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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006765
Ensembl Protein ID AT3G24010.1
UniProt Accession Q9LIQ6; Q84WD2; ING1_ARATH
Genbank Protein ID BAB03019.1; AEE76844.1; ABD94083.1; BAH30468.1; AAM67115.1; AAO42002.1
Protein Name PHD finger protein ING1; Protein INHIBITOR OF GROWTH 1
Genbank Nucleotide ID AP001297; CP002686; BT024927; AB493630; AY088805; BT003957
Gene Name ING1; At3g24010; F14O13.20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G24010 AT3G24010.1 AT3G24010.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 1.20e-08 35.9 179 225
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C + + +e  +v C++  C+ ewfH++C++l+   e+p+ + w+Cp+C 
   Q: 179  TYC-ICNQVSFGE--MVACDNnaCKiEWFHFGCVGLK---EQPKGK-WYCPECA 225
           69*.*******99..**********************...999997.******6 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
 Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
Protein Sequence
(Fasta)
MSFAEEFEAN LVSLAHVLQK KYALLRDLDK SLQENQRQNE QRCEKEIEDI RRGRAGNITP 60
NTSLTKFSEE ALDEQKHSVR IADEKVTLAM QAYDLVDMHV QQLDQYMKKS DEVIRKEKEA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006765|E3,PHD|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCAATACAAA ATAAGAAAAA GGCAAAAATA AAGAGTATTA CTGCAAATAT ATTTCTTTCA 60
TTTTGCAACA TATCCATTTT GGGAAACCCT AAATTCCCAA ATGTCATTCG CCGAGGAATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006765|E3,PHD|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0341--Growth regulation
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF12998--ING
SMART

SM01408--ING
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0035064--F:methylated histone binding
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification
GO:0040008--P:regulation of growth
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
KEGG ath:AT3G24010
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002275 Ailuropoda melanoleuca 65.28 6.00e-29 120.00
IUUC-Atr-002906 Amborella trichopoda 55.74 6.00e-72 262.00
IUUC-Apl-003660 Anas platyrhynchos 65.28 1.00e-28 119.00
IUUC-Aca-005206 Anolis carolinensis 65.28 7.00e-29 120.00
IUUC-Aly-005815 Arabidopsis lyrata 94.44 7.00e-92 328.00
IUUC-Acl-008091 Aspergillus clavatus 59.26 3.00e-18 86.30
IUUC-Ate-010297 Aspergillus terreus 61.11 5.00e-17 82.40
IUUC-Ame-011952 Astyanax mexicanus 63.89 4.00e-28 118.00
IUUC-Bta-012562 Bos taurus 65.28 5.00e-29 121.00
IUUC-Bdi-014504 Brachypodium distachyon 54.88 1.00e-68 251.00
IUUC-Bol-015245 Brassica oleracea 81.86 4.00e-91 326.00
IUUC-Bra-017027 Brassica rapa 82.28 8.00e-91 325.00
IUUC-Cel-018700 Caenorhabditis elegans 44.19 3.00e-05 43.50
IUUC-Cja-019646 Callithrix jacchus 65.28 6.00e-29 120.00
IUUC-Cfa-020874 Canis familiaris 65.28 6.00e-29 120.00
IUUC-Cpo-022530 Cavia porcellus 63.89 3.00e-28 119.00
IUUC-Cre-022920 Chlamydomonas reinhardtii 43.67 4.00e-27 114.00
IUUC-Csa-024232 Chlorocebus sabaeus 65.28 7.00e-29 120.00
IUUC-Cho-025039 Choloepus hoffmanni 62.50 4.00e-28 118.00
IUUC-Cin-025479 Ciona intestinalis 36.21 2.00e-33 135.00
IUUC-Cne-027005 Cryptococcus neoformans 48.98 1.00e-12 66.60
IUUC-Dre-027430 Danio rerio 30.51 2.00e-33 134.00
IUUC-Dno-029289 Dasypus novemcinctus 65.28 6.00e-29 120.00
IUUC-Dor-030315 Dipodomys ordii 76.36 2.00e-27 115.00
IUUC-Dme-032200 Drosophila melanogaster 65.08 3.00e-27 115.00
IUUC-Ete-032510 Echinops telfairi 65.28 2.00e-28 119.00
IUUC-Eca-033770 Equus caballus 65.28 6.00e-29 120.00
IUUC-Eeu-034948 Erinaceus europaeus 31.98 5.00e-31 127.00
IUUC-Fca-035661 Felis catus 65.28 5.00e-29 121.00
IUUC-Fal-037051 Ficedula albicollis 65.28 1.00e-28 120.00
IUUC-Fox-037925 Fusarium oxysporum 62.22 1.00e-17 83.60
IUUC-Gmo-039035 Gadus morhua 31.02 8.00e-33 132.00
IUUC-Gga-040794 Gallus gallus 65.28 1.00e-28 120.00
IUUC-Gac-042167 Gasterosteus aculeatus 64.29 6.00e-28 117.00
IUUC-Gma-044339 Glycine max 63.60 1.00e-78 285.00
IUUC-Ggo-044586 Gorilla gorilla 65.28 1.00e-28 119.00
IUUC-Hsa-046035 Homo sapiens 65.28 7.00e-29 120.00
IUUC-Hvu-047046 Hordeum vulgare 79.41 4.00e-33 134.00
IUUC-Itr-048783 Ictidomys tridecemlineatus 65.28 6.00e-29 120.00
IUUC-Kpa-049229 Komagataella pastoris 56.86 7.00e-17 80.10
IUUC-Lch-049419 Latimeria chalumnae 67.14 4.00e-29 122.00
IUUC-Lpe-050822 Leersia perrieri 52.23 1.00e-66 245.00
IUUC-Loc-052246 Lepisosteus oculatus 65.28 1.00e-28 120.00
IUUC-Laf-053617 Loxodonta africana 65.28 8.00e-29 120.00
IUUC-Mcc-055192 Macaca mulatta 65.28 7.00e-29 120.00
IUUC-Meu-056848 Macropus eugenii 65.28 2.00e-28 119.00
IUUC-Mtr-058089 Medicago truncatula 63.97 6.00e-75 272.00
IUUC-Mga-059899 Meleagris gallopavo 65.28 1.00e-28 119.00
IUUC-Mmr-061435 Microcebus murinus 65.28 6.00e-29 120.00
IUUC-Mdo-062452 Monodelphis domestica 76.36 5.00e-28 117.00
IUUC-Mmu-064032 Mus musculus 63.89 2.00e-28 119.00
IUUC-Mac-064625 Musa acuminata 60.00 1.00e-74 271.00
IUUC-Mpu-066530 Mustela putorius furo 65.28 5.00e-29 121.00
IUUC-Mlu-067790 Myotis lucifugus 65.28 7.00e-29 120.00
IUUC-Nle-070171 Nomascus leucogenys 65.28 7.00e-29 120.00
IUUC-Opr-070865 Ochotona princeps 65.28 3.00e-28 119.00
IUUC-Ont-072045 Oreochromis niloticus 65.71 4.00e-28 118.00
IUUC-Oan-073641 Ornithorhynchus anatinus 65.28 1.00e-28 120.00
IUUC-Ocu-074613 Oryctolagus cuniculus 65.28 6.00e-29 120.00
IUUC-Obr-076266 Oryza brachyantha 53.85 2.00e-67 247.00
IUUC-Ogl-077118 Oryza glaberrima 58.33 3.00e-34 137.00
IUUC-Oin-079049 Oryza indica 58.33 3.00e-34 137.00
IUUC-Ome-081291 Oryza meridionalis 58.33 3.00e-34 137.00
IUUC-Oni-082218 Oryza nivara 58.33 3.00e-34 137.00
IUUC-Opu-084171 Oryza punctata 48.56 6.00e-58 216.00
IUUC-Osa-085563 Oryza sativa 58.33 3.00e-34 137.00
IUUC-Ola-087103 Oryzias latipes 31.15 2.00e-30 125.00
IUUC-Olu-087851 Ostreococcus lucimarinus 27.98 8.00e-18 82.80
IUUC-Oga-088624 Otolemur garnettii 65.28 7.00e-29 120.00
IUUC-Oar-089442 Ovis aries 65.28 7.00e-29 120.00
IUUC-Ptr-091208 Pan troglodytes 65.28 7.00e-29 120.00
IUUC-Pan-092715 Papio anubis 65.28 7.00e-29 120.00
IUUC-Psi-093455 Pelodiscus sinensis 65.28 1.00e-28 119.00
IUUC-Pma-094144 Petromyzon marinus 69.70 2.00e-27 114.00
IUUC-Pab-097549 Pongo abelii 65.28 7.00e-29 120.00
IUUC-Pop-099415 Populus trichocarpa 61.48 4.00e-77 280.00
IUUC-Pca-100198 Procavia capensis 63.89 5.00e-27 114.00
IUUC-Ppe-101441 Prunus persica 64.71 2.00e-81 294.00
IUUC-Pva-102440 Pteropus vampyrus 65.28 6.00e-29 121.00
IUUC-Pte-104284 Pyrenophora teres 51.79 3.00e-16 80.10
IUUC-Pyt-104787 Pyrenophora triticirepentis 53.57 2.00e-16 80.50
IUUC-Rno-105964 Rattus norvegicus 76.36 9.00e-28 115.00
IUUC-Sha-107475 Sarcophilus harrisii 65.28 1.00e-28 120.00
IUUC-Smo-109441 Selaginella moellendorffii 39.66 1.00e-45 174.00
IUUC-Sit-109827 Setaria italica 54.51 5.00e-66 243.00
IUUC-Sly-111750 Solanum lycopersicum 65.55 4.00e-79 286.00
IUUC-Stu-112250 Solanum tuberosum 65.55 4.00e-79 286.00
IUUC-Sar-113193 Sorex araneus 65.28 6.00e-29 120.00
IUUC-Sbi-114826 Sorghum bicolor 53.28 1.00e-66 245.00
IUUC-Sre-115124 Sporisorium reilianum 64.29 5.00e-22 99.00
IUUC-Ssc-115795 Sus scrofa 65.28 7.00e-29 120.00
IUUC-Tgu-117305 Taeniopygia guttata 65.28 1.00e-28 119.00
IUUC-Tru-117691 Takifugu rubripes 65.71 3.00e-28 119.00
IUUC-Tsy-119035 Tarsius syrichta 65.28 1.00e-28 119.00
IUUC-Tni-120738 Tetraodon nigroviridis 63.89 2.00e-28 119.00
IUUC-Tca-121597 Theobroma cacao 66.26 3.00e-81 293.00
IUUC-Tvi-122341 Trichoderma virens 57.41 3.00e-15 73.60
IUUC-Tae-123043 Triticum aestivum 48.84 9.00e-60 222.00
IUUC-Tbe-127558 Tupaia belangeri 32.54 4.00e-32 130.00
IUUC-Ttr-128512 Tursiops truncatus 65.28 6.00e-29 120.00
IUUC-Uma-129581 Ustilago maydis 64.29 2.00e-22 100.00
IUUC-Vpa-130063 Vicugna pacos 67.86 1.00e-24 106.00
IUUC-Vvi-131487 Vitis vinifera 66.23 8.00e-78 282.00
IUUC-Xtr-132200 Xenopus tropicalis 78.18 2.00e-28 118.00
IUUC-Xma-133522 Xiphophorus maculatus 64.29 5.00e-28 117.00
IUUC-Yli-134326 Yarrowia lipolytica 58.06 1.00e-19 89.70
IUUC-Zma-135298 Zea mays 57.50 1.00e-33 135.00
Created Date 25-Jun-2017

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