iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000017933.4	ENSCAFT00000044682.2	ENSCAFP00000041051.1
ENSCAFG00000017933.4	ENSCAFT00000028468.3	ENSCAFP00000026477.3
ENSCAFG00000017933.4	ENSCAFT00000044728.1	ENSCAFP00000040007.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-26	90.3	497	534
UBD/Beta-Prp	1.50e-62	211.8	424	691

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           gH++ +tc+++   ++lvsG++D+++k WD+ tg++lk+
   Q: 497  GHQGTITCMDLyK-NRLVSGARDCQVKEWDIETGKCLKT 534
           8*********953.79********************986 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           +  +++l+a++s +++i++ dv + k l     gh + v+++ + +++++l++gs D  i+ wdl++g c+++++gh+ +++++++++ 
   Q: 424  Y-SGGDLVAVSS-NRKIQLLDVIQVKELPIEfRGHAGSVRTLFLCEEENFLLSGSYDLSIRFWDLKSGACIRIFNGHQGTITCMDLYK- 509
           4.5778888887.***********99876555********************************************************. PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
            ++lvsG +d  ++ wd+etg+cl+    +h++ +  +++++   ++vs++  + v++W + +++l++tl+g h+++v++l fd+   +
   Q: 510  -NRLVSGARDCQVKEWDIETGKCLK--TFKHKDPILATRIND--TYIVSSCERGLVKVWHIVMAQLVKTLSG-HEGAVKCLCFDQ--WH 590
           .***********************9..667888999999999..***************************9.************..8* PP
   S: 195  lvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           l+sgs dg v  w++    ++c+++++  ++ v+ v+++    r++s+ +Dg iri++  +g++lk+++  n +  +v  + +++n +v
   Q: 591  LLSGSADGLVMAWSMVgkYERCLMAFKHPKE-VLHVALL--FLRVISACADGKIRIYNFLNGNCLKVMKA-NGRGDPVLSFFIQGNRMV 675
           ***************9888999999986665.5556666..599***********************998.555555555566888888 PP
   S: 282  lgsedskvniwklkkne 298
             +e s++ ++++++++
   Q: 676  INTE-SNILMFQFENIK 691
           8877.688888888766 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MENLDSRLRN APYFRCEKGD SSVPVCQKCE TCVLAWKIFS TKEWFQRIGE VPQKRFLVSI 60
LKQLDSLYLL HYFQTILQTT QGKDFIYSRS RINLSRKEGK IVKSSLNQML DKTVEQKMRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGC TGGAGCTGAT GGCTCCAGGG CCACTGCCCG GGATCACCGC TCACTCTCTG 60
GCCACCGTCA GCTCAGACTC TGGGTCGGGC AGCCCGGCAG AAGAAGAGGA CCTGGGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001837	Ailuropoda melanoleuca	88.69	0.00e+00	813.00
IUUC-Apl-003572	Anas platyrhynchos	39.12	2.00e-157	550.00
IUUC-Aca-004297	Anolis carolinensis	39.36	0.00e+00	722.00
IUUC-Ame-011058	Astyanax mexicanus	39.26	8.00e-141	494.00
IUUC-Bta-012667	Bos taurus	76.69	0.00e+00	753.00
IUUC-Cja-019163	Callithrix jacchus	72.77	0.00e+00	1578.00
IUUC-Cpo-021429	Cavia porcellus	74.34	0.00e+00	717.00
IUUC-Csa-023597	Chlorocebus sabaeus	79.64	0.00e+00	1137.00
IUUC-Cho-024559	Choloepus hoffmanni	66.73	0.00e+00	693.00
IUUC-Dre-027496	Danio rerio	45.19	2.00e-116	412.00
IUUC-Dno-028995	Dasypus novemcinctus	75.71	0.00e+00	1600.00
IUUC-Ete-032823	Echinops telfairi	82.16	6.00e-96	345.00
IUUC-Eca-033666	Equus caballus	80.58	0.00e+00	1447.00
IUUC-Eeu-035054	Erinaceus europaeus	73.71	4.00e-101	362.00
IUUC-Fca-035589	Felis catus	81.27	0.00e+00	1714.00
IUUC-Fal-037403	Ficedula albicollis	38.37	5.00e-146	511.00
IUUC-Gmo-038669	Gadus morhua	33.09	2.00e-73	269.00
IUUC-Gga-041227	Gallus gallus	38.51	4.00e-156	545.00
IUUC-Ggo-044603	Gorilla gorilla	46.01	4.00e-83	303.00
IUUC-Hsa-046221	Homo sapiens	77.13	0.00e+00	1682.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	73.16	0.00e+00	1568.00
IUUC-Lch-050046	Latimeria chalumnae	38.34	0.00e+00	681.00
IUUC-Loc-052366	Lepisosteus oculatus	43.33	3.00e-164	572.00
IUUC-Laf-053745	Loxodonta africana	75.37	0.00e+00	1644.00
IUUC-Mcc-054826	Macaca mulatta	77.03	0.00e+00	1657.00
IUUC-Meu-056636	Macropus eugenii	46.26	2.00e-52	201.00
IUUC-Mga-060185	Meleagris gallopavo	38.19	9.00e-149	520.00
IUUC-Mdo-062382	Monodelphis domestica	54.89	0.00e+00	748.00
IUUC-Mmu-063623	Mus musculus	69.37	0.00e+00	1446.00
IUUC-Mpu-066872	Mustela putorius furo	81.88	0.00e+00	1501.00
IUUC-Mlu-067552	Myotis lucifugus	76.86	0.00e+00	714.00
IUUC-Nle-069247	Nomascus leucogenys	76.84	0.00e+00	1227.00
IUUC-Opr-070455	Ochotona princeps	73.33	0.00e+00	711.00
IUUC-Ont-071926	Oreochromis niloticus	35.01	2.00e-97	350.00
IUUC-Oan-073411	Ornithorhynchus anatinus	43.51	0.00e+00	810.00
IUUC-Ocu-073893	Oryctolagus cuniculus	71.44	0.00e+00	1294.00
IUUC-Oga-087937	Otolemur garnettii	77.38	0.00e+00	749.00
IUUC-Oar-089680	Ovis aries	73.06	0.00e+00	1574.00
IUUC-Ptr-091549	Pan troglodytes	72.68	0.00e+00	1552.00
IUUC-Pan-091904	Papio anubis	75.52	0.00e+00	1621.00
IUUC-Psi-093181	Pelodiscus sinensis	41.78	0.00e+00	820.00
IUUC-Pma-094711	Petromyzon marinus	44.70	6.00e-74	270.00
IUUC-Pab-098067	Pongo abelii	76.56	0.00e+00	1667.00
IUUC-Pca-100867	Procavia capensis	72.22	0.00e+00	854.00
IUUC-Pva-102209	Pteropus vampyrus	82.43	0.00e+00	1208.00
IUUC-Rno-105374	Rattus norvegicus	64.39	0.00e+00	1311.00
IUUC-Sha-107459	Sarcophilus harrisii	47.37	9.00e-112	397.00
IUUC-Tgu-117261	Taeniopygia guttata	43.98	5.00e-106	377.00
IUUC-Tru-117705	Takifugu rubripes	46.54	4.00e-42	163.00
IUUC-Tni-120365	Tetraodon nigroviridis	47.65	2.00e-40	159.00
IUUC-Tbe-128015	Tupaia belangeri	67.22	0.00e+00	1083.00
IUUC-Ttr-128654	Tursiops truncatus	75.18	0.00e+00	1103.00
IUUC-Vpa-130176	Vicugna pacos	69.66	0.00e+00	961.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence