iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131262

Ensembl Protein ID

VIT_07s0005g00240.t01

UniProt Accession

A5APC1; A5APC1_VITVI

Genbank Protein ID

CAN75889.1; CCB59951.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM431356; FN596502

Gene Name

VIT_07s0005g00240; VITISV_023641

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0005g00240	VIT_07s0005g00240.t01	VIT_07s0005g00240.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-12	45.9	71	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  ++ ++f    ++++l s+s Dgti+ WD+rt+++
   Q: 71   GHSTTINHISFsgpgNSHILHSCSSDGTIRAWDTRTFNQ 109
           8999*********7544999***************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDAMEEEEPQ PNPNSLKRFA LKNSIQTNFG DDYVFQIVAR DDWTAMAVSL STNAVKLYSP 60
VTGQYLGECR GHSTTINHIS FSGPGNSHIL HSCSSDGTIR AWDTRTFNQV LCISAGSSQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGCTCTT CTTCGCCTTC GATTACTTTA CCTCAGAGAA ACAGGGAGAG AGTAATGGAA 60
ACCACAGAGA TGGATGCAAT GGAAGAGGAA GAACCTCAGC CCAATCCAAA CTCATTAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0040008--P:regulation of growth
GO:0010029--P:regulation of seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000596	Aegilops tauschii	61.99	2.00e-138	484.00
IUUC-Aml-001254	Ailuropoda melanoleuca	27.93	2.00e-28	119.00
IUUC-Atr-003047	Amborella trichopoda	63.87	7.00e-123	432.00
IUUC-Apl-003479	Anas platyrhynchos	31.90	2.00e-32	132.00
IUUC-Aca-004537	Anolis carolinensis	29.66	3.00e-29	121.00
IUUC-Aly-006050	Arabidopsis lyrata	68.90	2.00e-144	504.00
IUUC-Ath-007363	Arabidopsis thaliana	68.82	3.00e-144	503.00
IUUC-Ago-007711	Ashbya gossypii	27.08	3.00e-16	78.60
IUUC-Ani-009327	Aspergillus nidulans	31.54	1.00e-11	63.20
IUUC-Ang-009652	Aspergillus niger	27.39	6.00e-10	57.40
IUUC-Aor-009897	Aspergillus oryzae	30.77	9.00e-12	63.20
IUUC-Ame-011078	Astyanax mexicanus	28.69	7.00e-24	103.00
IUUC-Bgr-012252	Blumeria graminis	26.45	3.00e-15	74.70
IUUC-Bta-012703	Bos taurus	26.98	3.00e-26	111.00
IUUC-Bci-013979	Botrytis cinerea	24.65	8.00e-11	60.10
IUUC-Bdi-014266	Brachypodium distachyon	62.02	1.00e-128	451.00
IUUC-Bol-015632	Brassica oleracea	68.78	7.00e-77	278.00
IUUC-Bra-016730	Brassica rapa	67.29	5.00e-140	489.00
IUUC-Cja-019235	Callithrix jacchus	29.85	9.00e-30	123.00
IUUC-Cfa-020750	Canis familiaris	28.46	9.00e-27	113.00
IUUC-Cpo-021566	Cavia porcellus	28.41	2.00e-26	112.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	30.07	2.00e-12	69.30
IUUC-Csa-023742	Chlorocebus sabaeus	29.63	3.00e-28	118.00
IUUC-Cho-024447	Choloepus hoffmanni	30.92	6.00e-21	94.40
IUUC-Cgl-026483	Colletotrichum gloeosporioides	25.09	1.00e-09	56.20
IUUC-Dre-028760	Danio rerio	29.15	5.00e-29	120.00
IUUC-Dno-028909	Dasypus novemcinctus	28.87	2.00e-28	119.00
IUUC-Dor-030224	Dipodomys ordii	31.58	1.00e-22	99.00
IUUC-Dse-031410	Dothistroma septosporum	27.17	5.00e-14	70.90
IUUC-Dme-031947	Drosophila melanogaster	21.67	2.00e-13	68.90
IUUC-Eca-034117	Equus caballus	28.18	3.00e-28	118.00
IUUC-Eeu-035227	Erinaceus europaeus	28.61	1.00e-30	125.00
IUUC-Fca-036221	Felis catus	28.80	5.00e-29	120.00
IUUC-Fal-037285	Ficedula albicollis	30.00	4.00e-25	108.00
IUUC-Fox-037865	Fusarium oxysporum	31.84	5.00e-12	64.30
IUUC-Fso-038466	Fusarium solani	26.98	2.00e-10	58.90
IUUC-Ggr-040120	Gaeumannomyces graminis	24.00	8.00e-14	70.50
IUUC-Gga-041255	Gallus gallus	30.77	7.00e-31	127.00
IUUC-Gma-042965	Glycine max	73.68	4.00e-172	596.00
IUUC-Ggo-045118	Gorilla gorilla	29.54	2.00e-29	122.00
IUUC-Hsa-046961	Homo sapiens	30.15	1.00e-29	122.00
IUUC-Hvu-047219	Hordeum vulgare	61.97	2.00e-139	487.00
IUUC-Itr-048310	Ictidomys tridecemlineatus	28.36	4.00e-29	121.00
IUUC-Kpa-049122	Komagataella pastoris	26.53	4.00e-15	74.70
IUUC-Lch-050390	Latimeria chalumnae	29.56	4.00e-23	101.00
IUUC-Loc-052076	Lepisosteus oculatus	29.81	3.00e-25	108.00
IUUC-Lma-053270	Leptosphaeria maculans	30.00	7.00e-12	63.90
IUUC-Laf-054241	Loxodonta africana	28.65	1.00e-30	126.00
IUUC-Mcc-055445	Macaca mulatta	29.97	4.00e-30	124.00
IUUC-Meu-056701	Macropus eugenii	31.44	2.00e-18	84.70
IUUC-Mor-056911	Magnaporthe oryzae	27.11	1.00e-14	73.20
IUUC-Mpo-057525	Magnaporthe poae	29.31	4.00e-12	64.70
IUUC-Mtr-058036	Medicago truncatula	72.70	4.00e-168	583.00
IUUC-Mla-058923	Melampsora laricipopulina	27.89	2.00e-16	79.00
IUUC-Mga-059779	Meleagris gallopavo	30.56	4.00e-31	127.00
IUUC-Mvi-060394	Microbotryum violaceum	26.96	1.00e-15	76.60
IUUC-Mmr-061573	Microcebus murinus	28.36	4.00e-29	121.00
IUUC-Mdo-062961	Monodelphis domestica	29.37	2.00e-31	129.00
IUUC-Mmu-063554	Mus musculus	28.66	9.00e-29	120.00
IUUC-Mac-064862	Musa acuminata	65.68	4.00e-144	503.00
IUUC-Mpu-066725	Mustela putorius furo	28.19	1.00e-26	113.00
IUUC-Mlu-067095	Myotis lucifugus	27.76	3.00e-29	122.00
IUUC-Nfi-068488	Neosartorya fischeri	28.66	2.00e-10	59.30
IUUC-Ncr-068709	Neurospora crassa	27.45	4.00e-12	64.70
IUUC-Nle-069614	Nomascus leucogenys	29.36	2.00e-28	118.00
IUUC-Opr-070604	Ochotona princeps	28.38	3.00e-28	118.00
IUUC-Ont-071684	Oreochromis niloticus	32.56	2.00e-32	132.00
IUUC-Oan-073074	Ornithorhynchus anatinus	32.11	4.00e-32	130.00
IUUC-Ocu-074393	Oryctolagus cuniculus	27.85	1.00e-27	116.00
IUUC-Oba-075342	Oryza barthii	62.13	7.00e-124	436.00
IUUC-Obr-076370	Oryza brachyantha	64.31	9.00e-135	472.00
IUUC-Ogl-077049	Oryza glaberrima	63.49	2.00e-128	451.00
IUUC-Ogu-078466	Oryza glumaepatula	62.40	5.00e-124	436.00
IUUC-Oin-080214	Oryza indica	55.86	8.00e-102	362.00
IUUC-Olo-080978	Oryza longistaminata	55.86	8.00e-102	362.00
IUUC-Ome-081321	Oryza meridionalis	60.27	2.00e-119	421.00
IUUC-Oni-082345	Oryza nivara	62.13	1.00e-123	435.00
IUUC-Opu-083337	Oryza punctata	62.13	6.00e-124	436.00
IUUC-Oru-085094	Oryza rufipogon	62.40	5.00e-124	436.00
IUUC-Osa-085382	Oryza sativa	64.89	2.00e-60	224.00
IUUC-Ola-087540	Oryzias latipes	33.64	4.00e-33	134.00
IUUC-Oga-088329	Otolemur garnettii	28.11	4.00e-26	111.00
IUUC-Oar-089413	Ovis aries	27.25	2.00e-26	112.00
IUUC-Ptr-090534	Pan troglodytes	29.54	9.00e-30	123.00
IUUC-Pan-092581	Papio anubis	29.32	2.00e-28	119.00
IUUC-Psi-093812	Pelodiscus sinensis	28.46	6.00e-32	130.00
IUUC-Ppa-095712	Physcomitrella patens	49.22	3.00e-99	354.00
IUUC-Pab-098114	Pongo abelii	29.54	3.00e-29	121.00
IUUC-Pop-099394	Populus trichocarpa	74.22	2.00e-164	570.00
IUUC-Pca-100968	Procavia capensis	28.44	6.00e-28	117.00
IUUC-Ppe-101385	Prunus persica	69.79	3.00e-136	476.00
IUUC-Pva-102164	Pteropus vampyrus	28.00	1.00e-26	113.00
IUUC-Pgr-103524	Puccinia graminis	26.41	7.00e-15	73.90
IUUC-Ptt-103863	Puccinia triticina	28.70	2.00e-11	62.00
IUUC-Rno-105066	Rattus norvegicus	29.01	2.00e-29	122.00
IUUC-Sce-106334	Saccharomyces cerevisiae	29.81	5.00e-13	67.80
IUUC-Sha-107540	Sarcophilus harrisii	30.84	3.00e-28	118.00
IUUC-Sja-107890	Schizosaccharomyces japonicus	26.57	3.00e-16	78.20
IUUC-Spo-108342	Schizosaccharomyces pombe	23.08	3.00e-11	61.60
IUUC-Smo-108737	Selaginella moellendorffii	51.87	1.00e-94	338.00
IUUC-Sit-110267	Setaria italica	61.05	6.00e-140	489.00
IUUC-Sly-111439	Solanum lycopersicum	67.10	2.00e-154	537.00
IUUC-Stu-112664	Solanum tuberosum	67.36	6.00e-153	532.00
IUUC-Sar-113388	Sorex araneus	26.56	9.00e-27	113.00
IUUC-Sbi-114679	Sorghum bicolor	64.75	7.00e-137	479.00
IUUC-Sre-115113	Sporisorium reilianum	23.63	4.00e-07	48.50
IUUC-Ssc-115311	Sus scrofa	28.31	2.00e-30	125.00
IUUC-Tgu-116672	Taeniopygia guttata	30.06	3.00e-25	108.00
IUUC-Tru-117689	Takifugu rubripes	29.56	2.00e-31	129.00
IUUC-Tsy-119627	Tarsius syrichta	27.11	6.00e-27	114.00
IUUC-Tni-120137	Tetraodon nigroviridis	30.18	2.00e-30	125.00
IUUC-Tca-120958	Theobroma cacao	77.31	3.00e-177	613.00
IUUC-Tre-122133	Trichoderma reesei	30.25	1.00e-11	63.20
IUUC-Tvi-122387	Trichoderma virens	26.12	9.00e-12	63.50
IUUC-Tae-122917	Triticum aestivum	60.26	6.00e-139	486.00
IUUC-Ttr-128539	Tursiops truncatus	28.26	2.00e-28	119.00
IUUC-Vpa-130315	Vicugna pacos	27.97	3.00e-26	112.00
IUUC-Xtr-132190	Xenopus tropicalis	28.16	3.00e-27	115.00
IUUC-Yli-134492	Yarrowia lipolytica	26.64	2.00e-13	69.30
IUUC-Zma-135832	Zea mays	64.48	2.00e-136	477.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence