iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048404

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01111610

Gene Name

TRIM39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000001671.2	ENSSTOT00000001668.2	ENSSTOP00000001495.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-08	34.2	29	70
E3 activity/RING/U-box	7.00e-08	32.4	27	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +k+ p++  CgH f++ C+ +w        + f CP+Cr
   Q: 29   CSVCLEYLKE-PVIIECGHNFCKACITRW---WEDLERDFPCPVCR 70
           ********99.999************999...666889999****8 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrl 64
             C++ le  ++Pv++++G+ + +++I +w ++ ++   cPv+r++ + ++l Pn  l ++
   Q: 27   ASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERdfPCPVCRKTSRYRSLRPNRQLGSM 87
           68*****************************88887799****************998666 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK ACITRWWEDL 60
ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQAVKRK IRDESLCPQH HEALSLFCYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAGA CAAGCCTGTT AGAGGCCGGG GCCTCTGCAG CCTCCACAGC TGCAGCTCTG 60
GAGAACTTAC AAGTTGAGGC AAGCTGCTCT GTGTGCCTGG AGTATCTGAA GGAGCCTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0008270--F:zinc ion binding
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2001235--P:positive regulation of apoptotic signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001603	Ailuropoda melanoleuca	97.38	0.00e+00	952.00
IUUC-Apl-003354	Anas platyrhynchos	42.83	7.00e-107	380.00
IUUC-Aca-005381	Anolis carolinensis	70.06	0.00e+00	676.00
IUUC-Bta-012554	Bos taurus	95.17	6.00e-157	546.00
IUUC-Cja-019323	Callithrix jacchus	97.47	0.00e+00	929.00
IUUC-Cfa-020342	Canis familiaris	97.47	0.00e+00	949.00
IUUC-Cpo-022084	Cavia porcellus	93.79	2.00e-154	538.00
IUUC-Csa-023186	Chlorocebus sabaeus	97.68	0.00e+00	951.00
IUUC-Cho-024697	Choloepus hoffmanni	85.26	0.00e+00	845.00
IUUC-Csv-026245	Ciona savignyi	38.81	2.00e-11	62.00
IUUC-Dor-031021	Dipodomys ordii	87.50	2.00e-145	508.00
IUUC-Ete-032936	Echinops telfairi	84.52	3.00e-150	523.00
IUUC-Eca-033687	Equus caballus	95.52	3.00e-157	547.00
IUUC-Eeu-034957	Erinaceus europaeus	95.61	5.00e-129	454.00
IUUC-Fca-035406	Felis catus	97.47	0.00e+00	949.00
IUUC-Fal-036705	Ficedula albicollis	45.69	1.00e-97	350.00
IUUC-Gmo-038505	Gadus morhua	35.99	6.00e-74	271.00
IUUC-Gac-041919	Gasterosteus aculeatus	35.58	3.00e-70	258.00
IUUC-Ggo-044526	Gorilla gorilla	91.88	0.00e+00	935.00
IUUC-Hsa-045719	Homo sapiens	91.88	0.00e+00	936.00
IUUC-Lch-049787	Latimeria chalumnae	40.64	2.00e-87	315.00
IUUC-Loc-052206	Lepisosteus oculatus	38.69	1.00e-86	313.00
IUUC-Laf-054295	Loxodonta africana	96.44	0.00e+00	945.00
IUUC-Mcc-055765	Macaca mulatta	93.17	0.00e+00	938.00
IUUC-Meu-055997	Macropus eugenii	60.40	4.00e-128	451.00
IUUC-Mmr-061030	Microcebus murinus	95.24	0.00e+00	665.00
IUUC-Mdo-062936	Monodelphis domestica	89.86	0.00e+00	854.00
IUUC-Mmu-063767	Mus musculus	96.42	0.00e+00	937.00
IUUC-Mpu-066160	Mustela putorius furo	97.38	0.00e+00	952.00
IUUC-Mlu-068126	Myotis lucifugus	92.41	2.00e-152	531.00
IUUC-Nle-070041	Nomascus leucogenys	87.42	0.00e+00	806.00
IUUC-Opr-070394	Ochotona princeps	91.63	0.00e+00	928.00
IUUC-Ont-071285	Oreochromis niloticus	35.59	6.00e-76	277.00
IUUC-Oan-072828	Ornithorhynchus anatinus	56.99	2.00e-161	561.00
IUUC-Ocu-073980	Oryctolagus cuniculus	94.96	0.00e+00	684.00
IUUC-Oga-088422	Otolemur garnettii	94.82	0.00e+00	920.00
IUUC-Oar-089277	Ovis aries	92.21	0.00e+00	872.00
IUUC-Ptr-090853	Pan troglodytes	91.88	0.00e+00	935.00
IUUC-Pan-091993	Papio anubis	97.68	0.00e+00	951.00
IUUC-Psi-092975	Pelodiscus sinensis	73.86	0.00e+00	642.00
IUUC-Pma-094519	Petromyzon marinus	26.59	4.00e-28	118.00
IUUC-Pfo-096831	Poecilia formosa	32.92	6.00e-69	254.00
IUUC-Pab-097944	Pongo abelii	97.68	0.00e+00	951.00
IUUC-Pca-100795	Procavia capensis	85.29	7.00e-175	606.00
IUUC-Pva-103180	Pteropus vampyrus	90.73	0.00e+00	919.00
IUUC-Rno-105736	Rattus norvegicus	97.89	0.00e+00	960.00
IUUC-Sha-107411	Sarcophilus harrisii	52.40	7.00e-147	513.00
IUUC-Sar-113371	Sorex araneus	87.86	0.00e+00	739.00
IUUC-Ssc-116025	Sus scrofa	97.89	0.00e+00	952.00
IUUC-Tgu-116998	Taeniopygia guttata	46.49	2.00e-100	358.00
IUUC-Tru-117532	Takifugu rubripes	33.75	2.00e-71	263.00
IUUC-Tsy-119072	Tarsius syrichta	83.69	1.00e-176	611.00
IUUC-Tni-120490	Tetraodon nigroviridis	33.26	1.00e-73	270.00
IUUC-Tbe-127820	Tupaia belangeri	87.62	4.00e-140	491.00
IUUC-Ttr-128310	Tursiops truncatus	96.07	1.00e-130	459.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence