iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
circBase	microRNA	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.20e-11	43.5	382	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCp 49
            C +C ++++++ ++v C++C++ fH  C++l+   +lp+ + wiC 
   Q: 382  LCSICNKPEKED-EIVFCDRCDRGFHTYCVGLK---KLPQGT-WICD 423
           7*********88.5*******************...*****6.***6 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MEDPVISEES NISSSETPAT PTDSQEAASS QPAPISSRRE TVNRNVYIML DVNHRKVEPK 60
DIIEYEWPVK SGDRWFLQEQ IGELLDIKSF SRKYPDFTRR KVNHEEREFL EWNFNVHKLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGATC CAGTTATCAG CGAAGAGAGT AATATTTCAT CGTCAGAAAC CCCGGCAACT 60
CCAACAGACA GCCAAGAGGC AGCTTCCAGT CAACCGGCTC CAATTTCATC GCGACGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cel:CELE_F33E11.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001967	Ailuropoda melanoleuca	31.90	7.00e-61	226.00
IUUC-Apl-003184	Anas platyrhynchos	32.87	1.00e-58	219.00
IUUC-Aca-005357	Anolis carolinensis	33.65	2.00e-62	232.00
IUUC-Acl-008371	Aspergillus clavatus	37.04	2.00e-08	52.80
IUUC-Afu-008965	Aspergillus fumigatus	42.22	1.00e-08	53.50
IUUC-Ate-010407	Aspergillus terreus	42.22	2.00e-08	53.10
IUUC-Ame-011482	Astyanax mexicanus	36.45	2.00e-35	142.00
IUUC-Bgr-012184	Blumeria graminis	47.50	6.00e-09	54.70
IUUC-Bta-013488	Bos taurus	36.55	2.00e-31	128.00
IUUC-Bci-013863	Botrytis cinerea	45.24	1.00e-09	57.40
IUUC-Cja-018959	Callithrix jacchus	32.06	2.00e-60	224.00
IUUC-Cfa-020275	Canis familiaris	32.14	5.00e-61	227.00
IUUC-Cpo-021997	Cavia porcellus	32.66	2.00e-57	215.00
IUUC-Csa-024058	Chlorocebus sabaeus	31.98	2.00e-60	224.00
IUUC-Cin-025585	Ciona intestinalis	34.72	1.00e-36	147.00
IUUC-Csv-026176	Ciona savignyi	30.26	5.00e-59	221.00
IUUC-Dre-027911	Danio rerio	35.65	1.00e-34	139.00
IUUC-Dno-028846	Dasypus novemcinctus	31.99	1.00e-60	226.00
IUUC-Dor-030929	Dipodomys ordii	33.33	2.00e-56	211.00
IUUC-Dme-032114	Drosophila melanogaster	40.24	2.00e-21	97.80
IUUC-Ete-032648	Echinops telfairi	36.26	2.00e-29	122.00
IUUC-Eca-034382	Equus caballus	32.82	3.00e-56	211.00
IUUC-Eeu-035027	Erinaceus europaeus	32.57	7.00e-57	213.00
IUUC-Fca-036040	Felis catus	31.31	2.00e-57	215.00
IUUC-Fal-037535	Ficedula albicollis	33.01	3.00e-64	238.00
IUUC-Fox-037887	Fusarium oxysporum	50.00	7.00e-11	61.20
IUUC-Fso-038253	Fusarium solani	50.00	8.00e-11	60.80
IUUC-Gmo-038527	Gadus morhua	35.35	9.00e-31	126.00
IUUC-Ggr-039838	Gaeumannomyces graminis	47.50	7.00e-11	61.20
IUUC-Gga-040769	Gallus gallus	32.03	1.00e-57	215.00
IUUC-Gac-042584	Gasterosteus aculeatus	31.86	2.00e-56	211.00
IUUC-Ggo-045145	Gorilla gorilla	32.66	6.00e-55	206.00
IUUC-Hsa-047029	Homo sapiens	32.06	3.00e-60	224.00
IUUC-Itr-047896	Ictidomys tridecemlineatus	32.06	1.00e-60	225.00
IUUC-Lch-050598	Latimeria chalumnae	39.13	1.00e-25	110.00
IUUC-Loc-052902	Lepisosteus oculatus	39.52	2.00e-37	149.00
IUUC-Laf-053764	Loxodonta africana	36.55	2.00e-32	132.00
IUUC-Mcc-055088	Macaca mulatta	32.06	2.00e-60	225.00
IUUC-Meu-056586	Macropus eugenii	42.45	7.00e-25	106.00
IUUC-Mga-059912	Meleagris gallopavo	32.06	9.00e-50	189.00
IUUC-Mmr-061508	Microcebus murinus	32.30	5.00e-61	227.00
IUUC-Mdo-062561	Monodelphis domestica	32.70	8.00e-61	226.00
IUUC-Mmu-063445	Mus musculus	32.06	9.00e-61	226.00
IUUC-Mpu-066775	Mustela putorius furo	32.15	1.00e-56	212.00
IUUC-Mlu-067747	Myotis lucifugus	33.33	2.00e-59	222.00
IUUC-Ncr-068647	Neurospora crassa	42.50	3.00e-09	55.80
IUUC-Nle-069553	Nomascus leucogenys	32.06	2.00e-60	225.00
IUUC-Opr-071037	Ochotona princeps	46.25	1.00e-23	101.00
IUUC-Ont-072137	Oreochromis niloticus	33.73	5.00e-64	237.00
IUUC-Oan-073733	Ornithorhynchus anatinus	32.35	3.00e-61	228.00
IUUC-Ocu-074802	Oryctolagus cuniculus	35.59	5.00e-35	140.00
IUUC-Ome-081954	Oryza meridionalis	33.33	4.00e-10	58.90
IUUC-Ola-086309	Oryzias latipes	38.97	6.00e-33	133.00
IUUC-Oga-088663	Otolemur garnettii	31.91	9.00e-61	226.00
IUUC-Oar-089478	Ovis aries	32.52	3.00e-63	234.00
IUUC-Ptr-091474	Pan troglodytes	32.06	3.00e-60	224.00
IUUC-Pan-092456	Papio anubis	31.98	5.00e-59	220.00
IUUC-Psi-093676	Pelodiscus sinensis	33.17	9.00e-62	229.00
IUUC-Pfo-096908	Poecilia formosa	37.26	1.00e-36	146.00
IUUC-Pab-097820	Pongo abelii	31.82	3.00e-60	224.00
IUUC-Pca-100174	Procavia capensis	31.41	1.00e-55	208.00
IUUC-Pva-102571	Pteropus vampyrus	30.31	1.00e-45	175.00
IUUC-Rno-105400	Rattus norvegicus	32.82	7.00e-57	213.00
IUUC-Sha-107024	Sarcophilus harrisii	32.62	8.00e-60	223.00
IUUC-Ssc-115799	Sus scrofa	35.98	5.00e-36	144.00
IUUC-Tgu-116658	Taeniopygia guttata	33.67	4.00e-60	223.00
IUUC-Tru-118269	Takifugu rubripes	34.55	2.00e-30	125.00
IUUC-Tsy-119389	Tarsius syrichta	30.95	8.00e-53	199.00
IUUC-Tni-119914	Tetraodon nigroviridis	31.51	1.00e-57	215.00
IUUC-Tre-121933	Trichoderma reesei	50.00	6.00e-11	61.20
IUUC-Tvi-122509	Trichoderma virens	50.00	1.00e-10	60.10
IUUC-Tbe-128154	Tupaia belangeri	35.71	2.00e-30	125.00
IUUC-Ttr-129016	Tursiops truncatus	36.73	2.00e-31	128.00
IUUC-Vda-129876	Verticillium dahliae	47.50	2.00e-09	56.60
IUUC-Xtr-132371	Xenopus tropicalis	33.88	1.00e-25	109.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence