00e-39 155.00
IUUC-Dor-030601 Dipodomys ordii 67.33 3.00e-28 115.00
IUUC-Dme-031893 Drosophila melanogaster 63.73 1.00e-32 130.00
IUUC-Ete-032773 Echinops telfairi 92.08 2.00e-48 183.00
IUUC-Eca-034187 Equus caballus 99.01 5.00e-54 201.00
IUUC-Eeu-034808 Erinaceus europaeus 94.06 3.00e-52 196.00
IUUC-Fca-036107 Felis catus 96.04 3.00e-53 199.00
IUUC-Fal-036607 Ficedula albicollis 87.91 4.00e-43 165.00
IUUC-Fox-037698 Fusarium oxysporum 47.12 4.00e-23 99.00
IUUC-Gmo-039492 Gadus morhua 76.24 6.00e-44 168.00
IUUC-Ggr-039965 Gaeumannomyces graminis 48.08 1.00e-20 92.00
IUUC-Gga-041268 Gallus gallus 88.12 5.00e-49 185.00
IUUC-Gac-042111 Gasterosteus aculeatus 80.20 2.00e-46 176.00
IUUC-Gma-043240 Glycine max 53.57 6.00e-23 98.20
IUUC-Ggo-045176 Gorilla gorilla 96.20 3.00e-32 130.00
IUUC-Hsa-046077 Homo sapiens 97.03 3.00e-45 172.00
IUUC-Itr-048111 Ictidomys tridecemlineatus 97.75 1.00e-38 150.00
IUUC-Kpa-049157 Komagataella pastoris 48.48 5.00e-20 88.60
IUUC-Lch-049889 Latimeria chalumnae 79.21 1.00e-45 174.00
IUUC-Lpe-050783 Leersia perrieri 57.83 6.00e-23 98.60
IUUC-Loc-052400 Lepisosteus oculatus 79.21 3.00e-45 172.00
IUUC-Lma-053259 Leptosphaeria maculans 45.54 7.00e-21 92.00
IUUC-Laf-053596 Loxodonta africana 97.09 3.00e-52 196.00
IUUC-Mcc-054845 Macaca mulatta 92.86 1.00e-47 180.00
IUUC-Meu-055968 Macropus eugenii 92.08 2.00e-51 192.00
IUUC-Mor-057126 Magnaporthe oryzae 46.15 2.00e-19 87.40
IUUC-Mpo-057311 Magnaporthe poae 49.50 1.00e-21 95.50
IUUC-Mtr-058266 Medicago truncatula 51.16 1.00e-22 97.40
IUUC-Mla-058847 Melampsora laricipopulina 40.78 2.00e-12 63.90
IUUC-Mga-059468 Meleagris gallopavo 89.01 1.00e-43 167.00
IUUC-Mvi-060235 Microbotryum violaceum 35.76 3.00e-19 87.40
IUUC-Mdo-061948 Monodelphis domestica 91.09 3.00e-51 192.00
IUUC-Mmu-063946 Mus musculus 96.04 1.00e-52 197.00
IUUC-Mac-064812 Musa acuminata 59.52 6.00e-25 105.00
IUUC-Mpu-066763 Mustela putorius furo 97.03 2.00e-52 196.00
IUUC-Mlu-066970 Myotis lucifugus 100.00 4.00e-41 158.00
IUUC-Ncr-068824 Neurospora crassa 44.55 1.00e-19 87.80
IUUC-Nle-069849 Nomascus leucogenys 97.47 2.00e-40 157.00
IUUC-Opr-070227 Ochotona princeps 100.00 4.00e-54 202.00
IUUC-Ont-072530 Oreochromis niloticus 81.19 2.00e-46 176.00
IUUC-Oan-073191 Ornithorhynchus anatinus 81.44 5.00e-42 161.00
IUUC-Ocu-074460 Oryctolagus cuniculus 96.94 2.00e-51 192.00
IUUC-Oba-075499 Oryza barthii 67.19 1.00e-22 99.00
IUUC-Obr-076896 Oryza brachyantha 57.50 6.00e-22 97.10
IUUC-Ogl-077834 Oryza glaberrima 67.19 3.00e-23 99.40
IUUC-Ogu-078622 Oryza glumaepatula 67.19 3.00e-23 99.40
IUUC-Oin-079358 Oryza indica 67.19 1.00e-22 99.40
IUUC-Olo-081035 Oryza longistaminata 51.46 1.00e-23 102.00
IUUC-Oni-082425 Oryza nivara 67.19 3.00e-23 99.40
IUUC-Opu-083461 Oryza punctata 66.67 2.00e-22 97.80
IUUC-Oru-084875 Oryza rufipogon 60.56 4.00e-21 92.00
IUUC-Oga-089128 Otolemur garnettii 98.02 1.00e-53 200.00
IUUC-Oar-089896 Ovis aries 98.02 2.00e-53 199.00
IUUC-Ptr-091618 Pan troglodytes 96.20 3.00e-32 130.00
IUUC-Pan-092238 Papio anubis 98.73 5.00e-41 159.00
IUUC-Psi-093879 Pelodiscus sinensis 86.14 3.00e-48 182.00
IUUC-Pma-094484 Petromyzon marinus 81.19 7.00e-36 141.00
IUUC-Ppa-095801 Physcomitrella patens 58.02 1.00e-22 97.10
IUUC-Pfo-097192 Poecilia formosa 80.20 4.00e-46 175.00
IUUC-Pab-098203 Pongo abelii 96.04 7.00e-45 171.00
IUUC-Pop-099614 Populus trichocarpa 57.14 5.00e-24 102.00
IUUC-Pca-100507 Procavia capensis 98.73 5.00e-41 158.00
IUUC-Ppe-101174 Prunus persica 55.56 9.00e-29 117.00
IUUC-Pva-102735 Pteropus vampyrus 98.02 3.00e-50 189.00
IUUC-Pgr-103510 Puccinia graminis 39.81 3.00e-12 63.50
IUUC-Ptt-103918 Puccinia triticina 35.92 2.00e-10 57.00
IUUC-Pte-104173 Pyrenophora teres 47.57 4.00e-23 99.40
IUUC-Pyt-104806 Pyrenophora triticirepentis 47.57 4.00e-23 99.00
IUUC-Rno-105820 Rattus norvegicus 97.03 4.00e-53 198.00
IUUC-Sce-106366 Saccharomyces cerevisiae 42.42 1.00e-17 80.50
IUUC-Sja-107727 Schizosaccharomyces japonicus 41.67 2.00e-16 77.40
IUUC-Spo-108074 Schizosaccharomyces pombe 39.80 1.00e-09 54.30
IUUC-Smo-108944 Selaginella moellendorffii 61.80 1.00e-26 110.00
IUUC-Sit-110277 Setaria italica 57.14 6.00e-24 101.00
IUUC-Sly-111505 Solanum lycopersicum 54.76 2.00e-24 103.00
IUUC-Stu-112076 Solanum tuberosum 55.95 6.00e-25 105.00
IUUC-Sbi-114274 Sorghum bicolor 58.44 6.00e-24 102.00
IUUC-Sre-114953 Sporisorium reilianum 59.80 9.00e-28 114.00
IUUC-Ssc-115418 Sus scrofa 97.03 2.00e-53 199.00
IUUC-Tgu-117311 Taeniopygia guttata 87.91 5.00e-43 164.00
IUUC-Tru-118598 Takifugu rubripes 83.15 9.00e-41 157.00
IUUC-Tni-120109 Tetraodon nigroviridis 78.43 3.00e-43 166.00
IUUC-Tca-120942 Theobroma cacao 55.42 3.00e-23 99.40
IUUC-Tre-122099 Trichoderma reesei 47.87 6.00e-16 75.10
IUUC-Tvi-122285 Trichoderma virens 51.92 9.00e-21 91.70
IUUC-Tae-125193 Triticum aestivum 57.83 2.00e-23 99.80
IUUC-Tur-126677 Triticum urartu 50.53 8.00e-21 91.70
IUUC-Tme-127120 Tuber melanosporum 48.08 5.00e-24 102.00
IUUC-Tbe-128050 Tupaia belangeri 72.28 5.00e-34 135.00
IUUC-Ttr-129019 Tursiops truncatus 95.05 2.00e-50 189.00
IUUC-Uma-129483 Ustilago maydis 57.84 1.00e-25 107.00
IUUC-Vda-129690 Verticillium dahliae 41.07 1.00e-16 77.80
IUUC-Vvi-131174 Vitis vinifera 56.63 3.00e-24 102.00
IUUC-Xma-133862 Xiphophorus maculatus 80.20 4.00e-46 175.00
IUUC-Yli-134398 Yarrowia lipolytica 46.46 3.00e-19 86.30
IUUC-Zma-134964 Zea mays 59.76 9.00e-23 97.80
Created Date 25-Jun-2017

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