iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074559

UUCD1 version

UUC-OrC-00339

Ensembl Protein ID

ENSOCUP00000008047.2

UniProt Accession

G1SX01; G1SX01_RABIT

Protein Name

Uncharacterized protein

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000009323.2	ENSOCUT00000009323.2	ENSOCUP00000008047.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.40e-13	50.6	183	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + +   dkLPLP +L+++L+++++
   Q: 183  LW-RPSKVLSLQDLCCRAVVSCTPVHLV---DKLPLPIALRSHLKSFSM 227
           67.99********************888...***************976 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSTLGSPVRA YDFLLKFLLV VDSDVGKGEI LASLQDGAAE SPYGHPVSID CKTTTILLDG 60
RRVKLQLWDA SGQGRFCTIF RSYSRGAQGV ILVYDIANRW SFDGINRWIK EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACCT TGGGGAGCCC AGTCCGGGCC TATGACTTCC TGCTCAAGTT CCTGCTGGTG 60
GTCGACAGCG ACGTGGGCAA GGGCGAGATC CTGGCCAGCC TGCAGGACGG CGCGGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	76.95	9.00e-123	432.00
IUUC-Apl-003206	Anas platyrhynchos	89.70	1.00e-126	445.00
IUUC-Aca-005004	Anolis carolinensis	85.50	5.00e-136	476.00
IUUC-Ame-011456	Astyanax mexicanus	83.09	2.00e-140	491.00
IUUC-Bta-012683	Bos taurus	88.49	1.00e-145	508.00
IUUC-Cja-018870	Callithrix jacchus	84.53	3.00e-136	477.00
IUUC-Cfa-020527	Canis familiaris	92.38	1.00e-114	405.00
IUUC-Cpo-021644	Cavia porcellus	92.91	8.00e-147	512.00
IUUC-Csa-023150	Chlorocebus sabaeus	93.88	9.00e-156	542.00
IUUC-Cho-024716	Choloepus hoffmanni	91.46	7.00e-88	315.00
IUUC-Dre-028614	Danio rerio	81.72	3.00e-137	480.00
IUUC-Dno-029998	Dasypus novemcinctus	72.88	1.00e-98	355.00
IUUC-Dor-030584	Dipodomys ordii	67.38	2.00e-90	324.00
IUUC-Dme-031810	Drosophila melanogaster	56.36	4.00e-89	320.00
IUUC-Ete-033080	Echinops telfairi	81.01	9.00e-121	426.00
IUUC-Eca-033492	Equus caballus	93.04	2.00e-128	451.00
IUUC-Eeu-034590	Erinaceus europaeus	70.69	1.00e-94	338.00
IUUC-Fca-035705	Felis catus	92.17	5.00e-126	442.00
IUUC-Fal-037070	Ficedula albicollis	75.09	2.00e-126	444.00
IUUC-Gmo-039605	Gadus morhua	77.78	3.00e-135	473.00
IUUC-Gga-040925	Gallus gallus	88.13	9.00e-148	515.00
IUUC-Gac-041833	Gasterosteus aculeatus	72.73	2.00e-127	447.00
IUUC-Ggo-045498	Gorilla gorilla	83.45	4.00e-129	453.00
IUUC-Hsa-046747	Homo sapiens	93.53	5.00e-155	539.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	75.44	4.00e-126	443.00
IUUC-Lch-050193	Latimeria chalumnae	78.06	9.00e-137	479.00
IUUC-Loc-052325	Lepisosteus oculatus	85.30	1.00e-144	505.00
IUUC-Laf-053340	Loxodonta africana	89.21	2.00e-147	514.00
IUUC-Mcc-054711	Macaca mulatta	91.81	5.00e-152	529.00
IUUC-Meu-056731	Macropus eugenii	68.86	1.00e-65	242.00
IUUC-Mga-059204	Meleagris gallopavo	88.13	2.00e-147	514.00
IUUC-Mmr-061380	Microcebus murinus	75.63	1.00e-125	442.00
IUUC-Mdo-062438	Monodelphis domestica	74.38	2.00e-125	441.00
IUUC-Mmu-064144	Mus musculus	90.65	2.00e-152	531.00
IUUC-Mpu-066352	Mustela putorius furo	93.04	1.00e-126	445.00
IUUC-Mlu-067741	Myotis lucifugus	75.80	9.00e-127	446.00
IUUC-Nle-070096	Nomascus leucogenys	92.81	3.00e-153	533.00
IUUC-Opr-070662	Ochotona princeps	90.29	9.00e-149	518.00
IUUC-Ont-072397	Oreochromis niloticus	83.16	5.00e-138	483.00
IUUC-Oan-073432	Ornithorhynchus anatinus	74.57	3.00e-103	367.00
IUUC-Olo-080270	Oryza longistaminata	34.09	2.00e-11	63.50
IUUC-Oni-082023	Oryza nivara	28.42	3.20e+00	27.30
IUUC-Ola-086486	Oryzias latipes	74.63	2.00e-123	434.00
IUUC-Oga-088133	Otolemur garnettii	92.09	4.00e-153	533.00
IUUC-Oar-089702	Ovis aries	88.26	6.00e-120	422.00
IUUC-Ptr-090544	Pan troglodytes	93.87	2.00e-145	508.00
IUUC-Pan-092812	Papio anubis	93.88	9.00e-156	542.00
IUUC-Psi-093120	Pelodiscus sinensis	88.49	4.00e-149	520.00
IUUC-Pma-094679	Petromyzon marinus	76.60	7.00e-110	389.00
IUUC-Pfo-096238	Poecilia formosa	79.72	1.00e-130	459.00
IUUC-Pab-098735	Pongo abelii	93.88	9.00e-156	542.00
IUUC-Pca-100775	Procavia capensis	81.88	6.00e-77	279.00
IUUC-Pva-102361	Pteropus vampyrus	87.41	1.00e-136	478.00
IUUC-Rno-105063	Rattus norvegicus	92.09	1.00e-154	538.00
IUUC-Sha-106536	Sarcophilus harrisii	74.38	2.00e-125	441.00
IUUC-Sar-113518	Sorex araneus	85.55	2.00e-127	448.00
IUUC-Ssc-115719	Sus scrofa	88.43	5.00e-141	493.00
IUUC-Tgu-116858	Taeniopygia guttata	81.35	5.00e-96	342.00
IUUC-Tru-118264	Takifugu rubripes	64.97	1.00e-124	439.00
IUUC-Tsy-119011	Tarsius syrichta	92.63	2.00e-104	370.00
IUUC-Tni-120350	Tetraodon nigroviridis	78.49	7.00e-136	476.00
IUUC-Ttr-129236	Tursiops truncatus	75.80	1.00e-127	448.00
IUUC-Xtr-132079	Xenopus tropicalis	87.05	7.00e-147	512.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence